RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C DOT5P40553 215 aa3.32□□□□□ -1.88
SUB1YMR039C SGN1P40561 250 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
SUB1YMR039C ARF3P40994 183 aaRIP-Chip data3.32□□□□□ -1.88not detected
SUB1YMR039C RRT5P43607 289 aa3.32□□□□□ -1.88
SUB1YMR039C OGG1P53397 376 aaPredicted RBP3.32□□□□□ -1.88
SUB1YMR039C SLG1P54867 378 aa3.32□□□□□ -1.88
SUB1YMR039C TIM10P87108 93 aa3.32□□□□□ -1.88
SUB1YMR039C RPT6Q01939 405 aaKnown RBP3.32□□□□□ -1.88
SUB1YMR039C SXM1Q04175 944 aaKnown RBP3.32□□□□□ -1.88
SUB1YMR039C TAF11Q04226 346 aa3.32□□□□□ -1.88
SUB1YMR039C PBA1Q05778 276 aa3.32□□□□□ -1.88
SUB1YMR039C BSC6Q08280 497 aa3.32□□□□□ -1.88
SUB1YMR039C ESA1Q08649 445 aa3.32□□□□□ -1.88
SUB1YMR039C SFI1Q12369 946 aa3.32□□□□□ -1.88
SUB1YMR039C SNU66Q12420 587 aaPredicted RBP3.32□□□□□ -1.88
SUB1YMR039C RAV1P47104 1357 aa3.32□□□□□ -1.88
SUB1YMR039C CHS1P08004 1131 aa3.31□□□□□ -1.88
SUB1YMR039C ARO2P28777 376 aaKnown RBP3.31□□□□□ -1.88
SUB1YMR039C WBP1P33767 430 aaKnown RBP3.31□□□□□ -1.88
SUB1YMR039C PXA2P34230 853 aa3.31□□□□□ -1.88
SUB1YMR039C FRE2P36033 711 aa3.31□□□□□ -1.88
SUB1YMR039C RSM22P36056 628 aa3.31□□□□□ -1.88
SUB1YMR039C YIL067CP40514 678 aa3.31□□□□□ -1.88
SUB1YMR039C AVT4P50944 713 aa3.31□□□□□ -1.88
SUB1YMR039C SDT1P53078 280 aa3.31□□□□□ -1.88
SUB1YMR039C ART5P53244 586 aaKnown RBP3.31□□□□□ -1.88
SUB1YMR039C TMS1Q12116 473 aa3.31□□□□□ -1.88
SUB1YMR039C HSP82P02829 709 aaKnown RBP3.3□□□□□ -1.88
SUB1YMR039C DFR1P07807 211 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SUB1YMR039C GLC7P32598 312 aaKnown RBP3.3□□□□□ -1.88
SUB1YMR039C YBR225WP38321 900 aa3.3□□□□□ -1.88
SUB1YMR039C YFL067WP43537 175 aa3.3□□□□□ -1.88
SUB1YMR039C IBD2P53892 351 aa3.3□□□□□ -1.88
SUB1YMR039C YDR239CQ03780 787 aa3.3□□□□□ -1.88
SUB1YMR039C SYF1Q04048 859 aaPredicted RBP3.3□□□□□ -1.88
SUB1YMR039C MFB1Q04922 465 aa3.3□□□□□ -1.88
SUB1YMR039C RED1P14291 827 aa3.29□□□□□ -1.88
SUB1YMR039C ISY1P21374 235 aaPredicted RBP3.29□□□□□ -1.88
SUB1YMR039C OCA4P25366 362 aa3.29□□□□□ -1.88
SUB1YMR039C HXT1P32465 570 aa3.29□□□□□ -1.88
SUB1YMR039C SWI3P32591 825 aa3.29□□□□□ -1.88
SUB1YMR039C MRE11P32829 692 aa3.29□□□□□ -1.88
SUB1YMR039C REE1P40893 198 aa3.29□□□□□ -1.88
SUB1YMR039C CAF130P53280 1122 aaPredicted RBP3.29□□□□□ -1.88
SUB1YMR039C ARE2P53629 642 aaKnown RBP3.29□□□□□ -1.88
SUB1YMR039C VPS75P53853 264 aa3.29□□□□□ -1.88
SUB1YMR039C RCF1Q03713 159 aa3.29□□□□□ -1.88
SUB1YMR039C THP3Q12049 470 aaKnown RBP3.29□□□□□ -1.88
SUB1YMR039C RRG1Q12167 365 aaPredicted RBP3.29□□□□□ -1.88
SUB1YMR039C CKA1P15790 372 aa3.28□□□□□ -1.88
SUB1YMR039C OPI1P21957 404 aa3.28□□□□□ -1.88
SUB1YMR039C SPR1P32603 445 aa3.28□□□□□ -1.88
SUB1YMR039C VMA8P32610 256 aaKnown RBP3.28□□□□□ -1.88
SUB1YMR039C NAT2P37293 288 aa3.28□□□□□ -1.88
SUB1YMR039C SRO77P38163 1010 aa3.28□□□□□ -1.88
SUB1YMR039C CST26P38226 397 aa3.28□□□□□ -1.88
SUB1YMR039C PTH1P38876 190 aaKnown RBP3.28□□□□□ -1.88
SUB1YMR039C SYG1P40528 902 aa3.28□□□□□ -1.88
SUB1YMR039C POP1P41812 875 aa3.28□□□□□ -1.88
SUB1YMR039C GPD2P41911 440 aaKnown RBP3.28□□□□□ -1.88
SUB1YMR039C RSC1P53236 928 aa3.28□□□□□ -1.88
SUB1YMR039C MHR1Q06630 226 aa3.28□□□□□ -1.88
SUB1YMR039C YDL007C-AQ2V2Q0 85 aa3.28□□□□□ -1.88
SUB1YMR039C RPL31BP0C2H9 113 aaKnown RBP3.27□□□□□ -1.89
SUB1YMR039C CPR4P25334 318 aa3.27□□□□□ -1.89
SUB1YMR039C CDC60P26637 1090 aaKnown RBP3.27□□□□□ -1.89
SUB1YMR039C SDH3P33421 198 aa3.27□□□□□ -1.89
SUB1YMR039C SRP72P38688 640 aaKnown RBP3.27□□□□□ -1.89
SUB1YMR039C YMR147WP40218 223 aaKnown RBP3.27□□□□□ -1.89
SUB1YMR039C PET130P47065 347 aa3.27□□□□□ -1.89
SUB1YMR039C YML6P51998 286 aa3.27□□□□□ -1.89
SUB1YMR039C YGL039WP53183 348 aaKnown RBP3.27□□□□□ -1.89
SUB1YMR039C POP6P53218 158 aa3.27□□□□□ -1.89
SUB1YMR039C ODC1Q03028 310 aa3.27□□□□□ -1.89
SUB1YMR039C RRG7Q08774 242 aaPredicted RBP3.27□□□□□ -1.89
SUB1YMR039C ARG3P05150 338 aa3.26□□□□□ -1.89
SUB1YMR039C LEU4P06208 619 aaKnown RBP3.26□□□□□ -1.89
SUB1YMR039C HOM3P10869 527 aa3.26□□□□□ -1.89
SUB1YMR039C PDX1P16451 410 aa3.26□□□□□ -1.89
SUB1YMR039C RPC53P25441 422 aa3.26□□□□□ -1.89
SUB1YMR039C DBF4P32325 704 aa3.26□□□□□ -1.89
SUB1YMR039C ERG3P32353 365 aa3.26□□□□□ -1.89
SUB1YMR039C BYE1P36106 594 aa3.26□□□□□ -1.89
SUB1YMR039C KEL1P38853 1164 aaKnown RBP3.26□□□□□ -1.89
SUB1YMR039C ISC1P40015 477 aaKnown RBP3.26□□□□□ -1.89
SUB1YMR039C MRPL35Q06678 367 aa3.26□□□□□ -1.89
SUB1YMR039C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SUB1YMR039C YLR108CQ12259 485 aa3.26□□□□□ -1.89
SUB1YMR039C HRT3Q12347 344 aa3.26□□□□□ -1.89
SUB1YMR039C SEC39Q12745 709 aa3.26□□□□□ -1.89
SUB1YMR039C PGA3Q12746 312 aaKnown RBP3.26□□□□□ -1.89
SUB1YMR039C ROX1P25042 368 aa3.25□□□□□ -1.89
SUB1YMR039C YCR100CP25606 316 aa3.25□□□□□ -1.89
SUB1YMR039C TOA1P32773 286 aa3.25□□□□□ -1.89
SUB1YMR039C CBP4P37267 147 aa3.25□□□□□ -1.89
SUB1YMR039C SWD3P38123 315 aa3.25□□□□□ -1.89
SUB1YMR039C MIX23P38162 196 aa3.25□□□□□ -1.89
SUB1YMR039C MTC6P38849 526 aa3.25□□□□□ -1.89
SUB1YMR039C MET28P40573 187 aa3.25□□□□□ -1.89
SUB1YMR039C OCA1P50946 238 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms