RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 CXCR5P32302 372 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 MAGEA1P43355 309 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 MRPS25P82663 173 aaKnown RBP18.44■□□□□ 0.54
RPN1-201ENST00000296255 COASYQ13057 564 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 SLF2Q8IX21 1173 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 SPATA4Q8NEY3 305 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 TBC1D16Q8TBP0 767 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 PSMB7Q99436 277 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 CWC15Q9P013 229 aaKnown RBP18.44■□□□□ 0.54
RPN1-201ENST00000296255 DMGDHQ9UI17 866 aaKnown RBP18.44■□□□□ 0.54
RPN1-201ENST00000296255 MYH7BA7E2Y1 1941 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 PNMA6FA0A0J9YX94 578 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 NOL4O94818 638 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 ITIH3Q06033 890 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 ZNF543Q08ER8 600 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 MYOCDQ8IZQ8 938 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 MTMR8Q96EF0 704 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 NGLY1Q96IV0 654 aa18.44■□□□□ 0.54
RPN1-201ENST00000296255 DDX25Q9UHL0 483 aaKnown RBP18.44■□□□□ 0.54
RPN1-201ENST00000296255 SLC1A4P43007 532 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 FOXR2Q6PJQ5 311 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 LRRC31Q6UY01 552 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 TSG101Q99816 390 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 TANGO6Q9C0B7 1094 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 DDX4Q9NQI0 724 aaKnown RBP18.43■□□□□ 0.54
RPN1-201ENST00000296255 TLR2O60603 784 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 RASSF7Q02833 373 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
RPN1-201ENST00000296255 PROM2Q8N271 834 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 AFAP1L1Q8TED9 768 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 TBC1D22AQ8WUA7 517 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 EDEM3Q9BZQ6 932 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 LRRC27Q9C0I9 530 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 FAM184BQ9ULE4 1060 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 HYOU1Q9Y4L1 999 aa18.43■□□□□ 0.54
RPN1-201ENST00000296255 SLC16A2P36021 539 aa18.42■□□□□ 0.54
RPN1-201ENST00000296255 PPP1R18Q6NYC8 613 aa18.42■□□□□ 0.54
RPN1-201ENST00000296255 CACNA2D4Q7Z3S7 1137 aa18.42■□□□□ 0.54
RPN1-201ENST00000296255 ALS2CR12Q96Q35 445 aa18.42■□□□□ 0.54
RPN1-201ENST00000296255 UIMC1Q96RL1 719 aa18.42■□□□□ 0.54
RPN1-201ENST00000296255 CRACR2AQ9BSW2 395 aa18.42■□□□□ 0.54
RPN1-201ENST00000296255 TLR10Q9BXR5 811 aa18.42■□□□□ 0.54
RPN1-201ENST00000296255 NLRC4Q9NPP4 1024 aa18.42■□□□□ 0.54
RPN1-201ENST00000296255 PANK4Q9NVE7 773 aa18.42■□□□□ 0.54
RPN1-201ENST00000296255 FEZ2Q9UHY8 353 aaPredicted RBP18.42■□□□□ 0.54
RPN1-201ENST00000296255 COL4A3BPQ9Y5P4 624 aa18.42■□□□□ 0.54
RPN1-201ENST00000296255 TCP1P17987 556 aaKnown RBP18.41■□□□□ 0.54
RPN1-201ENST00000296255 MATR3P43243 847 aaKnown RBP eCLIP18.41■□□□□ 0.54
RPN1-201ENST00000296255 SLC7A5Q01650 507 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 APBA1Q02410 837 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 PODXL2Q9NZ53 605 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 TBC1D7Q9P0N9 293 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 ARFGEF1Q9Y6D6 1849 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 SSU72P8A0A1W2PR75 194 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 TRAF5O00463 557 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 TTLL1O95922 423 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 IVLP07476 585 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 GTF2IP78347 998 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 FKBP3Q00688 224 aaKnown RBP18.41■□□□□ 0.54
RPN1-201ENST00000296255 FAM26FQ5R3K3 315 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 KLHDC7AQ5VTJ3 777 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 TMC4Q7Z404 712 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 RBM17Q96I25 401 aaKnown RBP18.41■□□□□ 0.54
RPN1-201ENST00000296255 TMEM51Q9NW97 253 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 PCDHA2Q9Y5H9 948 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
RPN1-201ENST00000296255 USP17L10C9JJH3 530 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 RBAK-RBAKDNI3L0D1 243 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 BUB1O43683 1085 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 HOXA7P31268 230 aaPredicted RBP18.4■□□□□ 0.54
RPN1-201ENST00000296255 CCDC70Q6NSX1 233 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 CUL5Q93034 780 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 KANSL2Q9H9L4 492 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 CEP72Q9P209 647 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 NPHP3-ACAD11A0A0J9YXS1 232 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 E9PMD0 336 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 C6orf229H3BNL8 230 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 SSBP05455 408 aaKnown RBP eCLIP18.4■□□□□ 0.54
RPN1-201ENST00000296255 SEPT2Q15019 361 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 CCDC40Q4G0X9 1142 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 HYIQ5T013 277 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 FAM83BQ5T0W9 1011 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 HAUS3Q68CZ6 603 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 SND1Q7KZF4 910 aaKnown RBP eCLIP18.4■□□□□ 0.549e-8■■■■□ 20.5
RPN1-201ENST00000296255 SRLQ86TD4 932 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 ZFP91Q96JP5 570 aaPredicted RBP18.4■□□□□ 0.54
RPN1-201ENST00000296255 LRRC4BQ9NT99 713 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 PCDHA12Q9UN75 941 aa18.4■□□□□ 0.54
RPN1-201ENST00000296255 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.39■□□□□ 0.53
RPN1-201ENST00000296255 A0A0U1RQG5 324 aaPredicted RBP18.39■□□□□ 0.53
RPN1-201ENST00000296255 F8W031 263 aaPredicted RBP18.39■□□□□ 0.53
RPN1-201ENST00000296255 SLURP2P0DP57 97 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 SHMT1P34896 483 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 KCTD1Q719H9 257 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 NELFCDQ8IXH7 590 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 LSM14BQ9BX40 385 aaKnown RBP18.39■□□□□ 0.53
RPN1-201ENST00000296255 ATF5Q9Y2D1 282 aaPredicted RBP18.39■□□□□ 0.53
RPN1-201ENST00000296255 RRP15Q9Y3B9 282 aaKnown RBP18.39■□□□□ 0.53
RPN1-201ENST00000296255 GOLGA6BA6NDN3 693 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 MYO1CO00159 1063 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms