RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 CCDC192P0DO97 292 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 BCRP11274 1271 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 UBA7P41226 1012 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 SETQ01105 290 aaPredicted RBP20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 XRRA1Q6P2D8 792 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 CABP7Q86V35 215 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 CNNM3Q8NE01 707 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 LRRC15Q8TF66 581 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 ERCC4Q92889 916 aaPredicted RBP20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 JADE2Q9NQC1 790 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 VAV3Q9UKW4 847 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 POTEB2H3BUK9 544 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 FOXN1O15353 648 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 CCND2P30279 289 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 TXLNAP40222 546 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 DNERQ8NFT8 737 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 MMP19Q99542 508 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 NUDT12Q9BQG2 462 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 RAB34Q9BZG1 259 aa20.45■□□□□ 0.86
SMARCD3-202ENST00000356800 PLXNA1Q9UIW2 1896 aa20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 DNAJC25-GNG10A0A024R161 153 aa20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 PSMD10O75832 226 aa20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 PGK2P07205 417 aa20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 SLFN14P0C7P3 912 aa20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 INHBEP58166 350 aa20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 CCNA1P78396 465 aa20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 MDM2Q00987 491 aaPredicted RBP20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 WDR78Q5VTH9 848 aa20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 CYP4F22Q6NT55 531 aa20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 FGD4Q96M96 766 aa20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 DISC1Q9NRI5 854 aa20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 KCNH7Q9NS40 1196 aa20.44■□□□□ 0.86
SMARCD3-202ENST00000356800 RGS20O76081 388 aa20.43■□□□□ 0.86
SMARCD3-202ENST00000356800 ALDH5A1P51649 535 aaPredicted RBP20.43■□□□□ 0.86
SMARCD3-202ENST00000356800 KCTD2Q14681 263 aa20.43■□□□□ 0.86
SMARCD3-202ENST00000356800 FAM110CQ1W6H9 321 aa20.43■□□□□ 0.86
SMARCD3-202ENST00000356800 NAALADL2Q58DX5 795 aa20.43■□□□□ 0.86
SMARCD3-202ENST00000356800 PDXDC2PQ6P474 469 aa20.43■□□□□ 0.86
SMARCD3-202ENST00000356800 IWS1Q96ST2 819 aa20.43■□□□□ 0.86
SMARCD3-202ENST00000356800 RBSNQ9H1K0 784 aa20.43■□□□□ 0.86
SMARCD3-202ENST00000356800 FCER1AP12319 257 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 TYRO3Q06418 890 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 TAF1CQ15572 869 aaPredicted RBP20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 GRAMD1CQ8IYS0 662 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 IQUBQ8NA54 791 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 INPP4AQ96PE3 977 aaPredicted RBP20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 PNMA5Q96PV4 448 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 PLIN2Q99541 437 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 PYM1Q9BRP8 204 aaKnown RBP20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 ZNF577Q9BSK1 485 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 AGO4Q9HCK5 861 aaKnown RBP20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 USP25Q9UHP3 1055 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 CPA4Q9UI42 421 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 MCM3APO60318 1980 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 IPO5O00410 1097 aaKnown RBP20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 PLCG1P19174 1290 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 TM4SF4P48230 202 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 SREBF2Q12772 1141 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 GRM1Q13255 1194 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 SEMA3FQ13275 785 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 GRB10Q13322 594 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 PNOCQ13519 176 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 MTMR1Q13613 665 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 ZRSR1Q15695 479 aaKnown RBP20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 LRCH2Q5VUJ6 765 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 SASS6Q6UVJ0 657 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 OTOP1Q7RTM1 612 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 SH3RF1Q7Z6J0 888 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 KIAA1468Q9P260 1216 aa20.42■□□□□ 0.86
SMARCD3-202ENST00000356800 DOCK5Q9H7D0 1870 aa20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 EML1O00423 815 aa20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 DHX15O43143 795 aaKnown RBP20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 PRR29P0C7W0 189 aa20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 EDNRBP24530 442 aa20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 STAT6P42226 847 aa20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 ITGB3BPQ13352 177 aaPredicted RBP20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 ECM1Q16610 540 aa20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 RRAGBQ5VZM2 374 aa20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 B3GNT9Q6UX72 402 aa20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 PAXIP1Q6ZW49 1069 aaPredicted RBP20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 SNX29Q8TEQ0 813 aa20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 MTRQ99707 1265 aa20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 CCDC39Q9UFE4 941 aa20.41■□□□□ 0.86
SMARCD3-202ENST00000356800 GAS7O60861 476 aa20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 XRCC6P12956 609 aaKnown RBP eCLIP20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 PPP2R5CQ13362 524 aa20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 KRT79Q5XKE5 535 aa20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 NCAPH2Q6IBW4 605 aa20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 KANK3Q6NY19 840 aa20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 CEP57L1Q8IYX8 460 aa20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 RASSF8Q8NHQ8 419 aa20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 GPRASP2Q96D09 838 aa20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 PAGE5Q96GU1 130 aa20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 RIT2Q99578 217 aa20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 CREBZFQ9NS37 354 aa20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 PKD2L1Q9P0L9 805 aa20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 ADD3Q9UEY8 706 aaKnown RBP20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 HOOK1Q9UJC3 728 aaKnown RBP20.4■□□□□ 0.86
SMARCD3-202ENST00000356800 DOCK3Q8IZD9 2030 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms