RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeast

Gene ATG38, Length 681 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG38	YLR211C	YDL007C-A	Q2V2Q0	85 aa		3.01	□□□□□ -1.93
ATG38	YLR211C	RPL31B	P0C2H9	113 aa	Known RBP	3	□□□□□ -1.93
ATG38	YLR211C	YCR100C	P25606	316 aa		3	□□□□□ -1.93
ATG38	YLR211C	ARO2	P28777	376 aa	Known RBP	3	□□□□□ -1.93
ATG38	YLR211C	RSM22	P36056	628 aa		3	□□□□□ -1.93
ATG38	YLR211C	MIX23	P38162	196 aa		3	□□□□□ -1.93
ATG38	YLR211C	REG2	P38232	338 aa		3	□□□□□ -1.93
ATG38	YLR211C	YEL057C	P39983	233 aa		3	□□□□□ -1.93
ATG38	YLR211C	POP1	P41812	875 aa		3	□□□□□ -1.93
ATG38	YLR211C	YGR066C	P53242	292 aa		3	□□□□□ -1.93
ATG38	YLR211C	OGG1	P53397	376 aa	Predicted RBP	3	□□□□□ -1.93
ATG38	YLR211C	VPS75	P53853	264 aa		3	□□□□□ -1.93
ATG38	YLR211C	ODC1	Q03028	310 aa		3	□□□□□ -1.93
ATG38	YLR211C	TAP42	Q04372	366 aa		3	□□□□□ -1.93
ATG38	YLR211C	PIM1	P36775	1133 aa		2.99	□□□□□ -1.93
ATG38	YLR211C	MET28	P40573	187 aa		2.99	□□□□□ -1.93
ATG38	YLR211C	OST1	P41543	476 aa	Known RBP	2.99	□□□□□ -1.93
ATG38	YLR211C	ARE2	P53629	642 aa	Known RBP	2.99	□□□□□ -1.93
ATG38	YLR211C	BRR1	Q99177	341 aa	Predicted RBP	2.99	□□□□□ -1.93
ATG38	YLR211C	SAM1	P10659	382 aa	Known RBP	2.98	□□□□□ -1.93
ATG38	YLR211C	SAM2	P19358	384 aa	Known RBP	2.98	□□□□□ -1.93
ATG38	YLR211C	DPB3	P27344	201 aa		2.98	□□□□□ -1.93
ATG38	YLR211C	OCA1	P50946	238 aa	Predicted RBP	2.98	□□□□□ -1.93
ATG38	YLR211C	YGL108C	P53139	140 aa		2.98	□□□□□ -1.93
ATG38	YLR211C	YGL039W	P53183	348 aa	Known RBP	2.98	□□□□□ -1.93
ATG38	YLR211C	IBD2	P53892	351 aa		2.98	□□□□□ -1.93
ATG38	YLR211C	ENT1	Q12518	454 aa		2.98	□□□□□ -1.93
ATG38	YLR211C	SUP35	P05453	685 aa	Known RBP	2.97	□□□□□ -1.93
ATG38	YLR211C	LEU4	P06208	619 aa	Known RBP	2.97	□□□□□ -1.93
ATG38	YLR211C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
ATG38	YLR211C	PEP3	P27801	918 aa		2.97	□□□□□ -1.93
ATG38	YLR211C	NOP4	P37838	685 aa	Known RBP	2.97	□□□□□ -1.93
ATG38	YLR211C	THI2	P38141	450 aa		2.97	□□□□□ -1.93
ATG38	YLR211C	DOT5	P40553	215 aa		2.97	□□□□□ -1.93
ATG38	YLR211C	URB2	P47108	1174 aa		2.97	□□□□□ -1.93
ATG38	YLR211C	PDS5	Q04264	1277 aa		2.97	□□□□□ -1.93
ATG38	YLR211C	YPL199C	Q08954	240 aa		2.97	□□□□□ -1.93
ATG38	YLR211C	YLR108C	Q12259	485 aa		2.97	□□□□□ -1.93
ATG38	YLR211C	RPS8A	P0CX39	200 aa	Known RBP	2.96	□□□□□ -1.94
ATG38	YLR211C	RPS8B	P0CX40	200 aa	Known RBP	2.96	□□□□□ -1.94
ATG38	YLR211C	MET8	P15807	274 aa		2.96	□□□□□ -1.94
ATG38	YLR211C	ITR1	P30605	584 aa		2.96	□□□□□ -1.94
ATG38	YLR211C	CRM1	P30822	1084 aa	Known RBP	2.96	□□□□□ -1.94
ATG38	YLR211C	SDH3	P33421	198 aa		2.96	□□□□□ -1.94
ATG38	YLR211C	YCR041W	P37265	110 aa		2.96	□□□□□ -1.94
ATG38	YLR211C	VMA13	P41807	478 aa	Known RBP	2.96	□□□□□ -1.94
ATG38	YLR211C	HXT11	P54862	567 aa		2.96	□□□□□ -1.94
ATG38	YLR211C	SEC39	Q12745	709 aa		2.96	□□□□□ -1.94
ATG38	YLR211C	FOB1	O13329	566 aa		2.95	□□□□□ -1.94
ATG38	YLR211C	ATP10	P18496	279 aa		2.95	□□□□□ -1.94
ATG38	YLR211C	STB6	P36085	766 aa		2.95	□□□□□ -1.94
ATG38	YLR211C	YBR137W	P38276	179 aa		2.95	□□□□□ -1.94
ATG38	YLR211C	YBR225W	P38321	900 aa		2.95	□□□□□ -1.94
ATG38	YLR211C	PRM5	P40476	318 aa		2.95	□□□□□ -1.94
ATG38	YLR211C	WWM1	P43582	211 aa	Known RBP	2.95	□□□□□ -1.94
ATG38	YLR211C	PNG1	Q02890	363 aa		2.95	□□□□□ -1.94
ATG38	YLR211C	HRI1	Q05905	244 aa	Known RBP	2.95	□□□□□ -1.94
ATG38	YLR211C	YAR066W	P0CX18	203 aa		2.94	□□□□□ -1.94
ATG38	YLR211C	YHR214W	P0CX19	203 aa		2.94	□□□□□ -1.94
ATG38	YLR211C	PRS1	P32895	427 aa	Known RBP	2.94	□□□□□ -1.94
ATG38	YLR211C	CST26	P38226	397 aa		2.94	□□□□□ -1.94
ATG38	YLR211C	MSG5	P38590	489 aa		2.94	□□□□□ -1.94
ATG38	YLR211C	MST28	P39552	234 aa		2.94	□□□□□ -1.94
ATG38	YLR211C	PAN6	P40459	309 aa		2.94	□□□□□ -1.94
ATG38	YLR211C	MRP51	Q02950	344 aa		2.94	□□□□□ -1.94
ATG38	YLR211C	YDR239C	Q03780	787 aa		2.94	□□□□□ -1.94
ATG38	YLR211C	SOV1	Q04748	898 aa		2.94	□□□□□ -1.94
ATG38	YLR211C	MRD1	Q06106	887 aa	Known RBP	2.94	□□□□□ -1.94
ATG38	YLR211C	RAD61	Q99359	647 aa		2.94	□□□□□ -1.94
ATG38	YLR211C	NAT1	P12945	854 aa	Known RBP	2.93	□□□□□ -1.94
ATG38	YLR211C	PET123	P17558	318 aa		2.93	□□□□□ -1.94
ATG38	YLR211C	RVS161	P25343	265 aa	Known RBP	2.93	□□□□□ -1.94
ATG38	YLR211C	CCT2	P39076	527 aa	Known RBP	2.93	□□□□□ -1.94
ATG38	YLR211C	NCA3	P46955	337 aa		2.93	□□□□□ -1.94
ATG38	YLR211C	PCP1	P53259	346 aa		2.93	□□□□□ -1.94
ATG38	YLR211C	MTM1	P53320	366 aa		2.93	□□□□□ -1.94
ATG38	YLR211C	TSA2	Q04120	196 aa		2.93	□□□□□ -1.94
ATG38	YLR211C	IMH1	Q06704	911 aa	Known RBP	2.93	□□□□□ -1.94
ATG38	YLR211C	RIB5	P38145	238 aa		2.92	□□□□□ -1.94
ATG38	YLR211C	YIP1	P53039	248 aa		2.92	□□□□□ -1.94
ATG38	YLR211C	TWF1	P53250	332 aa		2.92	□□□□□ -1.94
ATG38	YLR211C	FDH1	Q08911	376 aa		2.92	□□□□□ -1.94
ATG38	YLR211C	YPR022C	Q12139	1133 aa		2.92	□□□□□ -1.94
ATG38	YLR211C	GCN4	P03069	281 aa		2.91	□□□□□ -1.94
ATG38	YLR211C	SPB1	P25582	841 aa	Predicted RBP	2.91	□□□□□ -1.94
ATG38	YLR211C	TIP1	P27654	210 aa	Predicted RBP	2.91	□□□□□ -1.94
ATG38	YLR211C	SEC66	P33754	206 aa		2.91	□□□□□ -1.94
ATG38	YLR211C	PMT1	P33775	817 aa		2.91	□□□□□ -1.94
ATG38	YLR211C	TMA108	P40462	946 aa		2.91	□□□□□ -1.94
ATG38	YLR211C	SPO22	P40511	975 aa		2.91	□□□□□ -1.94
ATG38	YLR211C	TFG2	P41896	400 aa	Predicted RBP	2.91	□□□□□ -1.94
ATG38	YLR211C	YDL012C	Q12489	107 aa		2.91	□□□□□ -1.94
ATG38	YLR211C	NFT1	P0CE68	1218 aa		2.9	□□□□□ -1.95
ATG38	YLR211C	SPS22	P25380	463 aa		2.9	□□□□□ -1.95
ATG38	YLR211C	SSU1	P41930	458 aa		2.9	□□□□□ -1.95
ATG38	YLR211C	LAM5	P43560	674 aa		2.9	□□□□□ -1.95
ATG38	YLR211C	YGR149W	P48236	432 aa		2.9	□□□□□ -1.95
ATG38	YLR211C	SHY1	P53266	389 aa		2.9	□□□□□ -1.95
ATG38	YLR211C	TIM10	P87108	93 aa		2.9	□□□□□ -1.95
ATG38	YLR211C	WTM1	Q12363	437 aa	Known RBP	2.9	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms