RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 CENPFP49454 3210 aa18.75■□□□□ 0.59
SNRPF-201ENST00000266735 FAM86B1E9PN63 330 aa18.74■□□□□ 0.59
SNRPF-201ENST00000266735 MEIS1O00470 390 aa18.74■□□□□ 0.59
SNRPF-201ENST00000266735 FAM86B2P0C5J1 330 aa18.74■□□□□ 0.59
SNRPF-201ENST00000266735 U2AF2P26368 475 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNRPF-201ENST00000266735 NOSTRINQ8IVI9 506 aa18.74■□□□□ 0.59
SNRPF-201ENST00000266735 LENG1Q96BZ8 264 aaPredicted RBP18.74■□□□□ 0.59
SNRPF-201ENST00000266735 SPC25Q9HBM1 224 aa18.74■□□□□ 0.59
SNRPF-201ENST00000266735 OGDHLQ9ULD0 1010 aa18.74■□□□□ 0.59
SNRPF-201ENST00000266735 CCDC85CA6NKD9 419 aa18.73■□□□□ 0.59
SNRPF-201ENST00000266735 PDIA4P13667 645 aaKnown RBP18.73■□□□□ 0.59
SNRPF-201ENST00000266735 SYT1P21579 422 aa18.73■□□□□ 0.59
SNRPF-201ENST00000266735 LY6KQ17RY6 165 aa18.73■□□□□ 0.59
SNRPF-201ENST00000266735 LETM2Q2VYF4 491 aa18.73■□□□□ 0.59
SNRPF-201ENST00000266735 MCTP1Q6DN14 999 aa18.73■□□□□ 0.59
SNRPF-201ENST00000266735 TLK2Q86UE8 772 aa18.73■□□□□ 0.59
SNRPF-201ENST00000266735 CYP2W1Q8TAV3 490 aa18.73■□□□□ 0.59
SNRPF-201ENST00000266735 SENP7Q9BQF6 1050 aa18.73■□□□□ 0.59
SNRPF-201ENST00000266735 KCNH7Q9NS40 1196 aa18.73■□□□□ 0.59
SNRPF-201ENST00000266735 LRRC37A2A6NM11 1700 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 IGLV3-22A0A075B6J6 115 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 CYP3A7-CYP3A51PA0A087WV96 503 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 VPS37CA5D8V6 355 aaPredicted RBP18.72■□□□□ 0.59
SNRPF-201ENST00000266735 KIF28PB7ZC32 967 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 EDIL3O43854 480 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 GH1P01241 217 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 TFRCP02786 760 aaKnown RBP18.72■□□□□ 0.59
SNRPF-201ENST00000266735 GCFC2P16383 781 aaKnown RBP18.72■□□□□ 0.59
SNRPF-201ENST00000266735 UBA1P22314 1058 aaKnown RBP18.72■□□□□ 0.59
SNRPF-201ENST00000266735 CYP3A7P24462 503 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 ANP32AP39687 249 aaKnown RBP18.72■□□□□ 0.59
SNRPF-201ENST00000266735 GJA9P57773 515 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 NKX3-2P78367 333 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 SEMA3FQ13275 785 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 NEDD9Q14511 834 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 TMEM63BQ5T3F8 832 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 PPP4R3AQ6IN85 833 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 PLA2G4DQ86XP0 818 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 SPRYD3Q8NCJ5 442 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 ARRDC4Q8NCT1 418 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 GIMAP8Q8ND71 665 aaPredicted RBP18.72■□□□□ 0.59
SNRPF-201ENST00000266735 AP5M1Q9H0R1 490 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 UPF3AQ9H1J1 476 aaKnown RBP18.72■□□□□ 0.59
SNRPF-201ENST00000266735 SYNRGQ9UMZ2 1314 aa18.72■□□□□ 0.59
SNRPF-201ENST00000266735 POTEFA5A3E0 1075 aa18.71■□□□□ 0.59
SNRPF-201ENST00000266735 FAM205CA6NFA0 338 aa18.71■□□□□ 0.59
SNRPF-201ENST00000266735 DYNC1LI2O43237 492 aaPredicted RBP18.71■□□□□ 0.59
SNRPF-201ENST00000266735 ADAMTS4O75173 837 aa18.71■□□□□ 0.59
SNRPF-201ENST00000266735 PGK1P00558 417 aa18.71■□□□□ 0.59
SNRPF-201ENST00000266735 SP2Q02086 613 aa18.71■□□□□ 0.59
SNRPF-201ENST00000266735 LAMC2Q13753 1193 aa18.71■□□□□ 0.59
SNRPF-201ENST00000266735 Q4G0T1 1027 aa18.71■□□□□ 0.59
SNRPF-201ENST00000266735 PRR16Q569H4 304 aa18.71■□□□□ 0.59
SNRPF-201ENST00000266735 GJC2Q5T442 439 aaPredicted RBP18.71■□□□□ 0.59
SNRPF-201ENST00000266735 RNF180Q86T96 592 aa18.71■□□□□ 0.59
SNRPF-201ENST00000266735 OR6J1Q8NGC5 347 aa18.71■□□□□ 0.59
SNRPF-201ENST00000266735 COPS5Q92905 334 aa18.71■□□□□ 0.59
SNRPF-201ENST00000266735 EMID1Q96A84 441 aaPredicted RBP18.71■□□□□ 0.59
SNRPF-201ENST00000266735 MBOAT7Q96N66 472 aa18.71■□□□□ 0.59
SNRPF-201ENST00000266735 NOL7Q9UMY1 257 aaKnown RBP18.71■□□□□ 0.59
SNRPF-201ENST00000266735 STX6O43752 255 aa18.7■□□□□ 0.58
SNRPF-201ENST00000266735 CCNT1O60563 726 aaKnown RBP18.7■□□□□ 0.58
SNRPF-201ENST00000266735 TDP2O95551 362 aa18.7■□□□□ 0.58
SNRPF-201ENST00000266735 GGPS1O95749 300 aa18.7■□□□□ 0.58
SNRPF-201ENST00000266735 ARP10275 920 aa18.7■□□□□ 0.58
SNRPF-201ENST00000266735 KCNA2P16389 499 aa18.7■□□□□ 0.58
SNRPF-201ENST00000266735 TRAPPC10P48553 1259 aa18.7■□□□□ 0.58
SNRPF-201ENST00000266735 CELF3Q5SZQ8 465 aaKnown RBP18.7■□□□□ 0.58
SNRPF-201ENST00000266735 DHX37Q8IY37 1157 aaKnown RBP18.7■□□□□ 0.58
SNRPF-201ENST00000266735 ANKLE1Q8NAG6 615 aa18.7■□□□□ 0.58
SNRPF-201ENST00000266735 LENG9Q96B70 501 aa18.7■□□□□ 0.58
SNRPF-201ENST00000266735 AGO4Q9HCK5 861 aaKnown RBP18.7■□□□□ 0.58
SNRPF-201ENST00000266735 DDX25Q9UHL0 483 aaKnown RBP18.7■□□□□ 0.58
SNRPF-201ENST00000266735 DNM1LO00429 736 aa18.69■□□□□ 0.58
SNRPF-201ENST00000266735 ATP9AO75110 1047 aa18.69■□□□□ 0.58
SNRPF-201ENST00000266735 C6orf222P0C671 652 aaPredicted RBP18.69■□□□□ 0.58
SNRPF-201ENST00000266735 CST5P28325 142 aaPredicted RBP18.69■□□□□ 0.58
SNRPF-201ENST00000266735 CPT1AP50416 773 aa18.69■□□□□ 0.58
SNRPF-201ENST00000266735 ARHGAP1Q07960 439 aa18.69■□□□□ 0.58
SNRPF-201ENST00000266735 BRDTQ58F21 947 aaPredicted RBP18.69■□□□□ 0.58
SNRPF-201ENST00000266735 METTL7BQ6UX53 244 aa18.69■□□□□ 0.58
SNRPF-201ENST00000266735 KLHDC9Q8NEP7 349 aa18.69■□□□□ 0.58
SNRPF-201ENST00000266735 ZNF577Q9BSK1 485 aa18.69■□□□□ 0.58
SNRPF-201ENST00000266735 MLXIPQ9HAP2 919 aa18.69■□□□□ 0.58
SNRPF-201ENST00000266735 KCNA4P22459 653 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 PTGS1P23219 599 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 LRRC41Q15345 812 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 FSCN1Q16658 493 aaKnown RBP18.68■□□□□ 0.58
SNRPF-201ENST00000266735 MYSM1Q5VVJ2 828 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 SDF4Q9BRK5 362 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 PKD2L1Q9P0L9 805 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 MTMR6Q9Y217 621 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 NFASCO94856 1347 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 KBTBD13C9JR72 458 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 IPO5O00410 1097 aaKnown RBP18.68■□□□□ 0.58
SNRPF-201ENST00000266735 CTAGE5O15320 804 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 ZEB2O60315 1214 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 FARP2O94887 1054 aaPredicted RBP18.68■□□□□ 0.58
SNRPF-201ENST00000266735 MYCNP04198 464 aaPredicted RBP18.68■□□□□ 0.58
SNRPF-201ENST00000266735 EN2P19622 333 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms