RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Mrpl12Q9DB15 201 aaKnown RBP12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 MycbpQ9EQS3 103 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Irx5Q9JKQ4 484 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Frmpd4A2AFR3 1320 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Sh3tc1G3X9F6 1346 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Nhsl1Q8CAF4 1587 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Guca2bO09051 106 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Tcerg1lQ3B807 590 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Tsg101Q61187 391 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Yars2Q8BYL4 472 aaKnown RBP12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Csgalnact2Q8C1F4 542 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Lgi2Q8K4Z0 550 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ces1Q8VCC2 565 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Pla2g12bQ99P27 195 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Sept14Q9DA97 430 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Cntnap1O54991 1385 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Sec14l1A8Y5H7 715 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Zfp408H7BX78 710 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Slc2a13Q3UHK1 637 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Rnpc3Q3UZ01 514 aaKnown RBP12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ift20Q61025 132 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ddx3xQ62167 662 aaKnown RBP12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ces1eQ64176 562 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Camsap3Q80VC9 1252 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Dpp8Q80YA7 892 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Erlin2Q8BFZ9 340 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 NkrfQ8BY02 690 aaKnown RBP12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Tbc1d23Q8K0F1 684 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 HyiQ8R1F5 277 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Trap1Q9CQN1 706 aaKnown RBP12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 PdhbQ9D051 359 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Cmtr1Q9DBC3 837 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Plekhg2Q6KAU7 1340 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Myh13B1AR69 1938 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Nfxl1E9Q8I7 918 aaKnown RBP12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Fam183bQ5NC57 135 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Specc1Q5SXY1 1067 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Large2Q5XPT3 690 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Rhpn1Q61085 643 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 IntS13Q8QZV7 732 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Klhl20Q8VCK5 604 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Smtnl1Q99LM3 459 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ccnt1Q9QWV9 724 aaKnown RBP12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Angptl3Q9R182 455 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Trim10Q9WUH5 489 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Pnpla6Q3TRM4 1355 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Fdx1P46656 188 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Nedd4P46935 887 aaKnown RBP12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Kcnma1Q08460 1209 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Mybpc2Q5XKE0 1136 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Glg1Q61543 1175 aaKnown RBP12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Arfgap2Q99K28 520 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Lztr1Q9CQ33 837 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ecm29Q6PDI5 1840 aa12.74□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ap1m1P35585 423 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Rassf2Q8BMS9 326 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Cdk17Q8K0D0 523 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Alg1Q921Q3 482 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Txnrd3Q99MD6 652 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 4930550L24RikQ99PA7 320 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ears2Q9CXJ1 523 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Capn9Q9D805 690 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ccdc89Q9DA73 370 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 CoasyQ9DBL7 563 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 XlrP05531 208 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Arhgap44Q5SSM3 814 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Tsga10Q6NY15 697 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Actn1Q7TPR4 892 aaKnown RBP12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Rexo1Q7TT28 1213 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Lrrc57Q9D1G5 239 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 UvssaQ9D479 717 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 GabreA2AMW3 916 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Rsbn1lD3Z0K6 821 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Kctd16Q5DTY9 427 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Gas8Q60779 478 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Cypt2Q6P924 180 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Fnbp1Q80TY0 616 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Znf18Q810A1 556 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Q8BWG4 1187 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Spats2Q8K1N4 545 aaKnown RBP12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Znrd1-asQ8R0E5 213 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Kctd10Q922M3 315 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Abcf2Q99LE6 628 aaKnown RBP12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ppp1r3gQ9CW07 347 aa12.73□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Tmod1P49813 359 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Nap1l2P51860 460 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 1810065E05RikQ5NC41 235 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Kcnj11Q61743 390 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Zbed4Q80WQ9 1168 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Cgref1Q8R1U2 281 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Zkscan3Q91VW9 553 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Dhx58Q99J87 678 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Haus2Q9CQS9 234 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Zcrb1Q9CZ96 217 aaKnown RBP12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Spata17Q9D552 379 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Tbx18Q9EPZ6 613 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Hnrnph3D3Z3N4 346 aaKnown RBP12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Pls1Q3V0K9 630 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 PRAG1Q571I4 1179 aa12.72□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Sh3gl2Q62420 352 aa12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms