RNA–Protein interactions for RNA: YOR316C

COT1, Transcript of Vacuolar transporter that mediates zinc transport into the vacuole, yeast

Gene COT1, Length 1,320 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COT1	YOR316C	YLR358C	O13565	187 aa		4.87	□□□□□ -1.63
COT1	YOR316C	SEM1	O94742	89 aa		4.87	□□□□□ -1.63
COT1	YOR316C	MSS18	P08593	268 aa		4.87	□□□□□ -1.63
COT1	YOR316C	ILS1	P09436	1072 aa	Known RBP	4.87	□□□□□ -1.63
COT1	YOR316C	ADH4	P10127	382 aa		4.87	□□□□□ -1.63
COT1	YOR316C	HOP1	P20050	605 aa		4.87	□□□□□ -1.63
COT1	YOR316C	EPT1	P22140	391 aa		4.87	□□□□□ -1.63
COT1	YOR316C	MRPL25	P23369	157 aa		4.87	□□□□□ -1.63
COT1	YOR316C	YSP3	P25036	478 aa		4.87	□□□□□ -1.63
COT1	YOR316C	IMG1	P25626	169 aa		4.87	□□□□□ -1.63
COT1	YOR316C	RFA2	P26754	273 aa	Known RBP	4.87	□□□□□ -1.63
COT1	YOR316C	URA7	P28274	579 aa	Known RBP	4.87	□□□□□ -1.63
COT1	YOR316C	DAL3	P32459	195 aa		4.87	□□□□□ -1.63
COT1	YOR316C	VMA8	P32610	256 aa	Known RBP	4.87	□□□□□ -1.63
COT1	YOR316C	YME1	P32795	747 aa		4.87	□□□□□ -1.63
COT1	YOR316C	YKR078W	P36158	585 aa	Known RBP	4.87	□□□□□ -1.63
COT1	YOR316C	LYS1	P38998	373 aa	RIP-Chip data	4.87	□□□□□ -1.63	not detected
COT1	YOR316C	EMP65	P40085	556 aa		4.87	□□□□□ -1.63
COT1	YOR316C	PXA1	P41909	870 aa		4.87	□□□□□ -1.63
COT1	YOR316C	QRI7	P43122	407 aa		4.87	□□□□□ -1.63
COT1	YOR316C	NMD5	P46970	1048 aa		4.87	□□□□□ -1.63
COT1	YOR316C	HOL1	P53389	586 aa		4.87	□□□□□ -1.63
COT1	YOR316C	YPR071W	Q12346	211 aa		4.87	□□□□□ -1.63
COT1	YOR316C	MDM35	O60200	86 aa		4.86	□□□□□ -1.63
COT1	YOR316C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
COT1	YOR316C	RBK1	P25332	333 aa		4.86	□□□□□ -1.63
COT1	YOR316C	DCC1	P25559	380 aa		4.86	□□□□□ -1.63
COT1	YOR316C	KAR4	P25583	335 aa		4.86	□□□□□ -1.63
COT1	YOR316C	URA10	P30402	227 aa		4.86	□□□□□ -1.63
COT1	YOR316C	RPC82	P32349	654 aa		4.86	□□□□□ -1.63
COT1	YOR316C	AEP1	P32493	518 aa		4.86	□□□□□ -1.63
COT1	YOR316C	SMI1	P32566	505 aa		4.86	□□□□□ -1.63
COT1	YOR316C	SPC29	P33419	253 aa		4.86	□□□□□ -1.63
COT1	YOR316C	STB6	P36085	766 aa		4.86	□□□□□ -1.63
COT1	YOR316C	MRPL15	P36523	253 aa		4.86	□□□□□ -1.63
COT1	YOR316C	YBP1	P38315	674 aa		4.86	□□□□□ -1.63
COT1	YOR316C	YHR033W	P38690	423 aa		4.86	□□□□□ -1.63
COT1	YOR316C	DED81	P38707	554 aa	Known RBP	4.86	□□□□□ -1.63
COT1	YOR316C	TOK1	P40310	691 aa		4.86	□□□□□ -1.63
COT1	YOR316C	LRO1	P40345	661 aa		4.86	□□□□□ -1.63
COT1	YOR316C	YNL320W	P42840	284 aa		4.86	□□□□□ -1.63
COT1	YOR316C	ELP2	P42935	788 aa		4.86	□□□□□ -1.63
COT1	YOR316C	YJR039W	P47107	1121 aa		4.86	□□□□□ -1.63
COT1	YOR316C	TAH11	P47112	604 aa		4.86	□□□□□ -1.63
COT1	YOR316C	YGR016W	P53209	190 aa		4.86	□□□□□ -1.63
COT1	YOR316C	NUP100	Q02629	959 aa		4.86	□□□□□ -1.63
COT1	YOR316C	SHR3	Q02774	210 aa		4.86	□□□□□ -1.63
COT1	YOR316C	RRB1	Q04225	511 aa	Known RBP	4.86	□□□□□ -1.63
COT1	YOR316C	EMI1	Q04406	187 aa		4.86	□□□□□ -1.63
COT1	YOR316C	YDR109C	Q04585	715 aa		4.86	□□□□□ -1.63
COT1	YOR316C	RRP45	Q05636	305 aa	Known RBP	4.86	□□□□□ -1.63
COT1	YOR316C	PSR1	Q07800	427 aa		4.86	□□□□□ -1.63
COT1	YOR316C	SEC16	P48415	2195 aa	Known RBP	4.86	□□□□□ -1.63
COT1	YOR316C	YPT1	P01123	206 aa	Known RBP	4.85	□□□□□ -1.63
COT1	YOR316C	CMD1	P06787	147 aa	Known RBP	4.85	□□□□□ -1.63
COT1	YOR316C	GPA2	P10823	449 aa		4.85	□□□□□ -1.63
COT1	YOR316C	CBF1	P17106	351 aa		4.85	□□□□□ -1.63
COT1	YOR316C	CLN1	P20437	546 aa		4.85	□□□□□ -1.63
COT1	YOR316C	RER1	P25560	188 aa		4.85	□□□□□ -1.63
COT1	YOR316C	GID7	P25569	745 aa		4.85	□□□□□ -1.63
COT1	YOR316C	YCL068C	P25593	260 aa		4.85	□□□□□ -1.63
COT1	YOR316C	CPR3	P25719	182 aa		4.85	□□□□□ -1.63
COT1	YOR316C	MKK1	P32490	508 aa		4.85	□□□□□ -1.63
COT1	YOR316C	SPS19	P32573	292 aa	Known RBP	4.85	□□□□□ -1.63
COT1	YOR316C	GMH1	P36125	273 aa		4.85	□□□□□ -1.63
COT1	YOR316C	MOH1	P38191	138 aa		4.85	□□□□□ -1.63
COT1	YOR316C	CYC2	P38909	366 aa		4.85	□□□□□ -1.63
COT1	YOR316C	SER3	P40054	469 aa		4.85	□□□□□ -1.63
COT1	YOR316C	MET12	P46151	657 aa		4.85	□□□□□ -1.63
COT1	YOR316C	HOS2	P53096	452 aa	Predicted RBP	4.85	□□□□□ -1.63
COT1	YOR316C	SLD3	P53135	668 aa		4.85	□□□□□ -1.63
COT1	YOR316C	TIM13	P53299	105 aa		4.85	□□□□□ -1.63
COT1	YOR316C	REG1	Q00816	1014 aa		4.85	□□□□□ -1.63
COT1	YOR316C	CCE1	Q03702	353 aa		4.85	□□□□□ -1.63
COT1	YOR316C	YET2	Q04210	160 aa		4.85	□□□□□ -1.63
COT1	YOR316C	CIA1	Q05583	330 aa		4.85	□□□□□ -1.63
COT1	YOR316C	BLS1	Q06071	122 aa		4.85	□□□□□ -1.63
COT1	YOR316C	TMA10	Q06177	86 aa		4.85	□□□□□ -1.63
COT1	YOR316C	YDL218W	Q07629	317 aa		4.85	□□□□□ -1.63
COT1	YOR316C	CUE5	Q08412	411 aa	Known RBP	4.85	□□□□□ -1.63
COT1	YOR316C	DIN7	Q12086	430 aa		4.85	□□□□□ -1.63
COT1	YOR316C	YRA1	Q12159	226 aa	Known RBP	4.85	□□□□□ -1.63
COT1	YOR316C	CPA1	P07258	411 aa	Known RBP	4.84	□□□□□ -1.63
COT1	YOR316C	SSA3	P09435	649 aa	Known RBP	4.84	□□□□□ -1.63
COT1	YOR316C	MSH1	P25846	959 aa		4.84	□□□□□ -1.63
COT1	YOR316C	NIP1	P32497	812 aa	Known RBP	4.84	□□□□□ -1.63
COT1	YOR316C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
COT1	YOR316C	IMP3	P32899	183 aa	Predicted RBP	4.84	□□□□□ -1.63
COT1	YOR316C	PHO11	P35842	467 aa		4.84	□□□□□ -1.63
COT1	YOR316C	NTR2	P36118	322 aa	Predicted RBP	4.84	□□□□□ -1.63
COT1	YOR316C	MRP21	P38175	177 aa		4.84	□□□□□ -1.63
COT1	YOR316C	YSW1	P38280	609 aa		4.84	□□□□□ -1.63
COT1	YOR316C	PHO12	P38693	467 aa		4.84	□□□□□ -1.63
COT1	YOR316C	REV7	P38927	245 aa		4.84	□□□□□ -1.63
COT1	YOR316C	DHH1	P39517	506 aa	Known RBP	4.84	□□□□□ -1.63
COT1	YOR316C	YFR020W	P43600	232 aa		4.84	□□□□□ -1.63
COT1	YOR316C	GPI8	P49018	411 aa		4.84	□□□□□ -1.63
COT1	YOR316C	PRP31	P49704	494 aa	Predicted RBP	4.84	□□□□□ -1.63
COT1	YOR316C	SAP4	P53036	818 aa		4.84	□□□□□ -1.63
COT1	YOR316C	RAI1	P53063	387 aa	Known RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 144.2 ms