RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 DDX42Q86XP3 938 aaKnown RBP eCLIP15□□□□□ -0.01
PRKN-205ENST00000366897 SUGP1Q8IWZ8 645 aaKnown RBP15□□□□□ -0.01
PRKN-205ENST00000366897 C7orf25Q9BPX7 421 aa15□□□□□ -0.01
PRKN-205ENST00000366897 BARHL2Q9NY43 387 aa15□□□□□ -0.01
PRKN-205ENST00000366897 TLR2O60603 784 aa15□□□□□ -0.01
PRKN-205ENST00000366897 KIAA0754O94854 1291 aa15□□□□□ -0.01
PRKN-205ENST00000366897 SF3A3Q12874 501 aaKnown RBP eCLIP15□□□□□ -0.01
PRKN-205ENST00000366897 MAN2A1Q16706 1144 aa15□□□□□ -0.01
PRKN-205ENST00000366897 CFAP221Q4G0U5 840 aa15□□□□□ -0.01
PRKN-205ENST00000366897 SLC27A3Q5K4L6 730 aa15□□□□□ -0.01
PRKN-205ENST00000366897 CENPPQ6IPU0 288 aa15□□□□□ -0.01
PRKN-205ENST00000366897 CNNM4Q6P4Q7 775 aa15□□□□□ -0.01
PRKN-205ENST00000366897 TMED8Q6PL24 325 aaPredicted RBP15□□□□□ -0.01
PRKN-205ENST00000366897 USP17L2Q6R6M4 530 aa15□□□□□ -0.01
PRKN-205ENST00000366897 KCNK18Q7Z418 384 aa15□□□□□ -0.01
PRKN-205ENST00000366897 IQCKQ8N0W5 287 aa15□□□□□ -0.01
PRKN-205ENST00000366897 PPANQ9NQ55 473 aaKnown RBP15□□□□□ -0.01
PRKN-205ENST00000366897 SMCO2A6NFE2 343 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 TSPY3P0CV98 308 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 TSPY8P0CW00 308 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 NR1D1P20393 614 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 HNRNPH3P31942 346 aaKnown RBP14.99□□□□□ -0.01
PRKN-205ENST00000366897 SKOR1P84550 965 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 KCNMA1Q12791 1236 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 HLTFQ14527 1009 aaKnown RBP eCLIP14.99□□□□□ -0.01
PRKN-205ENST00000366897 DIXDC1Q155Q3 683 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 CEP85LQ5SZL2 805 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 HGSNATQ68CP4 663 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 PDXDC1Q6P996 788 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 ZNF572Q7Z3I7 529 aaPredicted RBP14.99□□□□□ -0.01
PRKN-205ENST00000366897 TBCKQ8TEA7 893 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 CAVIN3Q969G5 261 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 PDGFDQ9GZP0 370 aaPredicted RBP14.99□□□□□ -0.01
PRKN-205ENST00000366897 BLOC1S4Q9NUP1 217 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 ANKRD36CQ5JPF3 1778 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 KLRF2D3W0D1 207 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 POLR2FP61218 127 aaKnown RBP14.99□□□□□ -0.01
PRKN-205ENST00000366897 CACNB1Q02641 598 aaPredicted RBP14.99□□□□□ -0.01
PRKN-205ENST00000366897 IFT88Q13099 833 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 GRB10Q13322 594 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 SLC15A2Q16348 729 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 IFT20Q8IY31 132 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 TBC1D5Q92609 795 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 FGFBP2Q9BYJ0 223 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 UBA5Q9GZZ9 404 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 RAD51CO43502 376 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 SSBP05455 408 aaKnown RBP eCLIP14.99□□□□□ -0.01
PRKN-205ENST00000366897 MYL1P05976 194 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 PCP11498 1178 aaKnown RBP14.99□□□□□ -0.01
PRKN-205ENST00000366897 PRLRP16471 622 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 ITPK1Q13572 414 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 UBE4AQ14139 1066 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 GRM4Q14833 912 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 SV2BQ7L1I2 683 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 NELFCDQ8IXH7 590 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 NCAPGQ9BPX3 1015 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 TMEM47Q9BQJ4 181 aa14.99□□□□□ -0.01
PRKN-205ENST00000366897 E7EVH7 732 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 EPB41P11171 864 aaKnown RBP14.98□□□□□ -0.01
PRKN-205ENST00000366897 ITIH3Q06033 890 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 NONOQ15233 471 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRKN-205ENST00000366897 ASTE1Q2TB18 679 aaPredicted RBP14.98□□□□□ -0.01
PRKN-205ENST00000366897 ZNF473Q8WTR7 871 aaKnown RBP14.98□□□□□ -0.01
PRKN-205ENST00000366897 CALML4Q96GE6 196 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 JPH2Q9BR39 696 aaPredicted RBP14.98□□□□□ -0.01
PRKN-205ENST00000366897 CD248Q9HCU0 757 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 SH3GLB2Q9NR46 395 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 STK32BQ9NY57 414 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 ARPP21Q9UBL0 812 aaPredicted RBP14.98□□□□□ -0.01
PRKN-205ENST00000366897 ADAMTS1Q9UHI8 967 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 CCNL1Q9UK58 526 aaPredicted RBP14.98□□□□□ -0.01
PRKN-205ENST00000366897 PLAAQ9Y263 795 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 ITGB4P16144 1822 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 ATP2C2O75185 946 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 TDP2O95551 362 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 RAPGEF1Q13905 1077 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 LRRC55Q6ZSA7 311 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 DZIP1Q86YF9 867 aaKnown RBP14.98□□□□□ -0.01
PRKN-205ENST00000366897 SH3RF3Q8TEJ3 882 aaPredicted RBP14.98□□□□□ -0.01
PRKN-205ENST00000366897 LSM14BQ9BX40 385 aaKnown RBP14.98□□□□□ -0.01
PRKN-205ENST00000366897 ATP8A2Q9NTI2 1148 aa14.98□□□□□ -0.01
PRKN-205ENST00000366897 BCCIPQ9P287 314 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRKN-205ENST00000366897 A0A087X0T9 212 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 MEFVO15553 781 aaPredicted RBP14.97□□□□□ -0.01
PRKN-205ENST00000366897 SLC37A4O43826 429 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 LCA5LO95447 670 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 FAM228BP0C875 321 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 PAK2Q13177 524 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 GRIK5Q16478 980 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 NEK8Q86SG6 692 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 CDK5RAP3Q96JB5 506 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 PNMA5Q96PV4 448 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 CCT8L2Q96SF2 557 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 GDF3Q9NR23 364 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 TRAF5O00463 557 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 PPP1R37O75864 691 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 FNTAP49354 379 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 AMPD3Q01432 767 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 PTGISQ16647 500 aa14.97□□□□□ -0.01
PRKN-205ENST00000366897 KIAA0753Q2KHM9 967 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms