RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 WDR19Q8NEZ3 1342 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 PCDH11XQ9BZA7 1347 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 PCDH11YQ9BZA8 1340 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 BICDL2A1A5D9 508 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 KRIT1O00522 736 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 ZKSCAN8Q15776 578 aaPredicted RBP15.62■□□□□ 0.09
PABPC1-201ENST00000318607 SLC9C1Q4G0N8 1177 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 TBCKQ8TEA7 893 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 TGFBRAP1Q8WUH2 860 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 TRIM51Q9BSJ1 452 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 FBXL5Q9UKA1 691 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 LAMA4Q16363 1823 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 A0A087X0T9 212 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 FAM228BP0C875 321 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 RPS6KA1Q15418 735 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 RPAINQ86UA6 219 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 FAM114A1Q8IWE2 563 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 RDH13Q8NBN7 331 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 NUDT12Q9BQG2 462 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 PDS5AQ29RF7 1337 aaKnown RBP15.62■□□□□ 0.09
PABPC1-201ENST00000318607 CNTNAP5Q8WYK1 1306 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 TARSL2A2RTX5 802 aaKnown RBP15.62■□□□□ 0.09
PABPC1-201ENST00000318607 CTNND1O60716 968 aaKnown RBP15.62■□□□□ 0.09
PABPC1-201ENST00000318607 LONP1P36776 959 aaKnown RBP15.62■□□□□ 0.09
PABPC1-201ENST00000318607 PTGISQ16647 500 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 HERC4Q5GLZ8 1057 aaPredicted RBP15.62■□□□□ 0.09
PABPC1-201ENST00000318607 SFMBT2Q5VUG0 894 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 PRPF38AQ8NAV1 312 aaKnown RBP15.62■□□□□ 0.09
PABPC1-201ENST00000318607 PAIP2Q9BPZ3 127 aaKnown RBP15.62■□□□□ 0.09
PABPC1-201ENST00000318607 LRRC4CQ9HCJ2 640 aa15.62■□□□□ 0.09
PABPC1-201ENST00000318607 ABCC12Q96J65 1359 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 COL24A1Q17RW2 1714 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 FOXO6A8MYZ6 492 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 MEIS1O00470 390 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 MDH1P40925 334 aaKnown RBP15.61■□□□□ 0.09
PABPC1-201ENST00000318607 MYO1EQ12965 1108 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 KLHDC7AQ5VTJ3 777 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 RETREG2Q8NC44 543 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 CYFIP2Q96F07 1278 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 TSGA10Q9BZW7 698 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.61■□□□□ 0.096e-20■□□□□ 10.8
PABPC1-201ENST00000318607 KLRF2D3W0D1 207 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 ERFP50548 548 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 EMBQ6PCB8 327 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 SLC30A10Q6XR72 485 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 KIF2BQ8N4N8 673 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 VGLL2Q8N8G2 317 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 KIAA0895Q8NCT3 520 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 KCNV2Q8TDN2 545 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 ZKSCAN4Q969J2 545 aaPredicted RBP15.61■□□□□ 0.09
PABPC1-201ENST00000318607 NUP58Q9BVL2 599 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 EPN3Q9H201 632 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 THAP9Q9H5L6 903 aa15.61■□□□□ 0.09
PABPC1-201ENST00000318607 RBM28Q9NW13 759 aaKnown RBP15.61■□□□□ 0.09
PABPC1-201ENST00000318607 LTN1O94822 1766 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 TDP2O95551 362 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 PICALMQ13492 652 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 UBE2SQ16763 222 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 CCDC152Q4G0S7 254 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 GJB7Q6PEY0 223 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 FNBP4Q8N3X1 1017 aaPredicted RBP15.6■□□□□ 0.09
PABPC1-201ENST00000318607 FAM167BQ9BTA0 163 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 RREB1Q92766 1687 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 MYMKA6NI61 221 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 CALML3P27482 149 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 MECOMQ03112 1051 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 CCDC170Q8IYT3 715 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 ANKRD42Q8N9B4 389 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 GIMAP8Q8ND71 665 aaPredicted RBP15.6■□□□□ 0.09
PABPC1-201ENST00000318607 ATP6V1G3Q96LB4 118 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 ELAC2Q9BQ52 826 aaKnown RBP15.6■□□□□ 0.09
PABPC1-201ENST00000318607 SFI1A8K8P3 1242 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 TTI1O43156 1089 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 KIF4AO95239 1232 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 OR52Z1P0C646 297 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 SLURP2P0DP57 97 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 EZRP15311 586 aaKnown RBP15.6■□□□□ 0.09
PABPC1-201ENST00000318607 VPS41P49754 854 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 PLTPP55058 493 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 FUT2Q10981 343 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 MIIPQ5JXC2 388 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 CRNKL1Q9BZJ0 848 aaKnown RBP15.6■□□□□ 0.09
PABPC1-201ENST00000318607 SEC63Q9UGP8 760 aaKnown RBP15.6■□□□□ 0.09
PABPC1-201ENST00000318607 PNMA2Q9UL42 364 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 PCDHA4Q9UN74 947 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 PTPN22Q9Y2R2 807 aa15.6■□□□□ 0.09
PABPC1-201ENST00000318607 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.6■□□□□ 0.09
PABPC1-201ENST00000318607 KLRC4O43908 158 aa15.59■□□□□ 0.09
PABPC1-201ENST00000318607 SNCBQ16143 134 aa15.59■□□□□ 0.09
PABPC1-201ENST00000318607 PFKFB3Q16875 520 aaPredicted RBP15.59■□□□□ 0.09
PABPC1-201ENST00000318607 FAM83BQ5T0W9 1011 aa15.59■□□□□ 0.09
PABPC1-201ENST00000318607 CADPS2Q86UW7 1296 aa15.59■□□□□ 0.09
PABPC1-201ENST00000318607 CACNA2D3Q8IZS8 1091 aa15.59■□□□□ 0.09
PABPC1-201ENST00000318607 PIGSQ96S52 555 aa15.59■□□□□ 0.09
PABPC1-201ENST00000318607 PCNTO95613 3336 aa15.59■□□□□ 0.09
PABPC1-201ENST00000318607 ALX1Q15699 326 aa15.59■□□□□ 0.09
PABPC1-201ENST00000318607 TRIM68Q6AZZ1 485 aa15.59■□□□□ 0.09
PABPC1-201ENST00000318607 LRRC47Q8N1G4 583 aaKnown RBP15.59■□□□□ 0.09
PABPC1-201ENST00000318607 MICAL1Q8TDZ2 1067 aa15.59■□□□□ 0.09
PABPC1-201ENST00000318607 VEZTQ9HBM0 779 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms