RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CCDC40Q4G0X9 1142 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 FAM26FQ5R3K3 315 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 LEKR1Q6ZMV7 388 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 KCTD1Q719H9 257 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 PROM2Q8N271 834 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 GOLGA5Q8TBA6 731 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 UIMC1Q96RL1 719 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 PSMB7Q99436 277 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 HPCAL4Q9UM19 191 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 COL4A3BPQ9Y5P4 624 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 LRRC37AA6NMS7 1700 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 A0A0U1RQG5 324 aaPredicted RBP9.51□□□□□ -0.89
RFX3-202ENST00000358730 USP17L10C9JJH3 530 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 TRAF5O00463 557 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 RNF40O75150 1001 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 MYBL2P10244 700 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 MRPL12P52815 198 aaKnown RBP9.51□□□□□ -0.89
RFX3-202ENST00000358730 GFPT1Q06210 699 aaPredicted RBP9.51□□□□□ -0.89
RFX3-202ENST00000358730 PDXDC1Q6P996 788 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 CREG2Q8IUH2 290 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 COG1Q8WTW3 980 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 DNAJC19Q96DA6 116 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 SELENOOQ9BVL4 669 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 FAM204AQ9H8W3 233 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 PANK4Q9NVE7 773 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 TBC1D7Q9P0N9 293 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 SWAP70Q9UH65 585 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 PCDHA12Q9UN75 941 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 KDM3AQ9Y4C1 1321 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 EP400Q96L91 3159 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 ZBTB5O15062 677 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 RAD21O60216 631 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 LCA5LO95447 670 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 GCFC2P16383 781 aaKnown RBP9.51□□□□□ -0.89
RFX3-202ENST00000358730 HOXA7P31268 230 aaPredicted RBP9.51□□□□□ -0.89
RFX3-202ENST00000358730 ACTN2P35609 894 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 MAGEA1P43355 309 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 AARSP49588 968 aaKnown RBP eCLIP9.51□□□□□ -0.89
RFX3-202ENST00000358730 FKBP3Q00688 224 aaKnown RBP9.51□□□□□ -0.89
RFX3-202ENST00000358730 RAD51AP2Q09MP3 1159 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 ZCWPW2Q504Y3 356 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 GPATCH4Q5T3I0 446 aaKnown RBP9.51□□□□□ -0.89
RFX3-202ENST00000358730 NFRKBQ6P4R8 1299 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 TRERF1Q96PN7 1200 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 PSTPIP2Q9H939 334 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 NLRC4Q9NPP4 1024 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 BMP2KQ9NSY1 1161 aaPredicted RBP9.51□□□□□ -0.89
RFX3-202ENST00000358730 QSER1Q2KHR3 1735 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 PPEF1O14829 653 aaPredicted RBP9.5□□□□□ -0.89
RFX3-202ENST00000358730 CXCR5P32302 372 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 SHMT1P34896 483 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 SLC1A4P43007 532 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 SCNN1DP51172 638 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 SEPT2Q15019 361 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 CCDC181Q5TID7 509 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 NELFCDQ8IXH7 590 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 CERS5Q8N5B7 392 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 ANKRD13CQ8N6S4 541 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 OSBPL9Q96SU4 736 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 CRACR2AQ9BSW2 395 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 FGFBP2Q9BYJ0 223 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 NT5C3AQ9H0P0 336 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 USP40Q9NVE5 1235 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 CWC15Q9P013 229 aaKnown RBP9.5□□□□□ -0.89
RFX3-202ENST00000358730 HYOU1Q9Y4L1 999 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 C10orf71Q711Q0 1435 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 MYO3BQ8WXR4 1341 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 POTEB3A0JP26 581 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 POTECB2RU33 542 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 E9PMD0 336 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 TCP1P17987 556 aaKnown RBP9.5□□□□□ -0.89
RFX3-202ENST00000358730 HOXA10P31260 410 aaPredicted RBP9.5□□□□□ -0.89
RFX3-202ENST00000358730 MATR3P43243 847 aaKnown RBP eCLIP9.5□□□□□ -0.89
RFX3-202ENST00000358730 CACNB1Q02641 598 aaPredicted RBP9.5□□□□□ -0.89
RFX3-202ENST00000358730 KCNMA1Q12791 1236 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 POTEBQ6S5H4 581 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 GOLGA6L1Q8N7Z2 621 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 HINFPQ9BQA5 517 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 MXD3Q9BW11 206 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 LSM14BQ9BX40 385 aaKnown RBP9.5□□□□□ -0.89
RFX3-202ENST00000358730 COA1Q9GZY4 146 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 KIAA1024Q9UPX6 916 aa9.5□□□□□ -0.89
RFX3-202ENST00000358730 GREB1LQ9C091 1923 aaPredicted RBP9.5□□□□□ -0.89
RFX3-202ENST00000358730 NCK2O43639 380 aa9.49□□□□□ -0.89
RFX3-202ENST00000358730 SYF2O95926 243 aaKnown RBP9.49□□□□□ -0.89
RFX3-202ENST00000358730 HLA-DOAP06340 250 aa9.49□□□□□ -0.89
RFX3-202ENST00000358730 NAP1L1P55209 391 aaKnown RBP9.49□□□□□ -0.89
RFX3-202ENST00000358730 RASSF7Q02833 373 aa9.49□□□□□ -0.89
RFX3-202ENST00000358730 DDR1Q08345 913 aa9.49□□□□□ -0.89
RFX3-202ENST00000358730 EZH2Q15910 746 aaKnown RBP9.49□□□□□ -0.89
RFX3-202ENST00000358730 FOXR2Q6PJQ5 311 aa9.49□□□□□ -0.89
RFX3-202ENST00000358730 CCNI2Q6ZMN8 369 aaPredicted RBP9.49□□□□□ -0.89
RFX3-202ENST00000358730 GPBP1Q86WP2 473 aa9.49□□□□□ -0.89
RFX3-202ENST00000358730 CCDC65Q8IXS2 484 aa9.49□□□□□ -0.89
RFX3-202ENST00000358730 SPATA4Q8NEY3 305 aa9.49□□□□□ -0.89
RFX3-202ENST00000358730 CRAMP1Q96RY5 1269 aa9.49□□□□□ -0.89
RFX3-202ENST00000358730 SMARCAL1Q9NZC9 954 aa9.49□□□□□ -0.89
RFX3-202ENST00000358730 CEP72Q9P209 647 aa9.49□□□□□ -0.89
RFX3-202ENST00000358730 SALL4Q9UJQ4 1053 aa9.49□□□□□ -0.89
RFX3-202ENST00000358730 ZC3H4Q9UPT8 1303 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms