RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Ddx47Q9CWX9 455 aaKnown RBP10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Angptl3Q9R182 455 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Slc12a7Q9WVL3 1083 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Nfxl1E9Q8I7 918 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Samd15F6XZJ7 620 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Trim55G3X8Y1 545 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Grem2O88273 168 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 LdhaP06151 332 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Kif22Q3V300 660 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Trpc6Q61143 930 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Glra4Q61603 456 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ddx3xQ62167 662 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Dhx37Q6NZL1 1150 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Herc4Q6PAV2 1057 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Clca4aQ6Q473 924 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Pip5kl1Q6U7H8 395 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Olfr832Q7TRG9 312 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Dpp8Q80YA7 892 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Thap3Q8BJ25 218 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Kbtbd4Q8R179 534 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Smco2Q9DA21 347 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Arfgef1G3X9K3 1846 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Dnai2A2AC93 623 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Arhgap4B1AUY3 965 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Stat3P42227 770 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Hdgfl1Q2VPR5 283 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Nr1d1Q3UV55 615 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Klra4Q60651 263 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Gas8Q60779 478 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 GartQ64737 1010 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Fam196bQ6GQV1 535 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Lgi2Q8K4Z0 550 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Arfgap2Q99K28 520 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ndufab1Q9CR21 156 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 AdnpQ9Z103 1108 aaKnown RBP10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Sh3tc1G3X9F6 1346 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 XlrP05531 208 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Eps15P42567 897 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Fdx1P46656 188 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Gcnt1Q09324 428 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Fam178bQ24JP3 464 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Fhdc1Q3ULZ2 1149 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Pls1Q3V0K9 630 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Kctd1Q5M956 257 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Specc1Q5SXY1 1067 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ppm1eQ80TL0 749 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Slc51bQ80WK2 128 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ddx19bQ8BZY3 494 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Vps37cQ8R105 352 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 FignQ9ERZ6 759 aa10.79□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Msh3P13705 1091 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 SltmQ8CH25 1031 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 ParnQ8VDG3 624 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Spata17Q9D552 379 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ascc1Q9D8Z1 356 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 NapaQ9DB05 295 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Nlrp5Q9R1M5 1163 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Fxr2Q9WVR4 673 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Adgrf5G5E8Q8 1348 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Qtrt2B8ZXI1 415 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Stat4P42228 749 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Gjb6P70689 261 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ppp4cP97470 307 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Gas1Q01721 343 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 HelqQ2VPA6 1069 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Nlrp2Q4PLS0 1046 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ift20Q61025 132 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Atxn2lQ7TQH0 1049 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Cog5Q8C0L8 829 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Tsnaxip1Q99P25 704 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Tmem191cQ9JJB1 302 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Rps6ka4Q9Z2B9 773 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Fgd3O88842 733 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Rnpc3Q3UZ01 514 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Meis1Q60954 390 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Sh3gl2Q62420 352 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 SugctQ7TNE1 436 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Phf8Q80TJ7 1023 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Bola2Q8BGS2 86 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 GanQ8CA72 597 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 RnmtQ9D0L8 465 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Tex21Q9R0U9 575 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Slfn1Q9Z0I7 337 aa10.78□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Gm28510A0A087WP28 240 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Btbd18A0A0A6YY25 723 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 1700016G14RikA0A286YCZ6 238 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 1700003F12RikA2AKE5 210 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Magea10A2AMW4 325 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Gm1758F6VZZ1 202 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ap1m1P35585 423 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Pnma5Q5DTT8 618 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ccpg1Q640L3 753 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Haus6Q6NV99 933 aaKnown RBP10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 DaglaQ6WQJ1 1044 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Fermt3Q8K1B8 665 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Alg1Q921Q3 482 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 RtcbQ99LF4 505 aaKnown RBP10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ppp1r3aQ99MR9 1089 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Kif17Q99PW8 1038 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Capn9Q9D805 690 aa10.77□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms