RNA–Protein interactions for RNA: ENST00000368518.5

C1orf43-204, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-204ENST00000368518 PPP2R2DQ66LE6 453 aa20.39■□□□□ 0.85
C1orf43-204ENST00000368518 KCNV1Q6PIU1 500 aa20.39■□□□□ 0.85
C1orf43-204ENST00000368518 SESTD1Q86VW0 696 aa20.39■□□□□ 0.85
C1orf43-204ENST00000368518 RAB11FIP4Q86YS3 637 aa20.39■□□□□ 0.85
C1orf43-204ENST00000368518 RRP36Q96EU6 259 aaKnown RBP20.39■□□□□ 0.85
C1orf43-204ENST00000368518 KATNAL1Q9BW62 490 aa20.39■□□□□ 0.85
C1orf43-204ENST00000368518 GTF2IRD1Q9UHL9 959 aa20.39■□□□□ 0.85
C1orf43-204ENST00000368518 CCDC69A6NI79 296 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 DDAH1O94760 285 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 PLEKHA8P1O95397 391 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 KIF5BP33176 963 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 MCM5P33992 734 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 ZNF200P98182 395 aaPredicted RBP20.38■□□□□ 0.85
C1orf43-204ENST00000368518 ADGRE1Q14246 886 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 CMTR1Q8N1G2 835 aaKnown RBP20.38■□□□□ 0.85
C1orf43-204ENST00000368518 CAGE1Q8TC20 777 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 DHX38Q92620 1227 aaKnown RBP20.38■□□□□ 0.85
C1orf43-204ENST00000368518 LRRC2Q9BYS8 371 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 BCAS3Q9H6U6 928 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 MLXIPQ9HAP2 919 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 ANO2Q9NQ90 1003 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 RTEL1Q9NZ71 1219 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 PCDHA11Q9Y5I1 949 aa20.38■□□□□ 0.85
C1orf43-204ENST00000368518 MYO9BQ13459 2157 aa20.37■□□□□ 0.85
C1orf43-204ENST00000368518 SH2B2O14492 632 aaPredicted RBP20.37■□□□□ 0.85
C1orf43-204ENST00000368518 F2P00734 622 aa20.37■□□□□ 0.85
C1orf43-204ENST00000368518 CCDC85BQ15834 202 aaPredicted RBP20.37■□□□□ 0.85
C1orf43-204ENST00000368518 CREB3L3Q68CJ9 461 aa20.37■□□□□ 0.85
C1orf43-204ENST00000368518 USP17L6PQ6QN14 398 aa20.37■□□□□ 0.85
C1orf43-204ENST00000368518 SMARCC2Q8TAQ2 1214 aa20.37■□□□□ 0.85
C1orf43-204ENST00000368518 AFAP1L1Q8TED9 768 aa20.37■□□□□ 0.85
C1orf43-204ENST00000368518 MAP3K14Q99558 947 aa20.37■□□□□ 0.85
C1orf43-204ENST00000368518 SPZ1Q9BXG8 430 aa20.37■□□□□ 0.85
C1orf43-204ENST00000368518 PRDM6Q9NQX0 595 aa20.37■□□□□ 0.85
C1orf43-204ENST00000368518 SEC63Q9UGP8 760 aaKnown RBP20.37■□□□□ 0.85
C1orf43-204ENST00000368518 HAS3O00219 553 aa20.36■□□□□ 0.85
C1orf43-204ENST00000368518 PPFIA4O75335 1185 aa20.36■□□□□ 0.85
C1orf43-204ENST00000368518 TGFB3P10600 412 aa20.36■□□□□ 0.85
C1orf43-204ENST00000368518 CKBP12277 381 aa20.36■□□□□ 0.85
C1orf43-204ENST00000368518 SELPP16109 830 aa20.36■□□□□ 0.85
C1orf43-204ENST00000368518 MRPS9P82933 396 aaKnown RBP20.36■□□□□ 0.85
C1orf43-204ENST00000368518 LRRC8DQ7L1W4 858 aa20.36■□□□□ 0.85
C1orf43-204ENST00000368518 SRBD1Q8N5C6 995 aaKnown RBP20.36■□□□□ 0.85
C1orf43-204ENST00000368518 CUL5Q93034 780 aa20.36■□□□□ 0.85
C1orf43-204ENST00000368518 TMEM87BQ96K49 555 aa20.36■□□□□ 0.85
C1orf43-204ENST00000368518 TET1Q8NFU7 2136 aa20.35■□□□□ 0.85
C1orf43-204ENST00000368518 hCG_1642624A0A1W2PR95 340 aa20.35■□□□□ 0.85
C1orf43-204ENST00000368518 CA3P07451 260 aa20.35■□□□□ 0.85
C1orf43-204ENST00000368518 HOXD8P13378 290 aaPredicted RBP20.35■□□□□ 0.85
C1orf43-204ENST00000368518 NECTIN1Q15223 517 aa20.35■□□□□ 0.85
C1orf43-204ENST00000368518 TMTC2Q8N394 836 aa20.35■□□□□ 0.85
C1orf43-204ENST00000368518 CCDC82Q8N4S0 544 aa20.35■□□□□ 0.85
C1orf43-204ENST00000368518 SLC9A7Q96T83 725 aa20.35■□□□□ 0.85
C1orf43-204ENST00000368518 LZTS2Q9BRK4 669 aa20.35■□□□□ 0.85
C1orf43-204ENST00000368518 CERS4Q9HA82 394 aa20.35■□□□□ 0.85
C1orf43-204ENST00000368518 GNAQP50148 359 aa20.34■□□□□ 0.85
C1orf43-204ENST00000368518 HIC1Q14526 733 aa20.34■□□□□ 0.85
C1orf43-204ENST00000368518 GPNMBQ14956 572 aa20.34■□□□□ 0.85
C1orf43-204ENST00000368518 GNPTABQ3T906 1256 aa20.34■□□□□ 0.85
C1orf43-204ENST00000368518 CYFIP1Q7L576 1253 aa20.34■□□□□ 0.85
C1orf43-204ENST00000368518 WNT8BQ93098 351 aa20.34■□□□□ 0.85
C1orf43-204ENST00000368518 MTA3Q9BTC8 594 aa20.34■□□□□ 0.85
C1orf43-204ENST00000368518 SLC12A7Q9Y666 1083 aa20.34■□□□□ 0.85
C1orf43-204ENST00000368518 FRMPD4Q14CM0 1322 aa20.33■□□□□ 0.85
C1orf43-204ENST00000368518 NOP56O00567 594 aaKnown RBP20.33■□□□□ 0.85
C1orf43-204ENST00000368518 NBNO60934 754 aa20.33■□□□□ 0.85
C1orf43-204ENST00000368518 KCNJ6P48051 423 aa20.33■□□□□ 0.85
C1orf43-204ENST00000368518 PTK7Q13308 1070 aa20.33■□□□□ 0.85
C1orf43-204ENST00000368518 TMCO2Q7Z6W1 182 aaPredicted RBP20.33■□□□□ 0.85
C1orf43-204ENST00000368518 HERC6Q8IVU3 1022 aa20.33■□□□□ 0.85
C1orf43-204ENST00000368518 MICALL1Q8N3F8 863 aa20.33■□□□□ 0.85
C1orf43-204ENST00000368518 C16orf70Q9BSU1 422 aa20.33■□□□□ 0.85
C1orf43-204ENST00000368518 DOCK5Q9H7D0 1870 aa20.33■□□□□ 0.84
C1orf43-204ENST00000368518 SPTBN5Q9NRC6 3674 aaKnown RBP20.32■□□□□ 0.84
C1orf43-204ENST00000368518 SPATA31C2B4DYI2 1134 aa20.32■□□□□ 0.84
C1orf43-204ENST00000368518 RFXAPO00287 272 aa20.32■□□□□ 0.84
C1orf43-204ENST00000368518 MEIS2O14770 477 aa20.32■□□□□ 0.84
C1orf43-204ENST00000368518 STAM2O75886 525 aa20.32■□□□□ 0.84
C1orf43-204ENST00000368518 BAIAP3O94812 1187 aa20.32■□□□□ 0.84
C1orf43-204ENST00000368518 SMARCA1P28370 1054 aa20.32■□□□□ 0.84
C1orf43-204ENST00000368518 LIFRP42702 1097 aa20.32■□□□□ 0.84
C1orf43-204ENST00000368518 SP4Q02446 784 aa20.32■□□□□ 0.84
C1orf43-204ENST00000368518 SEMA3FQ13275 785 aa20.32■□□□□ 0.84
C1orf43-204ENST00000368518 TCTN1Q2MV58 587 aa20.32■□□□□ 0.84
C1orf43-204ENST00000368518 ZNF618Q5T7W0 954 aa20.32■□□□□ 0.84
C1orf43-204ENST00000368518 PHOSPHO2Q8TCD6 241 aa20.32■□□□□ 0.84
C1orf43-204ENST00000368518 INPP4AQ96PE3 977 aaPredicted RBP20.32■□□□□ 0.84
C1orf43-204ENST00000368518 TRANK1O15050 2925 aa20.31■□□□□ 0.84
C1orf43-204ENST00000368518 H3BRB1 525 aa20.31■□□□□ 0.84
C1orf43-204ENST00000368518 FIBPO43427 364 aa20.31■□□□□ 0.84
C1orf43-204ENST00000368518 LGALS2P05162 132 aa20.31■□□□□ 0.84
C1orf43-204ENST00000368518 CALM1P0DP23 149 aa20.31■□□□□ 0.84
C1orf43-204ENST00000368518 CALM2P0DP24 149 aa20.31■□□□□ 0.84
C1orf43-204ENST00000368518 CALM3P0DP25 149 aa20.31■□□□□ 0.84
C1orf43-204ENST00000368518 ICAM3P32942 547 aa20.31■□□□□ 0.84
C1orf43-204ENST00000368518 WDR5P61964 334 aaKnown RBP20.31■□□□□ 0.84
C1orf43-204ENST00000368518 RBL2Q08999 1139 aa20.31■□□□□ 0.84
C1orf43-204ENST00000368518 NEDD9Q14511 834 aa20.31■□□□□ 0.84
C1orf43-204ENST00000368518 TRIM71Q2Q1W2 868 aaKnown RBP20.31■□□□□ 0.84
C1orf43-204ENST00000368518 BMP2KLQ5H9B9 411 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms