RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 F2P00734 622 aa17.36■□□□□ 0.37
UPK3A-201ENST00000216211 CCND2P30279 289 aa17.36■□□□□ 0.37
UPK3A-201ENST00000216211 SP2Q02086 613 aa17.36■□□□□ 0.37
UPK3A-201ENST00000216211 CCDC85BQ15834 202 aaPredicted RBP17.36■□□□□ 0.37
UPK3A-201ENST00000216211 KIAA0753Q2KHM9 967 aa17.36■□□□□ 0.37
UPK3A-201ENST00000216211 HSDL1Q3SXM5 330 aa17.36■□□□□ 0.37
UPK3A-201ENST00000216211 MYSM1Q5VVJ2 828 aa17.36■□□□□ 0.37
UPK3A-201ENST00000216211 KCNV1Q6PIU1 500 aa17.36■□□□□ 0.37
UPK3A-201ENST00000216211 AFAP1L1Q8TED9 768 aa17.36■□□□□ 0.37
UPK3A-201ENST00000216211 MYL10Q9BUA6 226 aa17.36■□□□□ 0.37
UPK3A-201ENST00000216211 HAS3O00219 553 aa17.35■□□□□ 0.37
UPK3A-201ENST00000216211 CA3P07451 260 aa17.35■□□□□ 0.37
UPK3A-201ENST00000216211 UBA1P22314 1058 aaKnown RBP17.35■□□□□ 0.37
UPK3A-201ENST00000216211 CELF3Q5SZQ8 465 aaKnown RBP17.35■□□□□ 0.37
UPK3A-201ENST00000216211 SPATA33Q96N06 139 aa17.35■□□□□ 0.37
UPK3A-201ENST00000216211 SLC9A7Q96T83 725 aa17.35■□□□□ 0.37
UPK3A-201ENST00000216211 LY9Q9HBG7 655 aa17.35■□□□□ 0.37
UPK3A-201ENST00000216211 RBAK-RBAKDNI3L0D1 243 aa17.34■□□□□ 0.37
UPK3A-201ENST00000216211 CKBP12277 381 aa17.34■□□□□ 0.37
UPK3A-201ENST00000216211 SELPP16109 830 aa17.34■□□□□ 0.37
UPK3A-201ENST00000216211 ZNF200P98182 395 aaPredicted RBP17.34■□□□□ 0.37
UPK3A-201ENST00000216211 GPNMBQ14956 572 aa17.34■□□□□ 0.37
UPK3A-201ENST00000216211 CASC1Q6TDU7 716 aa17.34■□□□□ 0.37
UPK3A-201ENST00000216211 LRRC8DQ7L1W4 858 aa17.34■□□□□ 0.37
UPK3A-201ENST00000216211 ZNF654Q8IZM8 581 aa17.34■□□□□ 0.37
UPK3A-201ENST00000216211 PHOSPHO2Q8TCD6 241 aa17.34■□□□□ 0.37
UPK3A-201ENST00000216211 BCAS3Q9H6U6 928 aa17.34■□□□□ 0.37
UPK3A-201ENST00000216211 CERS4Q9HA82 394 aa17.34■□□□□ 0.37
UPK3A-201ENST00000216211 MLXIPQ9HAP2 919 aa17.34■□□□□ 0.37
UPK3A-201ENST00000216211 COL4A4P53420 1690 aaPredicted RBP17.33■□□□□ 0.37
UPK3A-201ENST00000216211 PRC1O43663 620 aa17.33■□□□□ 0.36
UPK3A-201ENST00000216211 PPFIA4O75335 1185 aa17.33■□□□□ 0.36
UPK3A-201ENST00000216211 BAIAP3O94812 1187 aa17.33■□□□□ 0.36
UPK3A-201ENST00000216211 TGFB3P10600 412 aa17.33■□□□□ 0.36
UPK3A-201ENST00000216211 HOXD8P13378 290 aaPredicted RBP17.33■□□□□ 0.36
UPK3A-201ENST00000216211 RBL2Q08999 1139 aa17.33■□□□□ 0.36
UPK3A-201ENST00000216211 PTK7Q13308 1070 aa17.33■□□□□ 0.36
UPK3A-201ENST00000216211 COL9A3Q14050 684 aaPredicted RBP17.33■□□□□ 0.36
UPK3A-201ENST00000216211 HERC6Q8IVU3 1022 aa17.33■□□□□ 0.36
UPK3A-201ENST00000216211 CTCFLQ8NI51 663 aaPredicted RBP17.33■□□□□ 0.36
UPK3A-201ENST00000216211 SPZ1Q9BXG8 430 aa17.33■□□□□ 0.36
UPK3A-201ENST00000216211 LSG1Q9H089 658 aaKnown RBP17.33■□□□□ 0.36
UPK3A-201ENST00000216211 MICAL3Q7RTP6 2002 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 KAT6AQ92794 2004 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 FRMPD4Q14CM0 1322 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 RFXAPO00287 272 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 NBNO60934 754 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 DDAH1O94760 285 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 ARHGEF15O94989 841 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 KCNJ6P48051 423 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 MRPS9P82933 396 aaKnown RBP17.32■□□□□ 0.36
UPK3A-201ENST00000216211 HIC1Q14526 733 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 TCTN1Q2MV58 587 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 TJAP1Q5JTD0 557 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 MICALL1Q8N3F8 863 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 SYMPKQ92797 1274 aaKnown RBP17.32■□□□□ 0.36
UPK3A-201ENST00000216211 WNT8BQ93098 351 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 RRP36Q96EU6 259 aaKnown RBP17.32■□□□□ 0.36
UPK3A-201ENST00000216211 MAP3K14Q99558 947 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 C16orf70Q9BSU1 422 aa17.32■□□□□ 0.36
UPK3A-201ENST00000216211 SH2B2O14492 632 aaPredicted RBP17.31■□□□□ 0.36
UPK3A-201ENST00000216211 PLEKHA8P1O95397 391 aa17.31■□□□□ 0.36
UPK3A-201ENST00000216211 RXRAP19793 462 aa17.31■□□□□ 0.36
UPK3A-201ENST00000216211 KIF5BP33176 963 aa17.31■□□□□ 0.36
UPK3A-201ENST00000216211 WDR5P61964 334 aaKnown RBP17.31■□□□□ 0.36
UPK3A-201ENST00000216211 TRIM71Q2Q1W2 868 aaKnown RBP17.31■□□□□ 0.36
UPK3A-201ENST00000216211 GNPTABQ3T906 1256 aa17.31■□□□□ 0.36
UPK3A-201ENST00000216211 ZNF618Q5T7W0 954 aa17.31■□□□□ 0.36
UPK3A-201ENST00000216211 CNKSR3Q6P9H4 555 aa17.31■□□□□ 0.36
UPK3A-201ENST00000216211 USP17L6PQ6QN14 398 aa17.31■□□□□ 0.36
UPK3A-201ENST00000216211 NFXL1Q6ZNB6 911 aa17.31■□□□□ 0.36
UPK3A-201ENST00000216211 TMCO2Q7Z6W1 182 aaPredicted RBP17.31■□□□□ 0.36
UPK3A-201ENST00000216211 SMARCC2Q8TAQ2 1214 aa17.31■□□□□ 0.36
UPK3A-201ENST00000216211 ESYT1Q9BSJ8 1104 aa17.31■□□□□ 0.36
UPK3A-201ENST00000216211 RTEL1Q9NZ71 1219 aa17.31■□□□□ 0.36
UPK3A-201ENST00000216211 THEGQ9P2T0 379 aa17.31■□□□□ 0.36
UPK3A-201ENST00000216211 EPOPA6NHQ4 379 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 CCDC69A6NI79 296 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 KIF28PB7ZC32 967 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 SLC27A2O14975 620 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 PARNO95453 639 aaKnown RBP17.3■□□□□ 0.36
UPK3A-201ENST00000216211 CXCL10P02778 98 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 ICAM3P32942 547 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 MCM5P33992 734 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 DEFB103AP81534 67 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 SEMA3FQ13275 785 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 TRAF7Q6Q0C0 670 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 RAB11FIP4Q86YS3 637 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 CMTR1Q8N1G2 835 aaKnown RBP17.3■□□□□ 0.36
UPK3A-201ENST00000216211 SRBD1Q8N5C6 995 aaKnown RBP17.3■□□□□ 0.36
UPK3A-201ENST00000216211 TMEM87BQ96K49 555 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 INPP4AQ96PE3 977 aaPredicted RBP17.3■□□□□ 0.36
UPK3A-201ENST00000216211 MTA3Q9BTC8 594 aa17.3■□□□□ 0.36
UPK3A-201ENST00000216211 SEC63Q9UGP8 760 aaKnown RBP17.3■□□□□ 0.36
UPK3A-201ENST00000216211 TCF20Q9UGU0 1960 aaKnown RBP17.29■□□□□ 0.36
UPK3A-201ENST00000216211 SIP14410 1827 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 XIRP2A4UGR9 3374 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 SPATA31C2B4DYI2 1134 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 H3BRB1 525 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 TLL1O43897 1013 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms