RNA–Protein interactions for RNA: ENST00000366463.6

FOXRED2-202, Transcript of FAD dependent oxidoreductase domain containing 2, humanhuman

TSL 2

Gene FOXRED2, Length 2,489 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED2-202ENST00000366463 USP40Q9NVE5 1235 aa13.97□□□□□ -0.17
FOXRED2-202ENST00000366463 EHD2Q9NZN4 543 aa13.97□□□□□ -0.17
FOXRED2-202ENST00000366463 SNX12Q9UMY4 172 aa13.97□□□□□ -0.17
FOXRED2-202ENST00000366463 JRKLQ9Y4A0 524 aa13.97□□□□□ -0.17
FOXRED2-202ENST00000366463 NPHP3-ACAD11A0A0J9YXS1 232 aa13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 NCK2O43639 380 aa13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 TOM1O60784 492 aa13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 BBOX1O75936 387 aa13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 MCM3P25205 808 aa13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 HNRNPH3P31942 346 aaKnown RBP13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 EZH2Q15910 746 aaKnown RBP13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 CERS5Q8N5B7 392 aa13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 CRACR2AQ9BSW2 395 aa13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 FAM204AQ9H8W3 233 aa13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 PSTPIP2Q9H939 334 aa13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 PANK4Q9NVE7 773 aa13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 PCDHA12Q9UN75 941 aa13.96□□□□□ -0.17
FOXRED2-202ENST00000366463 ADAMTSL1Q8N6G6 1762 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 IGKV6D-41A0A0C4DH26 115 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 A0A0U1RQG5 324 aaPredicted RBP13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 USP17L15C9J2P7 530 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 USP17L13C9JLJ4 530 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 USP17L11C9JVI0 530 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 USP17L18D6R9N7 530 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 USP17L22D6RA61 530 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 USP17L17D6RBQ6 530 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 USP17L19D6RCP7 530 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 USP17L20D6RJB6 530 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 E9PMD0 336 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 MAGEA1P43355 309 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 NAP1L1P55209 391 aaKnown RBP13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 USP17L24Q0WX57 530 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 FAM26FQ5R3K3 315 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 USP17L6PQ6QN14 398 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 TMC4Q7Z404 712 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 MSL3Q8N5Y2 521 aaKnown RBP13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 RIN2Q8WYP3 895 aaPredicted RBP13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 BAP1Q92560 729 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 DNAJC19Q96DA6 116 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 IQCDQ96DY2 449 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 ZFP91Q96JP5 570 aaPredicted RBP13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 ZHX3Q9H4I2 956 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 PSD3Q9NYI0 1048 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 PODXL2Q9NZ53 605 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 HPCAL4Q9UM19 191 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 KIAA1024Q9UPX6 916 aa13.96□□□□□ -0.18
FOXRED2-202ENST00000366463 ARFGEF1Q9Y6D6 1849 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 TARSL2A2RTX5 802 aaKnown RBP13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 BUB1O43683 1085 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 RNF40O75150 1001 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 SHMT1P34896 483 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 SLC1A4P43007 532 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 DNA2P51530 1060 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 MRPL12P52815 198 aaKnown RBP13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 APBA1Q02410 837 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 RASSF7Q02833 373 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 DDR1Q08345 913 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 EHHADHQ08426 723 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 ENOX2Q16206 610 aaKnown RBP13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 DOK7Q18PE1 504 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 PPP4R3AQ6IN85 833 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 IQCEQ6IPM2 695 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 PDXDC1Q6P996 788 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 CREG2Q8IUH2 290 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 FNBP4Q8N3X1 1017 aaPredicted RBP13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 ALS2CR12Q96Q35 445 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 LRRC27Q9C0I9 530 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 SALL4Q9UJQ4 1053 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 COL4A3BPQ9Y5P4 624 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 POTEB3A0JP26 581 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 FAM196BA6NMK8 535 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 POTECB2RU33 542 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 PPEF1O14829 653 aaPredicted RBP13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 ARID5AQ03989 594 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 POTEBQ6S5H4 581 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 LEKR1Q6ZMV7 388 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 HDAC7Q8WUI4 952 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 SELENOOQ9BVL4 669 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 MED4Q9NPJ6 270 aa13.95□□□□□ -0.18
FOXRED2-202ENST00000366463 ZBTB5O15062 677 aa13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 STAT3P40763 770 aa13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 CLK2P49760 499 aaKnown RBP13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 KCNMA1Q12791 1236 aa13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 PSMD2Q13200 908 aa13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 SHROOM1Q2M3G4 852 aaPredicted RBP13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 CCDC181Q5TID7 509 aa13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 CCDC70Q6NSX1 233 aa13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 PPP1R18Q6NYC8 613 aa13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 OSBPL9Q96SU4 736 aa13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 LSM14BQ9BX40 385 aaKnown RBP13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 TRIM34Q9BYJ4 488 aa13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 ABCB11O95342 1321 aa13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 UBR3Q6ZT12 1888 aa13.94□□□□□ -0.18
FOXRED2-202ENST00000366463 SYF2O95926 243 aaKnown RBP13.93□□□□□ -0.18
FOXRED2-202ENST00000366463 ACTN2P35609 894 aa13.93□□□□□ -0.18
FOXRED2-202ENST00000366463 POLR2FP61218 127 aaKnown RBP13.93□□□□□ -0.18
FOXRED2-202ENST00000366463 FKBP3Q00688 224 aaKnown RBP13.93□□□□□ -0.18
FOXRED2-202ENST00000366463 SLC7A5Q01650 507 aa13.93□□□□□ -0.18
FOXRED2-202ENST00000366463 NFIAQ12857 509 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms