RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W YCR007CP25354 239 aa3.12□□□□□ -1.91
SRL1YOR247W RHB1P25378 209 aa3.12□□□□□ -1.91
SRL1YOR247W BEM1P29366 551 aa3.12□□□□□ -1.91
SRL1YOR247W SIN4P32259 974 aa3.12□□□□□ -1.91
SRL1YOR247W ATP11P32453 318 aa3.12□□□□□ -1.91
SRL1YOR247W PRP21P32524 280 aaPredicted RBP3.12□□□□□ -1.91
SRL1YOR247W RPS0AP32905 252 aaKnown RBP3.12□□□□□ -1.91
SRL1YOR247W LAS1P36146 502 aaPredicted RBP3.12□□□□□ -1.91
SRL1YOR247W SPC97P38863 823 aa3.12□□□□□ -1.91
SRL1YOR247W PCL6P40038 420 aa3.12□□□□□ -1.91
SRL1YOR247W YMR147WP40218 223 aaKnown RBP3.12□□□□□ -1.91
SRL1YOR247W YTA12P40341 825 aa3.12□□□□□ -1.91
SRL1YOR247W SYG1P40528 902 aa3.12□□□□□ -1.91
SRL1YOR247W YIR016WP40572 265 aa3.12□□□□□ -1.91
SRL1YOR247W MLC1P53141 149 aa3.12□□□□□ -1.91
SRL1YOR247W DRN1P53255 507 aaKnown RBP3.12□□□□□ -1.91
SRL1YOR247W YPL107WQ02873 248 aa3.12□□□□□ -1.91
SRL1YOR247W MSS11Q03825 758 aa3.12□□□□□ -1.91
SRL1YOR247W PPM1Q04081 328 aa3.12□□□□□ -1.91
SRL1YOR247W PHO92Q06390 306 aa3.12□□□□□ -1.91
SRL1YOR247W YEH2Q07950 538 aa3.12□□□□□ -1.91
SRL1YOR247W PGC1Q08959 321 aa3.12□□□□□ -1.91
SRL1YOR247W RKM1Q08961 583 aaPredicted RBP3.12□□□□□ -1.91
SRL1YOR247W LSP1Q12230 341 aaKnown RBP3.12□□□□□ -1.91
SRL1YOR247W YDR061WQ12298 539 aa3.12□□□□□ -1.91
SRL1YOR247W YER190C-BP0CX94 160 aa3.11□□□□□ -1.91
SRL1YOR247W YEL077W-AP0CX95 160 aa3.11□□□□□ -1.91
SRL1YOR247W YGR296C-BP0CX96 160 aa3.11□□□□□ -1.91
SRL1YOR247W YPL283W-BP0CX97 160 aa3.11□□□□□ -1.91
SRL1YOR247W YPR204C-AP0CX98 160 aa3.11□□□□□ -1.91
SRL1YOR247W VMA2P16140 517 aaKnown RBP3.11□□□□□ -1.91
SRL1YOR247W SEC62P21825 274 aa3.11□□□□□ -1.91
SRL1YOR247W MGR1P25573 417 aa3.11□□□□□ -1.91
SRL1YOR247W MSP1P28737 362 aa3.11□□□□□ -1.91
SRL1YOR247W RSM22P36056 628 aa3.11□□□□□ -1.91
SRL1YOR247W SPC34P36131 295 aa3.11□□□□□ -1.91
SRL1YOR247W ZTA1P38230 334 aaKnown RBP3.11□□□□□ -1.91
SRL1YOR247W OSH3P38713 996 aaKnown RBP3.11□□□□□ -1.91
SRL1YOR247W SER3P40054 469 aa3.11□□□□□ -1.91
SRL1YOR247W VHS2P40463 436 aa3.11□□□□□ -1.91
SRL1YOR247W MDV1P47025 714 aa3.11□□□□□ -1.91
SRL1YOR247W YJR011CP47086 261 aaPredicted RBP3.11□□□□□ -1.91
SRL1YOR247W TOM22P49334 152 aa3.11□□□□□ -1.91
SRL1YOR247W RPL15BP54780 204 aaPredicted RBP3.11□□□□□ -1.91
SRL1YOR247W SLD5Q03406 294 aa3.11□□□□□ -1.91
SRL1YOR247W YDR415CQ04033 374 aaPredicted RBP3.11□□□□□ -1.91
SRL1YOR247W YDR286CQ05530 114 aa3.11□□□□□ -1.91
SRL1YOR247W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
SRL1YOR247W NFI1Q12216 726 aa3.11□□□□□ -1.91
SRL1YOR247W UBX3Q12229 455 aa3.11□□□□□ -1.91
SRL1YOR247W CAR1P00812 333 aaKnown RBP3.1□□□□□ -1.91
SRL1YOR247W STF1P01098 86 aa3.1□□□□□ -1.91
SRL1YOR247W SCEIP03882 235 aa3.1□□□□□ -1.91
SRL1YOR247W PMR1P13586 950 aa3.1□□□□□ -1.91
SRL1YOR247W TRX1P22217 103 aaKnown RBP3.1□□□□□ -1.91
SRL1YOR247W PHO84P25297 587 aaKnown RBP3.1□□□□□ -1.91
SRL1YOR247W RPS2P25443 254 aaKnown RBP3.1□□□□□ -1.91
SRL1YOR247W ACH1P32316 526 aa3.1□□□□□ -1.91
SRL1YOR247W RIM1P32445 135 aaKnown RBP3.1□□□□□ -1.91
SRL1YOR247W RAD24P32641 659 aa3.1□□□□□ -1.91
SRL1YOR247W ASC1P38011 319 aaKnown RBP3.1□□□□□ -1.91
SRL1YOR247W OLA1P38219 394 aaKnown RBP3.1□□□□□ -1.91
SRL1YOR247W EFM2P38347 419 aa3.1□□□□□ -1.91
SRL1YOR247W KEL1P38853 1164 aaKnown RBP3.1□□□□□ -1.91
SRL1YOR247W FAU1P40099 211 aa3.1□□□□□ -1.91
SRL1YOR247W BNA3P47039 444 aaKnown RBP3.1□□□□□ -1.91
SRL1YOR247W ECM27P47144 725 aa3.1□□□□□ -1.91
SRL1YOR247W PIB2P53191 635 aa3.1□□□□□ -1.91
SRL1YOR247W YIF1P53845 314 aaKnown RBP3.1□□□□□ -1.91
SRL1YOR247W RHO5P53879 331 aaKnown RBP3.1□□□□□ -1.91
SRL1YOR247W TDA7P53882 636 aaPredicted RBP3.1□□□□□ -1.91
SRL1YOR247W ESBP6P53918 673 aa3.1□□□□□ -1.91
SRL1YOR247W STP1Q00947 519 aa3.1□□□□□ -1.91
SRL1YOR247W MEH1Q02205 184 aa3.1□□□□□ -1.91
SRL1YOR247W YDR387CQ04162 555 aa3.1□□□□□ -1.91
SRL1YOR247W YMR254CQ04838 102 aa3.1□□□□□ -1.91
SRL1YOR247W YLR456WQ06199 204 aa3.1□□□□□ -1.91
SRL1YOR247W VPS74Q06385 345 aa3.1□□□□□ -1.91
SRL1YOR247W THI20Q08224 551 aa3.1□□□□□ -1.91
SRL1YOR247W CUE5Q08412 411 aaKnown RBP3.1□□□□□ -1.91
SRL1YOR247W NRT1Q08485 598 aa3.1□□□□□ -1.91
SRL1YOR247W TY1B-AO13527 1196 aaKnown RBP3.09□□□□□ -1.91
SRL1YOR247W HIS4P00815 799 aaKnown RBP3.09□□□□□ -1.91
SRL1YOR247W RPL42AP0CX27 106 aaKnown RBP3.09□□□□□ -1.91
SRL1YOR247W RPL42BP0CX28 106 aaKnown RBP3.09□□□□□ -1.91
SRL1YOR247W MDM10P18409 493 aa3.09□□□□□ -1.91
SRL1YOR247W RPI1P23250 407 aaKnown RBP3.09□□□□□ -1.91
SRL1YOR247W GEX1P25596 615 aa3.09□□□□□ -1.91
SRL1YOR247W BUB3P26449 341 aa3.09□□□□□ -1.91
SRL1YOR247W APE2P32454 952 aaKnown RBP3.09□□□□□ -1.91
SRL1YOR247W ECM15P35195 104 aa3.09□□□□□ -1.91
SRL1YOR247W RRN10P38204 145 aa3.09□□□□□ -1.91
SRL1YOR247W RFC3P38629 340 aa3.09□□□□□ -1.91
SRL1YOR247W FAD1P38913 306 aa3.09□□□□□ -1.91
SRL1YOR247W POP2P39008 433 aa3.09□□□□□ -1.91
SRL1YOR247W CCT2P39076 527 aaKnown RBP3.09□□□□□ -1.91
SRL1YOR247W PCI8P40512 444 aa3.09□□□□□ -1.91
SRL1YOR247W ELP2P42935 788 aa3.09□□□□□ -1.91
SRL1YOR247W EPL1P43572 832 aa3.09□□□□□ -1.91
SRL1YOR247W GAT1P43574 510 aa3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms