RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C TRP1P00912 224 aa1.68□□□□□ -2.14
RPL40BYKR094C MRP13P12686 339 aa1.68□□□□□ -2.14
RPL40BYKR094C ELO2P25358 347 aa1.68□□□□□ -2.14
RPL40BYKR094C YCR100CP25606 316 aa1.68□□□□□ -2.14
RPL40BYKR094C CHK1P38147 527 aa1.68□□□□□ -2.14
RPL40BYKR094C YBR225WP38321 900 aa1.68□□□□□ -2.14
RPL40BYKR094C YER010CP40011 234 aa1.68□□□□□ -2.14
RPL40BYKR094C ISC1P40015 477 aaKnown RBP1.68□□□□□ -2.14
RPL40BYKR094C CHS6P40955 746 aa1.68□□□□□ -2.14
RPL40BYKR094C CWC25P53854 179 aaKnown RBP1.68□□□□□ -2.14
RPL40BYKR094C HEF3P53978 1044 aaKnown RBP1.68□□□□□ -2.14
RPL40BYKR094C TOF2Q02208 771 aa1.68□□□□□ -2.14
RPL40BYKR094C ODC1Q03028 310 aa1.68□□□□□ -2.14
RPL40BYKR094C VHS1Q03785 461 aa1.68□□□□□ -2.14
RPL40BYKR094C RAD30Q04049 632 aa1.68□□□□□ -2.14
RPL40BYKR094C BUD22Q04347 519 aaKnown RBP1.68□□□□□ -2.14
RPL40BYKR094C YPQ1Q12010 308 aa1.68□□□□□ -2.14
RPL40BYKR094C SKM1Q12469 655 aa1.68□□□□□ -2.14
RPL40BYKR094C ART10P18634 518 aaKnown RBP1.67□□□□□ -2.14
RPL40BYKR094C AUR1P36107 401 aaPredicted RBP1.67□□□□□ -2.14
RPL40BYKR094C RIB5P38145 238 aa1.67□□□□□ -2.14
RPL40BYKR094C AXL2P38928 823 aa1.67□□□□□ -2.14
RPL40BYKR094C SEO1P39709 593 aa1.67□□□□□ -2.14
RPL40BYKR094C UTP18P40362 594 aaPredicted RBP1.67□□□□□ -2.14
RPL40BYKR094C SSU1P41930 458 aa1.67□□□□□ -2.14
RPL40BYKR094C HXT11P54862 567 aa1.67□□□□□ -2.14
RPL40BYKR094C MDM1Q01846 1127 aa1.67□□□□□ -2.14
RPL40BYKR094C SVL3Q03088 825 aaKnown RBP1.67□□□□□ -2.14
RPL40BYKR094C VIP1Q06685 1146 aaKnown RBP1.67□□□□□ -2.14
RPL40BYKR094C HUA2Q12134 243 aa1.67□□□□□ -2.14
RPL40BYKR094C FUM1P08417 488 aaKnown RBP1.66□□□□□ -2.14
RPL40BYKR094C HSC82P15108 705 aaKnown RBP1.66□□□□□ -2.14
RPL40BYKR094C YIH1P25637 258 aa1.66□□□□□ -2.14
RPL40BYKR094C ATP11P32453 318 aa1.66□□□□□ -2.14
RPL40BYKR094C YBL029WP38201 376 aa1.66□□□□□ -2.14
RPL40BYKR094C AFG3P39925 761 aa1.66□□□□□ -2.14
RPL40BYKR094C SIP4P46954 829 aa1.66□□□□□ -2.14
RPL40BYKR094C MEP3P53390 489 aa1.66□□□□□ -2.14
RPL40BYKR094C MRP51Q02950 344 aa1.66□□□□□ -2.14
RPL40BYKR094C YML037CQ03703 340 aa1.66□□□□□ -2.14
RPL40BYKR094C SPC19Q03954 165 aa1.66□□□□□ -2.14
RPL40BYKR094C ECM11Q04110 302 aa1.66□□□□□ -2.14
RPL40BYKR094C IRC25Q07951 179 aa1.66□□□□□ -2.14
RPL40BYKR094C YDR056CQ12025 205 aa1.66□□□□□ -2.14
RPL40BYKR094C RRI2Q12348 645 aa1.66□□□□□ -2.14
RPL40BYKR094C YAR066WP0CX18 203 aa1.65□□□□□ -2.15
RPL40BYKR094C YHR214WP0CX19 203 aa1.65□□□□□ -2.15
RPL40BYKR094C CDC24P11433 854 aaPredicted RBP1.65□□□□□ -2.15
RPL40BYKR094C MRP7P12687 371 aa1.65□□□□□ -2.15
RPL40BYKR094C NDE1P40215 560 aa1.65□□□□□ -2.15
RPL40BYKR094C LYS14P40971 790 aa1.65□□□□□ -2.15
RPL40BYKR094C TRS85P46944 698 aa1.65□□□□□ -2.15
RPL40BYKR094C SRB7P47822 140 aa1.65□□□□□ -2.15
RPL40BYKR094C FMP40Q08968 688 aaPredicted RBP1.65□□□□□ -2.15
RPL40BYKR094C SPE4Q12455 300 aa1.65□□□□□ -2.15
RPL40BYKR094C RTP1Q12751 981 aa1.65□□□□□ -2.15
RPL40BYKR094C SEC53P07283 254 aaKnown RBP1.64□□□□□ -2.15
RPL40BYKR094C CDC16P09798 840 aa1.64□□□□□ -2.15
RPL40BYKR094C AAC3P18238 307 aa1.64□□□□□ -2.15
RPL40BYKR094C PEP3P27801 918 aa1.64□□□□□ -2.15
RPL40BYKR094C IMP2'P32351 346 aa1.64□□□□□ -2.15
RPL40BYKR094C NPL6P32832 435 aa1.64□□□□□ -2.15
RPL40BYKR094C MUD2P36084 527 aaKnown RBP1.64□□□□□ -2.15
RPL40BYKR094C NOP4P37838 685 aaKnown RBP1.64□□□□□ -2.15
RPL40BYKR094C MST28P39552 234 aa1.64□□□□□ -2.15
RPL40BYKR094C AIM10P39965 576 aaKnown RBP1.64□□□□□ -2.15
RPL40BYKR094C NOP16P40007 231 aaKnown RBP1.64□□□□□ -2.15
RPL40BYKR094C SYG1P40528 902 aa1.64□□□□□ -2.15
RPL40BYKR094C ARF3P40994 183 aaRIP-Chip data1.64□□□□□ -2.15not detected
RPL40BYKR094C RMD8P43620 662 aa1.64□□□□□ -2.15
RPL40BYKR094C LCL3P53153 274 aa1.64□□□□□ -2.15
RPL40BYKR094C IPI3P53877 555 aa1.64□□□□□ -2.15
RPL40BYKR094C RPT6Q01939 405 aaKnown RBP1.64□□□□□ -2.15
RPL40BYKR094C MED1Q12321 566 aa1.64□□□□□ -2.15
RPL40BYKR094C YBR126W-AQ8TGU7 68 aa1.64□□□□□ -2.15
RPL40BYKR094C RAD61Q99359 647 aa1.64□□□□□ -2.15
RPL40BYKR094C SEM1O94742 89 aa1.63□□□□□ -2.15
RPL40BYKR094C KAR3P17119 729 aa1.63□□□□□ -2.15
RPL40BYKR094C FUR1P18562 216 aaKnown RBP1.63□□□□□ -2.15
RPL40BYKR094C MPE1P35728 441 aaKnown RBP1.63□□□□□ -2.15
RPL40BYKR094C MRPS9P38120 278 aa1.63□□□□□ -2.15
RPL40BYKR094C KEL1P38853 1164 aaKnown RBP1.63□□□□□ -2.15
RPL40BYKR094C DPH1P40487 425 aaKnown RBP1.63□□□□□ -2.15
RPL40BYKR094C ARC1P46672 376 aaKnown RBP1.63□□□□□ -2.15
RPL40BYKR094C MDG1P53885 366 aa1.63□□□□□ -2.15
RPL40BYKR094C PPM1Q04081 328 aa1.63□□□□□ -2.15
RPL40BYKR094C RCN2Q12044 265 aa1.63□□□□□ -2.15
RPL40BYKR094C GCN4P03069 281 aa1.62□□□□□ -2.15
RPL40BYKR094C CDC31P06704 161 aaKnown RBP1.62□□□□□ -2.15
RPL40BYKR094C COR1P07256 457 aa1.62□□□□□ -2.15
RPL40BYKR094C POL4P25615 582 aa1.62□□□□□ -2.15
RPL40BYKR094C POP5P28005 173 aa1.62□□□□□ -2.15
RPL40BYKR094C REG2P38232 338 aa1.62□□□□□ -2.15
RPL40BYKR094C YBR137WP38276 179 aa1.62□□□□□ -2.15
RPL40BYKR094C TIM17P39515 158 aa1.62□□□□□ -2.15
RPL40BYKR094C LAM5P43560 674 aa1.62□□□□□ -2.15
RPL40BYKR094C MRPL19P53875 158 aa1.62□□□□□ -2.15
RPL40BYKR094C PNG1Q02890 363 aa1.62□□□□□ -2.15
RPL40BYKR094C NOP58Q12499 511 aaKnown RBP1.62□□□□□ -2.15
RPL40BYKR094C FOB1O13329 566 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 116 ms