RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C ERG1P32476 496 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C MSN4P33749 630 aa3.95□□□□□ -1.78
SRP40YKR092C OCT1P35999 772 aa3.95□□□□□ -1.78
SRP40YKR092C MRPL17P36528 281 aa3.95□□□□□ -1.78
SRP40YKR092C APM3P38153 483 aa3.95□□□□□ -1.78
SRP40YKR092C YHI9P38765 294 aa3.95□□□□□ -1.78
SRP40YKR092C STT3P39007 718 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C TPA1P40032 644 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C OSW5P40219 148 aa3.95□□□□□ -1.78
SRP40YKR092C YIL089WP40500 205 aa3.95□□□□□ -1.78
SRP40YKR092C CAB2P40506 365 aa3.95□□□□□ -1.78
SRP40YKR092C MSS2P40990 351 aa3.95□□□□□ -1.78
SRP40YKR092C DLD2P46681 530 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C GLG2P47011 380 aa3.95□□□□□ -1.78
SRP40YKR092C UPF3P48412 387 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C CTF18P49956 741 aa3.95□□□□□ -1.78
SRP40YKR092C MRK1P50873 501 aa3.95□□□□□ -1.78
SRP40YKR092C YGL242CP53066 181 aa3.95□□□□□ -1.78
SRP40YKR092C COQ6P53318 479 aa3.95□□□□□ -1.78
SRP40YKR092C YNR068CP53754 272 aa3.95□□□□□ -1.78
SRP40YKR092C RLI1Q03195 608 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C RMT2Q03305 412 aa3.95□□□□□ -1.78
SRP40YKR092C ECM18Q04623 453 aa3.95□□□□□ -1.78
SRP40YKR092C GTO3Q04806 366 aa3.95□□□□□ -1.78
SRP40YKR092C UTP21Q06078 939 aaPredicted RBP3.95□□□□□ -1.78
SRP40YKR092C SPO77Q06134 477 aa3.95□□□□□ -1.78
SRP40YKR092C PDR8Q06149 701 aa3.95□□□□□ -1.78
SRP40YKR092C DIB1Q06819 143 aaPredicted RBP3.95□□□□□ -1.78
SRP40YKR092C CMS1Q07897 291 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C YEH2Q07950 538 aa3.95□□□□□ -1.78
SRP40YKR092C DDC1Q08949 612 aa3.95□□□□□ -1.78
SRP40YKR092C DAS2Q12084 232 aa3.95□□□□□ -1.78
SRP40YKR092C AEP3Q12089 606 aa3.95□□□□□ -1.78
SRP40YKR092C MSH5Q12175 901 aa3.95□□□□□ -1.78
SRP40YKR092C PDH1Q12428 516 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C YKL068W-AQ3E826 78 aa3.95□□□□□ -1.78
SRP40YKR092C RAD61Q99359 647 aa3.95□□□□□ -1.78
SRP40YKR092C TY1B-NL2Q99337 1749 aaKnown RBP3.95□□□□□ -1.78
SRP40YKR092C YRF1-2P40105 1681 aa3.94□□□□□ -1.78
SRP40YKR092C AAC1P04710 309 aa3.94□□□□□ -1.78
SRP40YKR092C TUB1P09733 447 aaKnown RBP3.94□□□□□ -1.78
SRP40YKR092C SEC18P18759 758 aaKnown RBP3.94□□□□□ -1.78
SRP40YKR092C CLB4P24871 460 aa3.94□□□□□ -1.78
SRP40YKR092C STE50P25344 346 aa3.94□□□□□ -1.78
SRP40YKR092C BOS1P25385 244 aa3.94□□□□□ -1.78
SRP40YKR092C GEX1P25596 615 aa3.94□□□□□ -1.78
SRP40YKR092C PHO91P27514 894 aa3.94□□□□□ -1.78
SRP40YKR092C YMC1P32331 307 aa3.94□□□□□ -1.78
SRP40YKR092C CDC5P32562 705 aa3.94□□□□□ -1.78
SRP40YKR092C SRL3P36167 246 aa3.94□□□□□ -1.78
SRP40YKR092C CHK1P38147 527 aa3.94□□□□□ -1.78
SRP40YKR092C GDT1P38301 280 aaPredicted RBP3.94□□□□□ -1.78
SRP40YKR092C NTC20P38302 140 aaPredicted RBP3.94□□□□□ -1.78
SRP40YKR092C SDH8P38345 138 aa3.94□□□□□ -1.78
SRP40YKR092C RRP3P38712 501 aaKnown RBP3.94□□□□□ -1.78
SRP40YKR092C GND1P38720 489 aaKnown RBP3.94□□□□□ -1.78
SRP40YKR092C YER184CP39961 794 aa3.94□□□□□ -1.78
SRP40YKR092C YER186CP40101 306 aa3.94□□□□□ -1.78
SRP40YKR092C UBP7P40453 1071 aa3.94□□□□□ -1.78
SRP40YKR092C NAS2P40555 220 aa3.94□□□□□ -1.78
SRP40YKR092C TFG2P41896 400 aaPredicted RBP3.94□□□□□ -1.78
SRP40YKR092C SAM50P53969 484 aa3.94□□□□□ -1.78
SRP40YKR092C YPL107WQ02873 248 aa3.94□□□□□ -1.78
SRP40YKR092C SRL4Q03085 281 aa3.94□□□□□ -1.78
SRP40YKR092C RSN1Q03516 953 aa3.94□□□□□ -1.78
SRP40YKR092C VPS64Q03944 604 aa3.94□□□□□ -1.78
SRP40YKR092C ATC1Q04005 294 aa3.94□□□□□ -1.78
SRP40YKR092C URC2Q04411 772 aa3.94□□□□□ -1.78
SRP40YKR092C SML1Q04964 104 aa3.94□□□□□ -1.78
SRP40YKR092C DCS1Q06151 350 aa3.94□□□□□ -1.78
SRP40YKR092C RPN8Q08723 338 aaKnown RBP3.94□□□□□ -1.78
SRP40YKR092C ULA1Q12059 462 aa3.94□□□□□ -1.78
SRP40YKR092C YDL109CQ12103 647 aa3.94□□□□□ -1.78
SRP40YKR092C YPL150WQ12152 901 aa3.94□□□□□ -1.78
SRP40YKR092C TY3A-GQ12173 290 aa3.94□□□□□ -1.78
SRP40YKR092C HMS1Q12398 434 aa3.94□□□□□ -1.78
SRP40YKR092C PFK27Q12471 397 aaPredicted RBP3.94□□□□□ -1.78
SRP40YKR092C FRE6Q12473 712 aa3.94□□□□□ -1.78
SRP40YKR092C TY3A-IQ99219 290 aa3.94□□□□□ -1.78
SRP40YKR092C HIS4P00815 799 aaKnown RBP3.93□□□□□ -1.78
SRP40YKR092C SSA3P09435 649 aaKnown RBP3.93□□□□□ -1.78
SRP40YKR092C MATALPHA2P0CY08 210 aa3.93□□□□□ -1.78
SRP40YKR092C HMLALPHA2P0CY09 210 aa3.93□□□□□ -1.78
SRP40YKR092C MTF2P10849 440 aa3.93□□□□□ -1.78
SRP40YKR092C TCP1P12612 559 aaKnown RBP3.93□□□□□ -1.78
SRP40YKR092C CKA1P15790 372 aa3.93□□□□□ -1.78
SRP40YKR092C POL30P15873 258 aaKnown RBP3.93□□□□□ -1.78
SRP40YKR092C RNR3P21672 869 aaKnown RBP3.93□□□□□ -1.78
SRP40YKR092C SIR1P21691 654 aa3.93□□□□□ -1.78
SRP40YKR092C CRM1P30822 1084 aaKnown RBP3.93□□□□□ -1.78
SRP40YKR092C MRPL9P31334 269 aa3.93□□□□□ -1.78
SRP40YKR092C ATP11P32453 318 aa3.93□□□□□ -1.78
SRP40YKR092C SUA5P32579 426 aa3.93□□□□□ -1.78
SRP40YKR092C YBL010CP32788 280 aa3.93□□□□□ -1.78
SRP40YKR092C LOS1P33418 1100 aaPredicted RBP3.93□□□□□ -1.78
SRP40YKR092C SRB2P34162 210 aa3.93□□□□□ -1.78
SRP40YKR092C DAD2P36162 133 aa3.93□□□□□ -1.78
SRP40YKR092C MRPL37P36532 105 aa3.93□□□□□ -1.78
SRP40YKR092C SIF2P38262 535 aa3.93□□□□□ -1.78
SRP40YKR092C BMT2P38278 337 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms