RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 CHST3Q7LGC8 479 aa9.46□□□□□ -0.9
TPM3-203ENST00000312970 DEFB128Q7Z7B8 93 aa9.46□□□□□ -0.9
TPM3-203ENST00000312970 VWCEQ96DN2 955 aa9.46□□□□□ -0.9
TPM3-203ENST00000312970 UHRF1Q96T88 793 aaPredicted RBP9.46□□□□□ -0.9
TPM3-203ENST00000312970 NKX2-4Q9H2Z4 354 aa9.46□□□□□ -0.9
TPM3-203ENST00000312970 PXMP2Q9NR77 195 aa9.46□□□□□ -0.9
TPM3-203ENST00000312970 DDX41Q9UJV9 622 aaKnown RBP9.46□□□□□ -0.9
TPM3-203ENST00000312970 NOD1Q9Y239 953 aa9.46□□□□□ -0.9
TPM3-203ENST00000312970 LAMA4Q16363 1823 aa9.46□□□□□ -0.9
TPM3-203ENST00000312970 SCN10AQ9Y5Y9 1956 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 E7EWF7 191 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 OPLAHO14841 1288 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 PPP1R11O60927 126 aaPredicted RBP9.45□□□□□ -0.9
TPM3-203ENST00000312970 IQCF3P0C7M6 154 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 ATP2A2P16615 1042 aaKnown RBP9.45□□□□□ -0.9
TPM3-203ENST00000312970 MLLT3P42568 568 aaPredicted RBP9.45□□□□□ -0.9
TPM3-203ENST00000312970 RABGGTBP53611 331 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 MRPS5P82675 430 aaKnown RBP9.45□□□□□ -0.9
TPM3-203ENST00000312970 GHRHRQ02643 423 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 ADGRE1Q14246 886 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 GRM4Q14833 912 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 WTAPQ15007 396 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 SART3Q15020 963 aaKnown RBP9.45□□□□□ -0.9
TPM3-203ENST00000312970 RALYLQ86SE5 291 aaKnown RBP9.45□□□□□ -0.9
TPM3-203ENST00000312970 VSIG10LQ86VR7 867 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 SESTD1Q86VW0 696 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 DHX37Q8IY37 1157 aaKnown RBP9.45□□□□□ -0.9
TPM3-203ENST00000312970 CCDC155Q8N6L0 562 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 NCOA7Q8NI08 942 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 PPP1R13LQ8WUF5 828 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 EMID1Q96A84 441 aaPredicted RBP9.45□□□□□ -0.9
TPM3-203ENST00000312970 NECAB3Q96P71 396 aaPredicted RBP9.45□□□□□ -0.9
TPM3-203ENST00000312970 FTOQ9C0B1 505 aaKnown RBP eCLIP9.45□□□□□ -0.97e-6■■□□□ 12.9
TPM3-203ENST00000312970 RIOX1Q9H6W3 641 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 YBX2Q9Y2T7 364 aaKnown RBP9.45□□□□□ -0.9
TPM3-203ENST00000312970 PCDHA11Q9Y5I1 949 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 MRVI1Q9Y6F6 885 aa9.45□□□□□ -0.9
TPM3-203ENST00000312970 MYH6P13533 1939 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 PNMA6FA0A0J9YX94 578 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 GCOM1H8Y6P7 765 aaPredicted RBP9.44□□□□□ -0.9
TPM3-203ENST00000312970 SGSM2O43147 1006 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 PPFIA4O75335 1185 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 POLR2MP0CAP2 368 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 TGFB3P10600 412 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 MYCLP12524 364 aaPredicted RBP9.44□□□□□ -0.9
TPM3-203ENST00000312970 IGFBP4P22692 258 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 TMEM67Q5HYA8 995 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 GDF6Q6KF10 455 aaPredicted RBP9.44□□□□□ -0.9
TPM3-203ENST00000312970 HOMER1Q86YM7 354 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 C7orf31Q8N865 590 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 PPTC7Q8NI37 304 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 CAGE1Q8TC20 777 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 PHOSPHO2Q8TCD6 241 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 KAT2BQ92831 832 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 MAP4K1Q92918 833 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 PIGSQ96S52 555 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 PDCD2LQ9BRP1 358 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 KATNAL1Q9BW62 490 aa9.44□□□□□ -0.9
TPM3-203ENST00000312970 KIAA1217Q5T5P2 1943 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 KIF28PB7ZC32 967 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 RGS20O76081 388 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 PARNO95453 639 aaKnown RBP9.43□□□□□ -0.9
TPM3-203ENST00000312970 BMP1P13497 986 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 MYOGP15173 224 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 HOXA13P31271 388 aaPredicted RBP9.43□□□□□ -0.9
TPM3-203ENST00000312970 PSEN2P49810 448 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 IRX6P78412 446 aaPredicted RBP9.43□□□□□ -0.9
TPM3-203ENST00000312970 TROAPQ12815 778 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 PGM5Q15124 567 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 CELF3Q5SZQ8 465 aaKnown RBP9.43□□□□□ -0.9
TPM3-203ENST00000312970 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 PPP2R2DQ66LE6 453 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 CATIPQ7Z7H3 387 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 FCHSD1Q86WN1 690 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 IGDCC4Q8TDY8 1250 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 AFAP1L1Q8TED9 768 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 DDX27Q96GQ7 796 aaKnown RBP9.43□□□□□ -0.9
TPM3-203ENST00000312970 SLC9A7Q96T83 725 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 ALG1Q9BT22 464 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 SENP2Q9HC62 589 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 THEGQ9P2T0 379 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 HDAC6Q9UBN7 1215 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 GTF2IRD1Q9UHL9 959 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 SCN5AQ14524 2016 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 MYH7BA7E2Y1 1941 aa9.43□□□□□ -0.9
TPM3-203ENST00000312970 TANC1Q9C0D5 1861 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 HAS3O00219 553 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 CYTH3O43739 400 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 BAIAP3O94812 1187 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 PRR29P0C7W0 189 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 SELPP16109 830 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 CCND2P30279 289 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 SP2Q02086 613 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 PTK7Q13308 1070 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 MFSD10Q14728 455 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 KIAA0753Q2KHM9 967 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 SLC35G1Q2M3R5 365 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 TMTC2Q8N394 836 aa9.42□□□□□ -0.9
TPM3-203ENST00000312970 SPDYE1Q8NFV5 336 aaPredicted RBP9.42□□□□□ -0.9
TPM3-203ENST00000312970 SPATA33Q96N06 139 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms