RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C TUL1P36096 758 aa2.43□□□□□ -2.02
CMS1YLR003C DUG2P38149 878 aa2.43□□□□□ -2.02
CMS1YLR003C OTU2P38747 307 aaKnown RBP2.43□□□□□ -2.02
CMS1YLR003C MET18P40469 1032 aa2.43□□□□□ -2.02
CMS1YLR003C IRC15Q02733 499 aa2.43□□□□□ -2.02
CMS1YLR003C YLR287CQ05881 355 aa2.43□□□□□ -2.02
CMS1YLR003C CFT2Q12102 859 aaPredicted RBP2.43□□□□□ -2.02
CMS1YLR003C RRG1Q12167 365 aaPredicted RBP2.43□□□□□ -2.02
CMS1YLR003C YDL009CQ12210 107 aa2.43□□□□□ -2.02
CMS1YLR003C BRR1Q99177 341 aaPredicted RBP2.43□□□□□ -2.02
CMS1YLR003C ATR1P13090 542 aa2.42□□□□□ -2.02
CMS1YLR003C PRP2P20095 876 aaPredicted RBP2.42□□□□□ -2.02
CMS1YLR003C CLB3P24870 427 aa2.42□□□□□ -2.02
CMS1YLR003C YCR007CP25354 239 aa2.42□□□□□ -2.02
CMS1YLR003C UTR4P32626 227 aa2.42□□□□□ -2.02
CMS1YLR003C SAS3P34218 831 aa2.42□□□□□ -2.02
CMS1YLR003C MUM2P38236 366 aa2.42□□□□□ -2.02
CMS1YLR003C SMF1P38925 575 aa2.42□□□□□ -2.02
CMS1YLR003C SHO1P40073 367 aa2.42□□□□□ -2.02
CMS1YLR003C YGR149WP48236 432 aa2.42□□□□□ -2.02
CMS1YLR003C SYO1Q07395 620 aa2.42□□□□□ -2.02
CMS1YLR003C HNT3Q08702 217 aa2.42□□□□□ -2.02
CMS1YLR003C YOR387CQ08910 206 aa2.42□□□□□ -2.02
CMS1YLR003C RTP1Q12751 981 aa2.42□□□□□ -2.02
CMS1YLR003C YER078W-AQ3E7A2 54 aa2.42□□□□□ -2.02
CMS1YLR003C YRF1-4O13559 1382 aa2.41□□□□□ -2.02
CMS1YLR003C AMD1P15274 810 aaKnown RBP2.41□□□□□ -2.02
CMS1YLR003C SRV2P17555 526 aaKnown RBP2.41□□□□□ -2.02
CMS1YLR003C SPB1P25582 841 aaPredicted RBP2.41□□□□□ -2.02
CMS1YLR003C RAD14P28519 371 aa2.41□□□□□ -2.02
CMS1YLR003C ATP11P32453 318 aa2.41□□□□□ -2.02
CMS1YLR003C KEL1P38853 1164 aaKnown RBP2.41□□□□□ -2.02
CMS1YLR003C NOC2P39744 710 aaKnown RBP2.41□□□□□ -2.02
CMS1YLR003C VTC2P43585 828 aa2.41□□□□□ -2.02
CMS1YLR003C YGL108CP53139 140 aa2.41□□□□□ -2.02
CMS1YLR003C MSO1P53604 210 aaKnown RBP2.41□□□□□ -2.02
CMS1YLR003C TAF11Q04226 346 aa2.41□□□□□ -2.02
CMS1YLR003C RBS1Q05672 457 aaKnown RBP2.41□□□□□ -2.02
CMS1YLR003C VPS74Q06385 345 aa2.41□□□□□ -2.02
CMS1YLR003C RKM5Q12367 367 aa2.41□□□□□ -2.02
CMS1YLR003C LEU4P06208 619 aaKnown RBP2.4□□□□□ -2.03
CMS1YLR003C SPT15P13393 240 aaKnown RBP2.4□□□□□ -2.03
CMS1YLR003C GLK1P17709 500 aaKnown RBP2.4□□□□□ -2.03
CMS1YLR003C ISY1P21374 235 aaPredicted RBP2.4□□□□□ -2.03
CMS1YLR003C NAM9P27929 486 aa2.4□□□□□ -2.03
CMS1YLR003C FRE2P36033 711 aa2.4□□□□□ -2.03
CMS1YLR003C ISC1P40015 477 aaKnown RBP2.4□□□□□ -2.03
CMS1YLR003C ALG8P40351 577 aa2.4□□□□□ -2.03
CMS1YLR003C SYG1P40528 902 aa2.4□□□□□ -2.03
CMS1YLR003C SRB7P47822 140 aa2.4□□□□□ -2.03
CMS1YLR003C RMD9P53140 646 aaKnown RBP2.4□□□□□ -2.03
CMS1YLR003C JJJ1P53863 590 aa2.4□□□□□ -2.03
CMS1YLR003C YMR155WQ03795 547 aa2.4□□□□□ -2.03
CMS1YLR003C SIL1Q08199 421 aa2.4□□□□□ -2.03
CMS1YLR003C SUC2P00724 532 aa2.39□□□□□ -2.03
CMS1YLR003C SPS4P09937 338 aa2.39□□□□□ -2.03
CMS1YLR003C REC107P21651 314 aa2.39□□□□□ -2.03
CMS1YLR003C RNA14P25298 677 aaKnown RBP2.39□□□□□ -2.03
CMS1YLR003C FUN19P28003 413 aaPredicted RBP2.39□□□□□ -2.03
CMS1YLR003C YIM1P28625 365 aa2.39□□□□□ -2.03
CMS1YLR003C DEG1P31115 442 aaKnown RBP2.39□□□□□ -2.03
CMS1YLR003C REC114P32841 428 aa2.39□□□□□ -2.03
CMS1YLR003C BYE1P36106 594 aa2.39□□□□□ -2.03
CMS1YLR003C SSU1P41930 458 aa2.39□□□□□ -2.03
CMS1YLR003C GWT1P47026 490 aa2.39□□□□□ -2.03
CMS1YLR003C SPC19Q03954 165 aa2.39□□□□□ -2.03
CMS1YLR003C RQC1Q05468 723 aaKnown RBP2.39□□□□□ -2.03
CMS1YLR003C GRX6Q12438 231 aa2.39□□□□□ -2.03
CMS1YLR003C YOL159C-AQ3E769 90 aa2.39□□□□□ -2.03
CMS1YLR003C YLR278CQ05854 1341 aa2.39□□□□□ -2.03
CMS1YLR003C RHO2P06781 192 aa2.38□□□□□ -2.03
CMS1YLR003C YAR066WP0CX18 203 aa2.38□□□□□ -2.03
CMS1YLR003C YHR214WP0CX19 203 aa2.38□□□□□ -2.03
CMS1YLR003C ATP10P18496 279 aa2.38□□□□□ -2.03
CMS1YLR003C PUT3P25502 979 aaPredicted RBP2.38□□□□□ -2.03
CMS1YLR003C HXT3P32466 567 aaKnown RBP2.38□□□□□ -2.03
CMS1YLR003C HCS1P34243 683 aa2.38□□□□□ -2.03
CMS1YLR003C ARA1P38115 344 aa2.38□□□□□ -2.03
CMS1YLR003C THI2P38141 450 aa2.38□□□□□ -2.03
CMS1YLR003C YGR210CP42942 411 aa2.38□□□□□ -2.03
CMS1YLR003C URB2P47108 1174 aa2.38□□□□□ -2.03
CMS1YLR003C DSL1P53847 754 aa2.38□□□□□ -2.03
CMS1YLR003C KTR5P53966 522 aaPredicted RBP2.38□□□□□ -2.03
CMS1YLR003C PIR3Q03180 325 aa2.38□□□□□ -2.03
CMS1YLR003C BNA5Q05979 453 aa2.38□□□□□ -2.03
CMS1YLR003C VTA1Q06263 330 aa2.38□□□□□ -2.03
CMS1YLR003C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
CMS1YLR003C CPR1P14832 162 aaKnown RBP2.37□□□□□ -2.03
CMS1YLR003C RPI1P23250 407 aaKnown RBP2.37□□□□□ -2.03
CMS1YLR003C BUB3P26449 341 aa2.37□□□□□ -2.03
CMS1YLR003C ERG3P32353 365 aa2.37□□□□□ -2.03
CMS1YLR003C APE2P32454 952 aaKnown RBP2.37□□□□□ -2.03
CMS1YLR003C SEC66P33754 206 aa2.37□□□□□ -2.03
CMS1YLR003C SWD3P38123 315 aa2.37□□□□□ -2.03
CMS1YLR003C VHC1P38329 1120 aa2.37□□□□□ -2.03
CMS1YLR003C FAU1P40099 211 aa2.37□□□□□ -2.03
CMS1YLR003C YFL067WP43537 175 aa2.37□□□□□ -2.03
CMS1YLR003C DLD2P46681 530 aaKnown RBP2.37□□□□□ -2.03
CMS1YLR003C PCP1P53259 346 aa2.37□□□□□ -2.03
CMS1YLR003C YIF1P53845 314 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 82.5 ms