RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C YNL234WP53857 426 aa2.24□□□□□ -2.05
SHE2YKL130C YNL181WP53878 407 aa2.24□□□□□ -2.05
SHE2YKL130C SLG1P54867 378 aa2.24□□□□□ -2.05
SHE2YKL130C SHR3Q02774 210 aa2.24□□□□□ -2.05
SHE2YKL130C CTL1Q03220 320 aaKnown RBP2.24□□□□□ -2.05
SHE2YKL130C ACL4Q03771 387 aa2.24□□□□□ -2.05
SHE2YKL130C YMR130WQ04223 302 aa2.24□□□□□ -2.05
SHE2YKL130C RSF1Q05043 376 aa2.24□□□□□ -2.05
SHE2YKL130C YDR286CQ05530 114 aa2.24□□□□□ -2.05
SHE2YKL130C HEL2Q05580 639 aaKnown RBP2.24□□□□□ -2.05
SHE2YKL130C SIL1Q08199 421 aa2.24□□□□□ -2.05
SHE2YKL130C UAF30Q08747 228 aa2.24□□□□□ -2.05
SHE2YKL130C RDR1Q08904 546 aa2.24□□□□□ -2.05
SHE2YKL130C AEP3Q12089 606 aa2.24□□□□□ -2.05
SHE2YKL130C NCE102Q12207 173 aaRIP-Chip data2.24□□□□□ -2.05not detected
SHE2YKL130C ECM5Q03214 1411 aa2.24□□□□□ -2.05
SHE2YKL130C SPT6P23615 1451 aaKnown RBP2.23□□□□□ -2.05
SHE2YKL130C RPL6BP05739 176 aaKnown RBP2.23□□□□□ -2.05
SHE2YKL130C RPL1AP0CX43 217 aaKnown RBP2.23□□□□□ -2.05
SHE2YKL130C RPL1BP0CX44 217 aaKnown RBP2.23□□□□□ -2.05
SHE2YKL130C VMA2P16140 517 aaKnown RBP2.23□□□□□ -2.05
SHE2YKL130C SPO7P18410 259 aa2.23□□□□□ -2.05
SHE2YKL130C URA4P20051 364 aa2.23□□□□□ -2.05
SHE2YKL130C CLN1P20437 546 aa2.23□□□□□ -2.05
SHE2YKL130C MGR1P25573 417 aa2.23□□□□□ -2.05
SHE2YKL130C CPR3P25719 182 aa2.23□□□□□ -2.05
SHE2YKL130C MCM4P30665 933 aaKnown RBP2.23□□□□□ -2.05
SHE2YKL130C REC114P32841 428 aa2.23□□□□□ -2.05
SHE2YKL130C TRS65P32893 560 aa2.23□□□□□ -2.05
SHE2YKL130C HEL1P36113 551 aa2.23□□□□□ -2.05
SHE2YKL130C LAS1P36146 502 aaPredicted RBP2.23□□□□□ -2.05
SHE2YKL130C DAD2P36162 133 aa2.23□□□□□ -2.05
SHE2YKL130C CBP4P37267 147 aa2.23□□□□□ -2.05
SHE2YKL130C THI2P38141 450 aa2.23□□□□□ -2.05
SHE2YKL130C DUG2P38149 878 aa2.23□□□□□ -2.05
SHE2YKL130C TCM62P38228 572 aaKnown RBP2.23□□□□□ -2.05
SHE2YKL130C MMS4P38257 691 aa2.23□□□□□ -2.05
SHE2YKL130C VHC1P38329 1120 aa2.23□□□□□ -2.05
SHE2YKL130C PHO90P39535 881 aa2.23□□□□□ -2.05
SHE2YKL130C EFM4P40516 257 aa2.23□□□□□ -2.05
SHE2YKL130C HXT9P40885 567 aa2.23□□□□□ -2.05
SHE2YKL130C YJL132WP47014 750 aa2.23□□□□□ -2.05
SHE2YKL130C OCA1P50946 238 aaPredicted RBP2.23□□□□□ -2.05
SHE2YKL130C ZPR1P53303 486 aaKnown RBP2.23□□□□□ -2.05
SHE2YKL130C RPL6AQ02326 176 aaKnown RBP2.23□□□□□ -2.05
SHE2YKL130C YDR415CQ04033 374 aaPredicted RBP2.23□□□□□ -2.05
SHE2YKL130C MMR1Q06324 491 aa2.23□□□□□ -2.05
SHE2YKL130C YDL218WQ07629 317 aa2.23□□□□□ -2.05
SHE2YKL130C YOR365CQ08844 703 aa2.23□□□□□ -2.05
SHE2YKL130C VAM3Q12241 283 aa2.23□□□□□ -2.05
SHE2YKL130C FRE6Q12473 712 aa2.23□□□□□ -2.05
SHE2YKL130C TY1B-DR4Q07793 1604 aa2.22□□□□□ -2.05
SHE2YKL130C RIP1P08067 215 aa2.22□□□□□ -2.05
SHE2YKL130C BAR1P12630 587 aa2.22□□□□□ -2.05
SHE2YKL130C REV1P12689 985 aa2.22□□□□□ -2.05
SHE2YKL130C SGV1P23293 657 aaKnown RBP2.22□□□□□ -2.05
SHE2YKL130C HIR2P32480 875 aa2.22□□□□□ -2.05
SHE2YKL130C MSN2P33748 704 aa2.22□□□□□ -2.05
SHE2YKL130C WSS1P38838 269 aa2.22□□□□□ -2.05
SHE2YKL130C KRE9P39005 276 aa2.22□□□□□ -2.05
SHE2YKL130C TIF4631P39935 952 aaKnown RBP2.22□□□□□ -2.05
SHE2YKL130C YJR154WP47181 346 aa2.22□□□□□ -2.05
SHE2YKL130C ALT2P52892 507 aa2.22□□□□□ -2.05
SHE2YKL130C MLC1P53141 149 aa2.22□□□□□ -2.05
SHE2YKL130C SOL4P53315 255 aa2.22□□□□□ -2.05
SHE2YKL130C SMA1Q02651 245 aa2.22□□□□□ -2.05
SHE2YKL130C YPL107WQ02873 248 aa2.22□□□□□ -2.05
SHE2YKL130C PRP42Q03776 544 aaKnown RBP2.22□□□□□ -2.05
SHE2YKL130C PPM1Q04081 328 aa2.22□□□□□ -2.05
SHE2YKL130C DCS1Q06151 350 aa2.22□□□□□ -2.05
SHE2YKL130C SSK1Q07084 712 aa2.22□□□□□ -2.05
SHE2YKL130C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
SHE2YKL130C CUE5Q08412 411 aaKnown RBP2.22□□□□□ -2.05
SHE2YKL130C NFI1Q12216 726 aa2.22□□□□□ -2.05
SHE2YKL130C MTR10Q99189 972 aa2.22□□□□□ -2.05
SHE2YKL130C EDE1P34216 1381 aa2.22□□□□□ -2.05
SHE2YKL130C YLR278CQ05854 1341 aa2.21□□□□□ -2.06
SHE2YKL130C STF1P01098 86 aa2.21□□□□□ -2.06
SHE2YKL130C RAD52P06778 471 aaKnown RBP2.21□□□□□ -2.06
SHE2YKL130C LPD1P09624 499 aaKnown RBP2.21□□□□□ -2.06
SHE2YKL130C ATP10P18496 279 aa2.21□□□□□ -2.06
SHE2YKL130C TYR1P20049 452 aa2.21□□□□□ -2.06
SHE2YKL130C TRX1P22217 103 aaKnown RBP2.21□□□□□ -2.06
SHE2YKL130C PHO84P25297 587 aaKnown RBP2.21□□□□□ -2.06
SHE2YKL130C KRE2P27809 442 aa2.21□□□□□ -2.06
SHE2YKL130C MSP1P28737 362 aa2.21□□□□□ -2.06
SHE2YKL130C RRP1P35178 278 aaPredicted RBP2.21□□□□□ -2.06
SHE2YKL130C UIP5P36137 443 aa2.21□□□□□ -2.06
SHE2YKL130C POP2P39008 433 aa2.21□□□□□ -2.06
SHE2YKL130C SER3P40054 469 aa2.21□□□□□ -2.06
SHE2YKL130C IAH1P41734 238 aa2.21□□□□□ -2.06
SHE2YKL130C POP1P41812 875 aa2.21□□□□□ -2.06
SHE2YKL130C TFG2P41896 400 aaPredicted RBP2.21□□□□□ -2.06
SHE2YKL130C RPS0BP46654 252 aaKnown RBP2.21□□□□□ -2.06
SHE2YKL130C BUD4P47136 1447 aa2.21□□□□□ -2.06
SHE2YKL130C TOM22P49334 152 aa2.21□□□□□ -2.06
SHE2YKL130C PKP2P53170 491 aa2.21□□□□□ -2.06
SHE2YKL130C BUD32P53323 261 aa2.21□□□□□ -2.06
SHE2YKL130C RHO4Q00246 291 aa2.21□□□□□ -2.06
SHE2YKL130C DIS3Q08162 1001 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms