RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN7	YPR108W	YJR030C	P47101	745 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	BIR1	P47134	954 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	MNT2	P53059	558 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	NQM1	P53228	333 aa	Predicted RBP	5.68	□□□□□ -1.5
RPN7	YPR108W	TWF1	P53250	332 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	CIK1	Q01649	594 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	YPL107W	Q02873	248 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	YDR132C	Q03900	495 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	YDR124W	Q04608	324 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	YEH1	Q07804	573 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	NDD1	Q08887	554 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	MRH1	Q12117	320 aa	Predicted RBP	5.68	□□□□□ -1.5
RPN7	YPR108W	GLE1	Q12315	538 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	MHF1	Q3E835	90 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	MPD2	Q99316	277 aa		5.68	□□□□□ -1.5
RPN7	YPR108W	RAD7	P06779	565 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	SWI5	P08153	709 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	TUB1	P09733	447 aa	Known RBP	5.67	□□□□□ -1.5
RPN7	YPR108W	YAR066W	P0CX18	203 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	YHR214W	P0CX19	203 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	PHO81	P17442	1178 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	YCK2	P23292	546 aa	Known RBP	5.67	□□□□□ -1.5
RPN7	YPR108W	POL4	P25615	582 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	DPH5	P32469	300 aa	Predicted RBP	5.67	□□□□□ -1.5
RPN7	YPR108W	NUP2	P32499	720 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	PEX6	P33760	1030 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	SKG1	P36169	355 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	PDX3	P38075	228 aa	Known RBP	5.67	□□□□□ -1.5
RPN7	YPR108W	FMP23	P38231	175 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	YHR020W	P38708	688 aa	Known RBP	5.67	□□□□□ -1.5
RPN7	YPR108W	PEX18	P38855	283 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	FAD1	P38913	306 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	PAN6	P40459	309 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	MAD2	P40958	196 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	AMA1	P50082	593 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	ROM1	P53046	1155 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	YGR015C	P53208	328 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	DCP2	P53550	970 aa	Known RBP	5.67	□□□□□ -1.5
RPN7	YPR108W	RPN4	Q03465	531 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	GAS3	Q03655	524 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	RAD30	Q04049	632 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	ARP10	Q04549	284 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	RIF2	Q06208	395 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	BDS1	Q08347	646 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	RPN8	Q08723	338 aa	Known RBP	5.67	□□□□□ -1.5
RPN7	YPR108W	GPB1	Q08886	897 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	YPR011C	Q12251	326 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	RIB3	Q99258	208 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	MED11	Q99278	115 aa		5.67	□□□□□ -1.5
RPN7	YPR108W	UBR2	Q07963	1872 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	RPP2B	P02400	110 aa	Known RBP	5.66	□□□□□ -1.5
RPN7	YPR108W	STE7	P06784	515 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	FUS1	P11710	512 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	RAP1	P11938	827 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	SPT15	P13393	240 aa	Known RBP	5.66	□□□□□ -1.5
RPN7	YPR108W	GUK1	P15454	187 aa	Known RBP	5.66	□□□□□ -1.5
RPN7	YPR108W	PRI2	P20457	528 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	KIN3	P22209	435 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	DPB2	P24482	689 aa	Predicted RBP	5.66	□□□□□ -1.5
RPN7	YPR108W	CMK1	P27466	446 aa	Known RBP	5.66	□□□□□ -1.5
RPN7	YPR108W	FUN30	P31380	1131 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	ATO2	P32907	282 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	TIF3	P34167	436 aa	Known RBP	5.66	□□□□□ -1.5
RPN7	YPR108W	SIF2	P38262	535 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	YBR138C	P38277	524 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	COS111	P38308	924 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	YHR078W	P38799	552 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	DDI1	P40087	428 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	YIR007W	P40566	764 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	TES1	P41903	349 aa	Known RBP	5.66	□□□□□ -1.5
RPN7	YPR108W	STB2	P46679	850 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	YJR154W	P47181	346 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	COG5	P53951	403 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	PEX13	P80667	386 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	PNG1	Q02890	363 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	ISU1	Q03020	165 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	HOT1	Q03213	719 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	MUS81	Q04149	632 aa	Predicted RBP	5.66	□□□□□ -1.5
RPN7	YPR108W	GLO2	Q05584	274 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	YHC1	Q05900	231 aa	Known RBP	5.66	□□□□□ -1.5
RPN7	YPR108W	FAR10	Q06001	478 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	YLR346C	Q06139	101 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	VPS74	Q06385	345 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	GPI11	Q06636	219 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	LOT6	Q07923	191 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	XYL2	Q07993	356 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	PUS7	Q08647	676 aa	Known RBP	5.66	□□□□□ -1.5
RPN7	YPR108W	HER1	Q12276	1246 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	LSO1	Q3E827	93 aa		5.66	□□□□□ -1.5
RPN7	YPR108W	LEU1	P07264	779 aa	Known RBP	5.65	□□□□□ -1.5
RPN7	YPR108W	GAL3	P13045	520 aa		5.65	□□□□□ -1.5
RPN7	YPR108W	SGV1	P23293	657 aa	Known RBP	5.65	□□□□□ -1.5
RPN7	YPR108W	MEF1	P25039	761 aa		5.65	□□□□□ -1.5
RPN7	YPR108W	CTS1	P29029	562 aa		5.65	□□□□□ -1.5
RPN7	YPR108W	PET127	P32606	800 aa		5.65	□□□□□ -1.5
RPN7	YPR108W	RPT5	P33297	434 aa	Known RBP	5.65	□□□□□ -1.5
RPN7	YPR108W	DEF1	P35732	738 aa	Known RBP	5.65	□□□□□ -1.5
RPN7	YPR108W	GMH1	P36125	273 aa		5.65	□□□□□ -1.5
RPN7	YPR108W	SIC1	P38634	284 aa		5.65	□□□□□ -1.5
RPN7	YPR108W	YHR112C	P38716	378 aa		5.65	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 115 ms