RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 RBM5P52756 815 aaKnown RBP eCLIP15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 SNAP25P60880 206 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 WDR93Q6P2C0 686 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 TRIM58Q8NG06 486 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 FAM204AQ9H8W3 233 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 POLD4Q9HCU8 107 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 PNMA6FA0A0J9YX94 578 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 ESYT2A0FGR8 921 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 MRPL12P52815 198 aaKnown RBP15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 HERC4Q5GLZ8 1057 aaPredicted RBP15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 FAM26FQ5R3K3 315 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 CUL5Q93034 780 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 FGFBP2Q9BYJ0 223 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 TSGA10Q9BZW7 698 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 NRAPQ86VF7 1730 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 HLA-DOAP06340 250 aa15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 ZNF543Q08ER8 600 aa15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 COASYQ13057 564 aa15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 HDAC7Q8WUI4 952 aa15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 QTRT2Q9H974 415 aaKnown RBP15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 COL5A3P25940 1745 aaPredicted RBP15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 PPEF1O14829 653 aaPredicted RBP15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 RNF40O75150 1001 aa15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 STAT3P40763 770 aa15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 RNASE9P60153 205 aaKnown RBP15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 IKQ13123 557 aaPredicted RBP15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 SEMA3FQ13275 785 aa15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 A0A1W2PQJ5 194 aa15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 EPS15P42566 896 aa15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 POLR2FP61218 127 aaKnown RBP15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 ALS2CR12Q96Q35 445 aa15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 SNX12Q9UMY4 172 aa15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 JRKLQ9Y4A0 524 aa15.55■□□□□ 0.08
ATP2C1-201ENST00000328560 POTEB3A0JP26 581 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 POTECB2RU33 542 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 SLC1A4P43007 532 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 SHROOM1Q2M3G4 852 aaPredicted RBP15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 POTEBQ6S5H4 581 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 FAM71BQ8TC56 605 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 HAS1Q92839 578 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 LRRC1Q9BTT6 524 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 LSM14BQ9BX40 385 aaKnown RBP15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 SH2D4AQ9H788 454 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 MCM3P25205 808 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 HMGB2P26583 209 aaKnown RBP15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 SMARCA1P28370 1054 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 LRRC63Q05C16 580 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 FIGNQ5HY92 759 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 IQCEQ6IPM2 695 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 C15orf52Q6ZUT6 534 aaKnown RBP15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 GPBP1Q86WP2 473 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 ZNF622Q969S3 477 aaKnown RBP eCLIP15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 RIC8AQ9NPQ8 531 aa15.54■□□□□ 0.08
ATP2C1-201ENST00000328560 ANO9A1A5B4 782 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 RAPGEF1Q13905 1077 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 PDIA5Q14554 519 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 LRRC55Q6ZSA7 311 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 SND1Q7KZF4 910 aaKnown RBP eCLIP15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 SELENOOQ9BVL4 669 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 SALL4Q9UJQ4 1053 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 LTBP4Q8N2S1 1624 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 MEIS1O00470 390 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 GAKO14976 1311 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 ACTN2P35609 894 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 FKBP3Q00688 224 aaKnown RBP15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 NFIAQ12857 509 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 SLC27A3Q5K4L6 730 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 CERS5Q8N5B7 392 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 FAM163AQ96GL9 167 aaPredicted RBP15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 RPGRIP1Q96KN7 1286 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 TNRC6CQ9HCJ0 1690 aaKnown RBP15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 DMGDHQ9UI17 866 aaKnown RBP15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 COL4A3BPQ9Y5P4 624 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 PTPROQ16827 1216 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 CERKQ8TCT0 537 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 CRAMP1Q96RY5 1269 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 OSBPL9Q96SU4 736 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 LRRC27Q9C0I9 530 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 COA1Q9GZY4 146 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 PCDHA1Q9Y5I3 950 aa15.53■□□□□ 0.08
ATP2C1-201ENST00000328560 FAM170AA1A519 330 aa15.52■□□□□ 0.08
ATP2C1-201ENST00000328560 GGCXP38435 758 aa15.52■□□□□ 0.08
ATP2C1-201ENST00000328560 CREG2Q8IUH2 290 aa15.52■□□□□ 0.08
ATP2C1-201ENST00000328560 MS4A14Q96JA4 679 aa15.52■□□□□ 0.08
ATP2C1-201ENST00000328560 HPCAL4Q9UM19 191 aa15.52■□□□□ 0.08
ATP2C1-201ENST00000328560 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.52■□□□□ 0.08
ATP2C1-201ENST00000328560 PLA2G4BP0C869 781 aa15.52■□□□□ 0.08
ATP2C1-201ENST00000328560 PAFAH1B1P43034 410 aa15.52■□□□□ 0.08
ATP2C1-201ENST00000328560 CRY2Q49AN0 593 aa15.52■□□□□ 0.08
ATP2C1-201ENST00000328560 CCNI2Q6ZMN8 369 aaPredicted RBP15.52■□□□□ 0.08
ATP2C1-201ENST00000328560 ZFPM1Q8IX07 1006 aa15.52■□□□□ 0.08
ATP2C1-201ENST00000328560 ZNF219Q9P2Y4 722 aaPredicted RBP15.52■□□□□ 0.08
ATP2C1-201ENST00000328560 ZBTB5O15062 677 aa15.52■□□□□ 0.07
ATP2C1-201ENST00000328560 TAL1P17542 331 aaPredicted RBP15.52■□□□□ 0.07
ATP2C1-201ENST00000328560 KCNMA1Q12791 1236 aa15.52■□□□□ 0.07
ATP2C1-201ENST00000328560 USH1GQ495M9 461 aa15.52■□□□□ 0.07
ATP2C1-201ENST00000328560 PDXDC1Q6P996 788 aa15.52■□□□□ 0.07
ATP2C1-201ENST00000328560 FOXR1Q6PIV2 292 aa15.52■□□□□ 0.07
ATP2C1-201ENST00000328560 CCDC65Q8IXS2 484 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms