RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C SPT15P13393 240 aaKnown RBP3.58□□□□□ -1.84
SMD3YLR147C YCR100CP25606 316 aa3.58□□□□□ -1.84
SMD3YLR147C GPI10P30777 616 aa3.58□□□□□ -1.84
SMD3YLR147C YIL067CP40514 678 aa3.58□□□□□ -1.84
SMD3YLR147C GRX6Q12438 231 aa3.58□□□□□ -1.84
SMD3YLR147C SPB1P25582 841 aaPredicted RBP3.57□□□□□ -1.84
SMD3YLR147C NAM9P27929 486 aa3.57□□□□□ -1.84
SMD3YLR147C RAD14P28519 371 aa3.57□□□□□ -1.84
SMD3YLR147C YIM1P28625 365 aa3.57□□□□□ -1.84
SMD3YLR147C HXT14P42833 540 aa3.57□□□□□ -1.84
SMD3YLR147C YGR149WP48236 432 aa3.57□□□□□ -1.84
SMD3YLR147C POP6P53218 158 aa3.57□□□□□ -1.84
SMD3YLR147C ODC1Q03028 310 aa3.57□□□□□ -1.84
SMD3YLR147C SOV1Q04748 898 aa3.57□□□□□ -1.84
SMD3YLR147C RQC1Q05468 723 aaKnown RBP3.57□□□□□ -1.84
SMD3YLR147C RIM20Q12033 661 aa3.57□□□□□ -1.84
SMD3YLR147C RRP12Q12754 1228 aaKnown RBP3.57□□□□□ -1.84
SMD3YLR147C MET17P06106 444 aa3.56□□□□□ -1.84
SMD3YLR147C RHO2P06781 192 aa3.56□□□□□ -1.84
SMD3YLR147C NOP1P15646 327 aaKnown RBP3.56□□□□□ -1.84
SMD3YLR147C CRM1P30822 1084 aaKnown RBP3.56□□□□□ -1.84
SMD3YLR147C AFG1P32317 509 aa3.56□□□□□ -1.84
SMD3YLR147C ARF3P40994 183 aaRIP-Chip data3.56□□□□□ -1.84not detected
SMD3YLR147C TFG2P41896 400 aaPredicted RBP3.56□□□□□ -1.84
SMD3YLR147C IRC6P43615 237 aa3.56□□□□□ -1.84
SMD3YLR147C PNG1Q02890 363 aa3.56□□□□□ -1.84
SMD3YLR147C ELP3Q02908 557 aaKnown RBP3.56□□□□□ -1.84
SMD3YLR147C TMS1Q12116 473 aa3.56□□□□□ -1.84
SMD3YLR147C TOP1P04786 769 aa3.55□□□□□ -1.84
SMD3YLR147C MRP7P12687 371 aa3.55□□□□□ -1.84
SMD3YLR147C LDB16P25587 256 aa3.55□□□□□ -1.84
SMD3YLR147C NAT2P37293 288 aa3.55□□□□□ -1.84
SMD3YLR147C SMF1P38925 575 aa3.55□□□□□ -1.84
SMD3YLR147C ESL1P40456 1118 aa3.55□□□□□ -1.84
SMD3YLR147C SHE10P53075 577 aa3.55□□□□□ -1.84
SMD3YLR147C RRN11Q04712 507 aa3.55□□□□□ -1.84
SMD3YLR147C PBA1Q05778 276 aa3.55□□□□□ -1.84
SMD3YLR147C ESA1Q08649 445 aa3.55□□□□□ -1.84
SMD3YLR147C YML133CQ03099 1374 aa3.54□□□□□ -1.84
SMD3YLR147C YLL067CQ07888 1374 aa3.54□□□□□ -1.84
SMD3YLR147C YLL066CQ99208 1374 aa3.54□□□□□ -1.84
SMD3YLR147C YAR066WP0CX18 203 aa3.54□□□□□ -1.84
SMD3YLR147C YHR214WP0CX19 203 aa3.54□□□□□ -1.84
SMD3YLR147C CKA1P15790 372 aa3.54□□□□□ -1.84
SMD3YLR147C CPR4P25334 318 aa3.54□□□□□ -1.84
SMD3YLR147C DEG1P31115 442 aaKnown RBP3.54□□□□□ -1.84
SMD3YLR147C GYP6P32806 458 aa3.54□□□□□ -1.84
SMD3YLR147C YBL059WP34224 193 aa3.54□□□□□ -1.84
SMD3YLR147C YCR041WP37265 110 aa3.54□□□□□ -1.84
SMD3YLR147C CBP4P37267 147 aa3.54□□□□□ -1.84
SMD3YLR147C MIX23P38162 196 aa3.54□□□□□ -1.84
SMD3YLR147C NDT80P38830 627 aa3.54□□□□□ -1.84
SMD3YLR147C UTP9P38882 575 aaKnown RBP3.54□□□□□ -1.84
SMD3YLR147C CCT2P39076 527 aaKnown RBP3.54□□□□□ -1.84
SMD3YLR147C RMD9P53140 646 aaKnown RBP3.54□□□□□ -1.84
SMD3YLR147C GOR1P53839 350 aa3.54□□□□□ -1.84
SMD3YLR147C YPL199CQ08954 240 aa3.54□□□□□ -1.84
SMD3YLR147C SAM1P10659 382 aaKnown RBP3.53□□□□□ -1.84
SMD3YLR147C SAM2P19358 384 aaKnown RBP3.53□□□□□ -1.84
SMD3YLR147C ROX1P25042 368 aa3.53□□□□□ -1.84
SMD3YLR147C IDH2P28241 369 aaKnown RBP3.53□□□□□ -1.84
SMD3YLR147C PRP21P32524 280 aaPredicted RBP3.53□□□□□ -1.84
SMD3YLR147C MRPL4P36517 319 aa3.53□□□□□ -1.84
SMD3YLR147C YFL067WP43537 175 aa3.53□□□□□ -1.84
SMD3YLR147C BTN2P53286 410 aa3.53□□□□□ -1.84
SMD3YLR147C IBD2P53892 351 aa3.53□□□□□ -1.84
SMD3YLR147C NCS2P53923 493 aaPredicted RBP3.53□□□□□ -1.84
SMD3YLR147C MRPL35Q06678 367 aa3.53□□□□□ -1.84
SMD3YLR147C HHF1P02309 103 aaKnown RBP3.52□□□□□ -1.85
SMD3YLR147C HXT3P32466 567 aaKnown RBP3.52□□□□□ -1.85
SMD3YLR147C NIP100P33420 868 aa3.52□□□□□ -1.85
SMD3YLR147C PAD1P33751 242 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
SMD3YLR147C NDE1P40215 560 aa3.52□□□□□ -1.85
SMD3YLR147C PRE5P40302 234 aaKnown RBP3.52□□□□□ -1.85
SMD3YLR147C REE1P40893 198 aa3.52□□□□□ -1.85
SMD3YLR147C OST1P41543 476 aaKnown RBP3.52□□□□□ -1.85
SMD3YLR147C YGR210CP42942 411 aa3.52□□□□□ -1.85
SMD3YLR147C YIP1P53039 248 aa3.52□□□□□ -1.85
SMD3YLR147C PCP1P53259 346 aa3.52□□□□□ -1.85
SMD3YLR147C MRPL19P53875 158 aa3.52□□□□□ -1.85
SMD3YLR147C HEL2Q05580 639 aaKnown RBP3.52□□□□□ -1.85
SMD3YLR147C SPS4P09937 338 aa3.51□□□□□ -1.85
SMD3YLR147C PPH22P23595 377 aa3.51□□□□□ -1.85
SMD3YLR147C ITR1P30605 584 aa3.51□□□□□ -1.85
SMD3YLR147C YEL045CP32616 141 aa3.51□□□□□ -1.85
SMD3YLR147C MST28P39552 234 aa3.51□□□□□ -1.85
SMD3YLR147C TOF1P53840 1238 aa3.51□□□□□ -1.85
SMD3YLR147C MRP51Q02950 344 aa3.51□□□□□ -1.85
SMD3YLR147C ADD37Q03233 198 aa3.51□□□□□ -1.85
SMD3YLR147C YLR108CQ12259 485 aa3.51□□□□□ -1.85
SMD3YLR147C SEC63P14906 663 aa3.5□□□□□ -1.85
SMD3YLR147C ECM25P32525 599 aa3.5□□□□□ -1.85
SMD3YLR147C SWD3P38123 315 aa3.5□□□□□ -1.85
SMD3YLR147C YDR387CQ04162 555 aa3.5□□□□□ -1.85
SMD3YLR147C HSP31Q04432 237 aa3.5□□□□□ -1.85
SMD3YLR147C TSR1Q07381 788 aaKnown RBP3.5□□□□□ -1.85
SMD3YLR147C YOL159C-AQ3E769 90 aa3.5□□□□□ -1.85
SMD3YLR147C YLR278CQ05854 1341 aa3.49□□□□□ -1.85
SMD3YLR147C GPH1P06738 902 aaKnown RBP3.49□□□□□ -1.85
SMD3YLR147C RIP1P08067 215 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms