RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C RAD14P28519 371 aa1.47□□□□□ -2.17
VPS55YJR044C SAC1P32368 623 aaKnown RBP1.47□□□□□ -2.17
VPS55YJR044C ERG1P32476 496 aaKnown RBP1.47□□□□□ -2.17
VPS55YJR044C SSE1P32589 693 aaKnown RBP1.47□□□□□ -2.17
VPS55YJR044C REC114P32841 428 aa1.47□□□□□ -2.17
VPS55YJR044C WBP1P33767 430 aaKnown RBP1.47□□□□□ -2.17
VPS55YJR044C TUL1P36096 758 aa1.47□□□□□ -2.17
VPS55YJR044C DAD2P36162 133 aa1.47□□□□□ -2.17
VPS55YJR044C RPL32P38061 130 aaKnown RBP1.47□□□□□ -2.17
VPS55YJR044C TIF5P38431 405 aaKnown RBP1.47□□□□□ -2.17
VPS55YJR044C ARP1P38696 384 aa1.47□□□□□ -2.17
VPS55YJR044C MDM31P38880 579 aa1.47□□□□□ -2.17
VPS55YJR044C CIN4P39110 191 aa1.47□□□□□ -2.17
VPS55YJR044C PCL7P40186 285 aa1.47□□□□□ -2.17
VPS55YJR044C MEP1P40260 492 aa1.47□□□□□ -2.17
VPS55YJR044C YIL060WP40519 144 aa1.47□□□□□ -2.17
VPS55YJR044C POP1P41812 875 aa1.47□□□□□ -2.17
VPS55YJR044C SWP82P43554 623 aa1.47□□□□□ -2.17
VPS55YJR044C EPL1P43572 832 aa1.47□□□□□ -2.17
VPS55YJR044C TCB2P48231 1178 aa1.47□□□□□ -2.17
VPS55YJR044C HST1P53685 503 aa1.47□□□□□ -2.17
VPS55YJR044C INA17Q02888 182 aa1.47□□□□□ -2.17
VPS55YJR044C ARX1Q03862 593 aaKnown RBP1.47□□□□□ -2.17
VPS55YJR044C PPM1Q04081 328 aa1.47□□□□□ -2.17
VPS55YJR044C YDL057WQ07379 328 aa1.47□□□□□ -2.17
VPS55YJR044C DIS3Q08162 1001 aaKnown RBP1.47□□□□□ -2.17
VPS55YJR044C MDY2Q12285 212 aa1.47□□□□□ -2.17
VPS55YJR044C RPL15AP05748 204 aaKnown RBP1.46□□□□□ -2.18
VPS55YJR044C HIP1P06775 603 aa1.46□□□□□ -2.18
VPS55YJR044C GDH1P07262 454 aaKnown RBP1.46□□□□□ -2.18
VPS55YJR044C MRP13P12686 339 aa1.46□□□□□ -2.18
VPS55YJR044C DAL5P15365 543 aa1.46□□□□□ -2.18
VPS55YJR044C SPO7P18410 259 aa1.46□□□□□ -2.18
VPS55YJR044C RPB8P20436 146 aa1.46□□□□□ -2.18
VPS55YJR044C SPB1P25582 841 aaPredicted RBP1.46□□□□□ -2.18
VPS55YJR044C HXT3P32466 567 aaKnown RBP1.46□□□□□ -2.18
VPS55YJR044C ECM25P32525 599 aa1.46□□□□□ -2.18
VPS55YJR044C GYP6P32806 458 aa1.46□□□□□ -2.18
VPS55YJR044C MRE11P32829 692 aa1.46□□□□□ -2.18
VPS55YJR044C YBL055CP34220 418 aaPredicted RBP1.46□□□□□ -2.18
VPS55YJR044C ROT2P38138 954 aa1.46□□□□□ -2.18
VPS55YJR044C SLM4P38247 162 aa1.46□□□□□ -2.18
VPS55YJR044C ERG7P38604 731 aa1.46□□□□□ -2.18
VPS55YJR044C ELO1P39540 310 aa1.46□□□□□ -2.18
VPS55YJR044C YTA12P40341 825 aa1.46□□□□□ -2.18
VPS55YJR044C YDL186WP48568 277 aa1.46□□□□□ -2.18
VPS55YJR044C CUE3P53137 624 aaKnown RBP1.46□□□□□ -2.18
VPS55YJR044C RMD9P53140 646 aaKnown RBP1.46□□□□□ -2.18
VPS55YJR044C PIB2P53191 635 aa1.46□□□□□ -2.18
VPS55YJR044C RRP46P53256 223 aaPredicted RBP1.46□□□□□ -2.18
VPS55YJR044C YGR126WP53274 230 aa1.46□□□□□ -2.18
VPS55YJR044C TOF1P53840 1238 aa1.46□□□□□ -2.18
VPS55YJR044C RHO5P53879 331 aaKnown RBP1.46□□□□□ -2.18
VPS55YJR044C AQR1P53943 586 aa1.46□□□□□ -2.18
VPS55YJR044C EFM6P53970 246 aa1.46□□□□□ -2.18
VPS55YJR044C RPA49Q01080 415 aaPredicted RBP1.46□□□□□ -2.18
VPS55YJR044C SKO1Q02100 647 aa1.46□□□□□ -2.18
VPS55YJR044C TOF2Q02208 771 aa1.46□□□□□ -2.18
VPS55YJR044C YMR178WQ03219 274 aaKnown RBP1.46□□□□□ -2.18
VPS55YJR044C HCR1Q05775 265 aaKnown RBP1.46□□□□□ -2.18
VPS55YJR044C SIL1Q08199 421 aa1.46□□□□□ -2.18
VPS55YJR044C REX3Q12090 404 aa1.46□□□□□ -2.18
VPS55YJR044C PFK27Q12471 397 aaPredicted RBP1.46□□□□□ -2.18
VPS55YJR044C YDL007C-AQ2V2Q0 85 aa1.46□□□□□ -2.18
VPS55YJR044C TFB5Q3E7C1 72 aaPredicted RBP1.46□□□□□ -2.18
VPS55YJR044C BRR1Q99177 341 aaPredicted RBP1.46□□□□□ -2.18
VPS55YJR044C FAB1P34756 2278 aa1.46□□□□□ -2.18
VPS55YJR044C RHO2P06781 192 aa1.45□□□□□ -2.18
VPS55YJR044C LPD1P09624 499 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C RPL31BP0C2H9 113 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C CLN1P20437 546 aa1.45□□□□□ -2.18
VPS55YJR044C KGD1P20967 1014 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C PRD1P25375 712 aa1.45□□□□□ -2.18
VPS55YJR044C RPS2P25443 254 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C PUP3P25451 205 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C DAL80P26343 269 aa1.45□□□□□ -2.18
VPS55YJR044C RIM1P32445 135 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C RML2P32611 393 aa1.45□□□□□ -2.18
VPS55YJR044C SEC66P33754 206 aa1.45□□□□□ -2.18
VPS55YJR044C SNU114P36048 1008 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C YKL023WP36103 277 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C SPC34P36131 295 aa1.45□□□□□ -2.18
VPS55YJR044C UIP5P36137 443 aa1.45□□□□□ -2.18
VPS55YJR044C YBL028CP38202 106 aa1.45□□□□□ -2.18
VPS55YJR044C VHC1P38329 1120 aa1.45□□□□□ -2.18
VPS55YJR044C TSC10P38342 320 aa1.45□□□□□ -2.18
VPS55YJR044C ANS1P38832 159 aa1.45□□□□□ -2.18
VPS55YJR044C PTH1P38876 190 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C FAD1P38913 306 aa1.45□□□□□ -2.18
VPS55YJR044C CCT6P39079 546 aa1.45□□□□□ -2.18
VPS55YJR044C PCF11P39081 626 aaPredicted RBP1.45□□□□□ -2.18
VPS55YJR044C PHO90P39535 881 aa1.45□□□□□ -2.18
VPS55YJR044C PES4P39684 611 aa1.45□□□□□ -2.18
VPS55YJR044C RTT105P40063 208 aa1.45□□□□□ -2.18
VPS55YJR044C PRE5P40302 234 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C DIM1P41819 318 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C ALK1P43633 760 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C SNG1P46950 547 aa1.45□□□□□ -2.18
VPS55YJR044C YJL132WP47014 750 aa1.45□□□□□ -2.18
VPS55YJR044C MDE1P47095 244 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms