RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W HEL1P36113 551 aa3.45□□□□□ -1.86
VPS17YOR132W ARC40P38328 384 aaKnown RBP3.45□□□□□ -1.86
VPS17YOR132W STB2P46679 850 aa3.45□□□□□ -1.86
VPS17YOR132W AAD10P47182 288 aa3.45□□□□□ -1.86
VPS17YOR132W LCL3P53153 274 aa3.45□□□□□ -1.86
VPS17YOR132W CUL3P53202 744 aa3.45□□□□□ -1.86
VPS17YOR132W INN1P53901 409 aa3.45□□□□□ -1.86
VPS17YOR132W ASI1P54074 624 aa3.45□□□□□ -1.86
VPS17YOR132W IZH1Q03419 316 aa3.45□□□□□ -1.86
VPS17YOR132W ARX1Q03862 593 aaKnown RBP3.45□□□□□ -1.86
VPS17YOR132W YMR034CQ05131 434 aaPredicted RBP3.45□□□□□ -1.86
VPS17YOR132W PHO92Q06390 306 aa3.45□□□□□ -1.86
VPS17YOR132W RIX7Q07844 837 aaKnown RBP3.45□□□□□ -1.86
VPS17YOR132W NUS1Q12063 375 aa3.45□□□□□ -1.86
VPS17YOR132W VCX1Q99385 411 aa3.45□□□□□ -1.86
VPS17YOR132W POM152P39685 1337 aa3.44□□□□□ -1.86
VPS17YOR132W YFL068WP0CX99 160 aa3.44□□□□□ -1.86
VPS17YOR132W YLL066W-AP0CY00 160 aa3.44□□□□□ -1.86
VPS17YOR132W YLL067W-AP0CY01 160 aa3.44□□□□□ -1.86
VPS17YOR132W COQ1P18900 473 aa3.44□□□□□ -1.86
VPS17YOR132W VPS1P21576 704 aaKnown RBP3.44□□□□□ -1.86
VPS17YOR132W PRE8P23639 250 aa3.44□□□□□ -1.86
VPS17YOR132W YCR043CP25361 127 aa3.44□□□□□ -1.86
VPS17YOR132W DAL80P26343 269 aa3.44□□□□□ -1.86
VPS17YOR132W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
VPS17YOR132W UBP11P36026 717 aa3.44□□□□□ -1.86
VPS17YOR132W ADH5P38113 351 aaKnown RBP3.44□□□□□ -1.86
VPS17YOR132W REG2P38232 338 aa3.44□□□□□ -1.86
VPS17YOR132W OSW5P40219 148 aa3.44□□□□□ -1.86
VPS17YOR132W VMA13P41807 478 aaKnown RBP3.44□□□□□ -1.86
VPS17YOR132W GCD10P41814 478 aa3.44□□□□□ -1.86
VPS17YOR132W MEP2P41948 499 aa3.44□□□□□ -1.86
VPS17YOR132W ROY1Q04847 553 aa3.44□□□□□ -1.86
VPS17YOR132W YLR456WQ06199 204 aa3.44□□□□□ -1.86
VPS17YOR132W MCP2Q06567 569 aa3.44□□□□□ -1.86
VPS17YOR132W APL5Q08951 932 aaKnown RBP3.44□□□□□ -1.86
VPS17YOR132W RPN5Q12250 445 aaKnown RBP3.44□□□□□ -1.86
VPS17YOR132W SPE4Q12455 300 aa3.44□□□□□ -1.86
VPS17YOR132W CBP1P07252 654 aa3.43□□□□□ -1.86
VPS17YOR132W OM45P16547 393 aa3.43□□□□□ -1.86
VPS17YOR132W CPR2P23285 205 aa3.43□□□□□ -1.86
VPS17YOR132W SUR1P33300 382 aa3.43□□□□□ -1.86
VPS17YOR132W YKT6P36015 200 aaKnown RBP3.43□□□□□ -1.86
VPS17YOR132W MNN2P38069 597 aa3.43□□□□□ -1.86
VPS17YOR132W PCH2P38126 564 aa3.43□□□□□ -1.86
VPS17YOR132W MET30P39014 640 aa3.43□□□□□ -1.86
VPS17YOR132W VRG4P40107 337 aa3.43□□□□□ -1.86
VPS17YOR132W SGN1P40561 250 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
VPS17YOR132W TES1P41903 349 aaKnown RBP3.43□□□□□ -1.86
VPS17YOR132W MNP1P53163 194 aaPredicted RBP3.43□□□□□ -1.86
VPS17YOR132W IST1P53843 298 aaPredicted RBP3.43□□□□□ -1.86
VPS17YOR132W MUB1Q03162 620 aa3.43□□□□□ -1.86
VPS17YOR132W ARP10Q04549 284 aa3.43□□□□□ -1.86
VPS17YOR132W YLR281CQ05863 155 aa3.43□□□□□ -1.86
VPS17YOR132W SPH1Q06160 661 aa3.43□□□□□ -1.86
VPS17YOR132W PML1Q07930 204 aaPredicted RBP3.43□□□□□ -1.86
VPS17YOR132W MDY2Q12285 212 aa3.43□□□□□ -1.86
VPS17YOR132W AFI1Q99222 893 aa3.43□□□□□ -1.86
VPS17YOR132W FAS2P19097 1887 aaKnown RBP3.43□□□□□ -1.86
VPS17YOR132W NIP1P32497 812 aaKnown RBP3.43□□□□□ -1.86
VPS17YOR132W YEL043WP32618 956 aa3.43□□□□□ -1.86
VPS17YOR132W LTV1P34078 463 aa3.43□□□□□ -1.86
VPS17YOR132W CST26P38226 397 aa3.43□□□□□ -1.86
VPS17YOR132W VID24P38263 362 aa3.43□□□□□ -1.86
VPS17YOR132W YHR054CP38780 354 aa3.43□□□□□ -1.86
VPS17YOR132W YHR131CP38835 850 aa3.43□□□□□ -1.86
VPS17YOR132W LYS4P49367 693 aaPredicted RBP3.43□□□□□ -1.86
VPS17YOR132W SHE10P53075 577 aa3.43□□□□□ -1.86
VPS17YOR132W DON1Q05610 365 aa3.43□□□□□ -1.86
VPS17YOR132W APC5Q08683 685 aa3.43□□□□□ -1.86
VPS17YOR132W YJR112W-AQ3E743 109 aa3.43□□□□□ -1.86
VPS17YOR132W HXK2P04807 486 aaKnown RBP3.42□□□□□ -1.86
VPS17YOR132W KRS1P15180 591 aaKnown RBP3.42□□□□□ -1.86
VPS17YOR132W PAP1P29468 568 aaKnown RBP3.42□□□□□ -1.86
VPS17YOR132W DAD2P36162 133 aa3.42□□□□□ -1.86
VPS17YOR132W LEU5P38702 357 aa3.42□□□□□ -1.86
VPS17YOR132W TCD1P38756 429 aa3.42□□□□□ -1.86
VPS17YOR132W SLZ1P40167 298 aa3.42□□□□□ -1.86
VPS17YOR132W YIL169CP40442 995 aa3.42□□□□□ -1.86
VPS17YOR132W YFR020WP43600 232 aa3.42□□□□□ -1.86
VPS17YOR132W AIP1P46680 615 aaKnown RBP3.42□□□□□ -1.86
VPS17YOR132W SHE4P51534 789 aa3.42□□□□□ -1.86
VPS17YOR132W YNL181WP53878 407 aa3.42□□□□□ -1.86
VPS17YOR132W RPA49Q01080 415 aaPredicted RBP3.42□□□□□ -1.86
VPS17YOR132W INM2Q05533 292 aa3.42□□□□□ -1.86
VPS17YOR132W GRS2Q06817 618 aa3.42□□□□□ -1.86
VPS17YOR132W LUC7Q07508 261 aaPredicted RBP3.42□□□□□ -1.86
VPS17YOR132W YEH1Q07804 573 aa3.42□□□□□ -1.86
VPS17YOR132W YOR019WQ99248 730 aa3.42□□□□□ -1.86
VPS17YOR132W DFR1P07807 211 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
VPS17YOR132W YML002WP0CF17 737 aa3.41□□□□□ -1.86
VPS17YOR132W DAP2P18962 818 aa3.41□□□□□ -1.86
VPS17YOR132W DBP3P20447 523 aaKnown RBP3.41□□□□□ -1.86
VPS17YOR132W CLB2P24869 491 aa3.41□□□□□ -1.86
VPS17YOR132W PHO84P25297 587 aaKnown RBP3.41□□□□□ -1.86
VPS17YOR132W SSE1P32589 693 aaKnown RBP3.41□□□□□ -1.86
VPS17YOR132W AUR1P36107 401 aaPredicted RBP3.41□□□□□ -1.86
VPS17YOR132W YSW1P38280 609 aa3.41□□□□□ -1.86
VPS17YOR132W SPL2P38839 148 aa3.41□□□□□ -1.86
VPS17YOR132W RTT107P38850 1070 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms