RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C YBL029WP38201 376 aa1.71□□□□□ -2.13
SFB2YNL049C MMS21P38632 267 aa1.71□□□□□ -2.13
SFB2YNL049C GND1P38720 489 aaKnown RBP1.71□□□□□ -2.13
SFB2YNL049C MED6P38782 295 aa1.71□□□□□ -2.13
SFB2YNL049C DJP1P40564 432 aa1.71□□□□□ -2.13
SFB2YNL049C YGL108CP53139 140 aa1.71□□□□□ -2.13
SFB2YNL049C LCL3P53153 274 aa1.71□□□□□ -2.13
SFB2YNL049C SLI1P53304 468 aa1.71□□□□□ -2.13
SFB2YNL049C SXM1Q04175 944 aaKnown RBP1.71□□□□□ -2.13
SFB2YNL049C YML096WQ04489 525 aa1.71□□□□□ -2.13
SFB2YNL049C PRM6Q04705 352 aa1.71□□□□□ -2.13
SFB2YNL049C ARP9Q05123 467 aa1.71□□□□□ -2.13
SFB2YNL049C YLR287CQ05881 355 aa1.71□□□□□ -2.13
SFB2YNL049C CRN1Q06440 651 aa1.71□□□□□ -2.13
SFB2YNL049C TMS1Q12116 473 aa1.71□□□□□ -2.13
SFB2YNL049C NMD4Q12129 218 aa1.71□□□□□ -2.13
SFB2YNL049C YPL150WQ12152 901 aa1.71□□□□□ -2.13
SFB2YNL049C GET3Q12154 354 aaKnown RBP1.71□□□□□ -2.13
SFB2YNL049C FRE7Q12333 620 aa1.71□□□□□ -2.13
SFB2YNL049C SCM3Q12334 223 aa1.71□□□□□ -2.13
SFB2YNL049C ADE4P04046 510 aaKnown RBP1.71□□□□□ -2.14
SFB2YNL049C CHS1P08004 1131 aa1.71□□□□□ -2.14
SFB2YNL049C STE12P13574 688 aa1.71□□□□□ -2.14
SFB2YNL049C CKA1P15790 372 aa1.71□□□□□ -2.14
SFB2YNL049C EST1P17214 699 aaPredicted RBP1.71□□□□□ -2.14
SFB2YNL049C SAT4P25333 603 aaKnown RBP1.71□□□□□ -2.14
SFB2YNL049C ADH7P25377 361 aa1.71□□□□□ -2.14
SFB2YNL049C LAC1P28496 418 aa1.71□□□□□ -2.14
SFB2YNL049C MRPL9P31334 269 aa1.71□□□□□ -2.14
SFB2YNL049C EMP70P32802 667 aa1.71□□□□□ -2.14
SFB2YNL049C TFC3P34111 1160 aa1.71□□□□□ -2.14
SFB2YNL049C PXL1P36166 706 aa1.71□□□□□ -2.14
SFB2YNL049C SOL2P37262 315 aa1.71□□□□□ -2.14
SFB2YNL049C TIM17P39515 158 aa1.71□□□□□ -2.14
SFB2YNL049C FLC2P39719 783 aa1.71□□□□□ -2.14
SFB2YNL049C ORC5P50874 479 aa1.71□□□□□ -2.14
SFB2YNL049C COG2P53271 262 aa1.71□□□□□ -2.14
SFB2YNL049C GND2P53319 492 aa1.71□□□□□ -2.14
SFB2YNL049C CPR8P53728 308 aa1.71□□□□□ -2.14
SFB2YNL049C ARK1P53974 638 aa1.71□□□□□ -2.14
SFB2YNL049C SPC19Q03954 165 aa1.71□□□□□ -2.14
SFB2YNL049C PLM2Q04383 521 aa1.71□□□□□ -2.14
SFB2YNL049C YDR109CQ04585 715 aa1.71□□□□□ -2.14
SFB2YNL049C SWA2Q06677 668 aa1.71□□□□□ -2.14
SFB2YNL049C YPL272CQ08984 517 aa1.71□□□□□ -2.14
SFB2YNL049C VPS68Q12016 184 aa1.71□□□□□ -2.14
SFB2YNL049C GTT2Q12390 233 aa1.71□□□□□ -2.14
SFB2YNL049C NOP58Q12499 511 aaKnown RBP1.71□□□□□ -2.14
SFB2YNL049C NBL1Q3E7Y6 73 aa1.71□□□□□ -2.14
SFB2YNL049C YBR085C-AO43137 85 aa1.7□□□□□ -2.14
SFB2YNL049C RPL7AP05737 244 aaKnown RBP1.7□□□□□ -2.14
SFB2YNL049C CDC36P06100 191 aaPredicted RBP1.7□□□□□ -2.14
SFB2YNL049C YKR104WP0CE69 306 aa1.7□□□□□ -2.14
SFB2YNL049C GRR1P24814 1151 aa1.7□□□□□ -2.14
SFB2YNL049C YJU2P28320 278 aaPredicted RBP1.7□□□□□ -2.14
SFB2YNL049C ERG3P32353 365 aa1.7□□□□□ -2.14
SFB2YNL049C AUR1P36107 401 aaPredicted RBP1.7□□□□□ -2.14
SFB2YNL049C NTR2P36118 322 aaPredicted RBP1.7□□□□□ -2.14
SFB2YNL049C SRO77P38163 1010 aa1.7□□□□□ -2.14
SFB2YNL049C VBA2P38358 474 aaKnown RBP1.7□□□□□ -2.14
SFB2YNL049C STN1P38960 494 aa1.7□□□□□ -2.14
SFB2YNL049C AVT2P39981 480 aa1.7□□□□□ -2.14
SFB2YNL049C SER3P40054 469 aa1.7□□□□□ -2.14
SFB2YNL049C LAS21P40367 830 aa1.7□□□□□ -2.14
SFB2YNL049C RPS10BP46784 105 aaKnown RBP1.7□□□□□ -2.14
SFB2YNL049C MND1P53102 219 aa1.7□□□□□ -2.14
SFB2YNL049C AIM33Q04516 312 aa1.7□□□□□ -2.14
SFB2YNL049C ARG7Q04728 441 aa1.7□□□□□ -2.14
SFB2YNL049C RPS10AQ08745 105 aaPredicted RBP1.7□□□□□ -2.14
SFB2YNL049C MRH1Q12117 320 aaPredicted RBP1.7□□□□□ -2.14
SFB2YNL049C BAG7Q12128 409 aa1.7□□□□□ -2.14
SFB2YNL049C RPL7BQ12213 244 aaKnown RBP1.7□□□□□ -2.14
SFB2YNL049C AHA1Q12449 350 aaKnown RBP1.7□□□□□ -2.14
SFB2YNL049C RPL1AP0CX43 217 aaKnown RBP1.7□□□□□ -2.14
SFB2YNL049C RPL1BP0CX44 217 aaKnown RBP1.7□□□□□ -2.14
SFB2YNL049C RED1P14291 827 aa1.7□□□□□ -2.14
SFB2YNL049C FUR1P18562 216 aaKnown RBP1.7□□□□□ -2.14
SFB2YNL049C PMA2P19657 947 aa1.7□□□□□ -2.14
SFB2YNL049C ISY1P21374 235 aaPredicted RBP1.7□□□□□ -2.14
SFB2YNL049C ROX1P25042 368 aa1.7□□□□□ -2.14
SFB2YNL049C RRT12P25381 491 aa1.7□□□□□ -2.14
SFB2YNL049C MTH1P35198 433 aa1.7□□□□□ -2.14
SFB2YNL049C MNN2P38069 597 aa1.7□□□□□ -2.14
SFB2YNL049C MUP3P38734 546 aa1.7□□□□□ -2.14
SFB2YNL049C GPI16P38875 610 aa1.7□□□□□ -2.14
SFB2YNL049C FAD1P38913 306 aa1.7□□□□□ -2.14
SFB2YNL049C YEL057CP39983 233 aa1.7□□□□□ -2.14
SFB2YNL049C RGI2P40188 164 aa1.7□□□□□ -2.14
SFB2YNL049C SGN1P40561 250 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
SFB2YNL049C VMA13P41807 478 aaKnown RBP1.7□□□□□ -2.14
SFB2YNL049C GLO1P50107 326 aa1.7□□□□□ -2.14
SFB2YNL049C PGA2P53903 129 aa1.7□□□□□ -2.14
SFB2YNL049C INA17Q02888 182 aa1.7□□□□□ -2.14
SFB2YNL049C PPM1Q04081 328 aa1.7□□□□□ -2.14
SFB2YNL049C NKP2Q06162 153 aa1.7□□□□□ -2.14
SFB2YNL049C BSC6Q08280 497 aa1.7□□□□□ -2.14
SFB2YNL049C RCN2Q12044 265 aa1.7□□□□□ -2.14
SFB2YNL049C REX3Q12090 404 aa1.7□□□□□ -2.14
SFB2YNL049C LYS21Q12122 440 aaKnown RBP1.7□□□□□ -2.14
SFB2YNL049C PHO2P07269 559 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms