RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C HAT2P39984 401 aa3.32□□□□□ -1.88
CTK2YJL006C POP1P41812 875 aa3.32□□□□□ -1.88
CTK2YJL006C YGL108CP53139 140 aa3.32□□□□□ -1.88
CTK2YJL006C ATR1P13090 542 aa3.31□□□□□ -1.88
CTK2YJL006C BUB3P26449 341 aa3.31□□□□□ -1.88
CTK2YJL006C RAD14P28519 371 aa3.31□□□□□ -1.88
CTK2YJL006C PMU1P36069 295 aa3.31□□□□□ -1.88
CTK2YJL006C ALG8P40351 577 aa3.31□□□□□ -1.88
CTK2YJL006C SYG1P40528 902 aa3.31□□□□□ -1.88
CTK2YJL006C SRB7P47822 140 aa3.31□□□□□ -1.88
CTK2YJL006C OCA1P50946 238 aaPredicted RBP3.31□□□□□ -1.88
CTK2YJL006C RKM5Q12367 367 aa3.31□□□□□ -1.88
CTK2YJL006C RHO2P06781 192 aa3.3□□□□□ -1.88
CTK2YJL006C NPL6P32832 435 aa3.3□□□□□ -1.88
CTK2YJL006C TUL1P36096 758 aa3.3□□□□□ -1.88
CTK2YJL006C OTU2P38747 307 aaKnown RBP3.3□□□□□ -1.88
CTK2YJL006C FAU1P40099 211 aa3.3□□□□□ -1.88
CTK2YJL006C ELP2P42935 788 aa3.3□□□□□ -1.88
CTK2YJL006C GWT1P47026 490 aa3.3□□□□□ -1.88
CTK2YJL006C YLR287CQ05881 355 aa3.3□□□□□ -1.88
CTK2YJL006C TMC1Q08422 150 aaPredicted RBP3.3□□□□□ -1.88
CTK2YJL006C KOG1P38873 1557 aa3.29□□□□□ -1.88
CTK2YJL006C YML133CQ03099 1374 aa3.29□□□□□ -1.88
CTK2YJL006C YLL067CQ07888 1374 aa3.29□□□□□ -1.88
CTK2YJL006C YLL066CQ99208 1374 aa3.29□□□□□ -1.88
CTK2YJL006C RED1P14291 827 aa3.29□□□□□ -1.88
CTK2YJL006C ATP10P18496 279 aa3.29□□□□□ -1.88
CTK2YJL006C SPB1P25582 841 aaPredicted RBP3.29□□□□□ -1.88
CTK2YJL006C AFG1P32317 509 aa3.29□□□□□ -1.88
CTK2YJL006C ERG3P32353 365 aa3.29□□□□□ -1.88
CTK2YJL006C GYP6P32806 458 aa3.29□□□□□ -1.88
CTK2YJL006C JNM1P36224 373 aa3.29□□□□□ -1.88
CTK2YJL006C THI2P38141 450 aa3.29□□□□□ -1.88
CTK2YJL006C VMA13P41807 478 aaKnown RBP3.29□□□□□ -1.88
CTK2YJL006C YGR149WP48236 432 aa3.29□□□□□ -1.88
CTK2YJL006C SDT1P53078 280 aa3.29□□□□□ -1.88
CTK2YJL006C WSC2P53832 503 aa3.29□□□□□ -1.88
CTK2YJL006C SYF1Q04048 859 aaPredicted RBP3.29□□□□□ -1.88
CTK2YJL006C HNT3Q08702 217 aa3.29□□□□□ -1.88
CTK2YJL006C RTN2Q12443 393 aa3.29□□□□□ -1.88
CTK2YJL006C RRD2Q12461 358 aa3.29□□□□□ -1.88
CTK2YJL006C CTF3Q12748 733 aa3.29□□□□□ -1.88
CTK2YJL006C LEU4P06208 619 aaKnown RBP3.28□□□□□ -1.88
CTK2YJL006C FRE2P36033 711 aa3.28□□□□□ -1.88
CTK2YJL006C RSM22P36056 628 aa3.28□□□□□ -1.88
CTK2YJL006C RMD9P53140 646 aaKnown RBP3.28□□□□□ -1.88
CTK2YJL006C GIR2Q03768 265 aaPredicted RBP3.28□□□□□ -1.88
CTK2YJL006C SOV1Q04748 898 aa3.28□□□□□ -1.88
CTK2YJL006C VTA1Q06263 330 aa3.28□□□□□ -1.88
CTK2YJL006C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
CTK2YJL006C SCM3Q12334 223 aa3.28□□□□□ -1.88
CTK2YJL006C SFI1Q12369 946 aa3.28□□□□□ -1.88
CTK2YJL006C PGA3Q12746 312 aaKnown RBP3.28□□□□□ -1.88
CTK2YJL006C LPD1P09624 499 aaKnown RBP3.27□□□□□ -1.89
CTK2YJL006C SPS4P09937 338 aa3.27□□□□□ -1.89
CTK2YJL006C PUT3P25502 979 aaPredicted RBP3.27□□□□□ -1.89
CTK2YJL006C HXT3P32466 567 aaKnown RBP3.27□□□□□ -1.89
CTK2YJL006C CBP4P37267 147 aa3.27□□□□□ -1.89
CTK2YJL006C OGG1P53397 376 aaPredicted RBP3.27□□□□□ -1.89
CTK2YJL006C ARK1P53974 638 aa3.27□□□□□ -1.89
CTK2YJL006C YOR387CQ08910 206 aa3.27□□□□□ -1.89
CTK2YJL006C YOL159C-AQ3E769 90 aa3.27□□□□□ -1.89
CTK2YJL006C YER078W-AQ3E7A2 54 aa3.27□□□□□ -1.89
CTK2YJL006C PPH22P23595 377 aa3.26□□□□□ -1.89
CTK2YJL006C IDH2P28241 369 aaKnown RBP3.26□□□□□ -1.89
CTK2YJL006C ISC1P40015 477 aaKnown RBP3.26□□□□□ -1.89
CTK2YJL006C TFG2P41896 400 aaPredicted RBP3.26□□□□□ -1.89
CTK2YJL006C DLD2P46681 530 aaKnown RBP3.26□□□□□ -1.89
CTK2YJL006C YGL039WP53183 348 aaKnown RBP3.26□□□□□ -1.89
CTK2YJL006C BTN2P53286 410 aa3.26□□□□□ -1.89
CTK2YJL006C NCS2P53923 493 aaPredicted RBP3.26□□□□□ -1.89
CTK2YJL006C RPA49Q01080 415 aaPredicted RBP3.26□□□□□ -1.89
CTK2YJL006C SOD1P00445 154 aaKnown RBP3.25□□□□□ -1.89
CTK2YJL006C GPH1P06738 902 aaKnown RBP3.25□□□□□ -1.89
CTK2YJL006C RPL3P14126 387 aaKnown RBP3.25□□□□□ -1.89
CTK2YJL006C CLC1P17891 233 aa3.25□□□□□ -1.89
CTK2YJL006C CLB3P24870 427 aa3.25□□□□□ -1.89
CTK2YJL006C RNA14P25298 677 aaKnown RBP3.25□□□□□ -1.89
CTK2YJL006C YCR100CP25606 316 aa3.25□□□□□ -1.89
CTK2YJL006C NDI1P32340 513 aa3.25□□□□□ -1.89
CTK2YJL006C GLC7P32598 312 aaKnown RBP3.25□□□□□ -1.89
CTK2YJL006C SAS3P34218 831 aa3.25□□□□□ -1.89
CTK2YJL006C AVT4P50944 713 aa3.25□□□□□ -1.89
CTK2YJL006C MSO1P53604 210 aaKnown RBP3.25□□□□□ -1.89
CTK2YJL006C PNG1Q02890 363 aa3.25□□□□□ -1.89
CTK2YJL006C PIR3Q03180 325 aa3.25□□□□□ -1.89
CTK2YJL006C NAM9P27929 486 aa3.24□□□□□ -1.89
CTK2YJL006C YIM1P28625 365 aa3.24□□□□□ -1.89
CTK2YJL006C CRM1P30822 1084 aaKnown RBP3.24□□□□□ -1.89
CTK2YJL006C DEG1P31115 442 aaKnown RBP3.24□□□□□ -1.89
CTK2YJL006C PRP21P32524 280 aaPredicted RBP3.24□□□□□ -1.89
CTK2YJL006C REC114P32841 428 aa3.24□□□□□ -1.89
CTK2YJL006C HCS1P34243 683 aa3.24□□□□□ -1.89
CTK2YJL006C RFS1P38234 210 aaKnown RBP3.24□□□□□ -1.89
CTK2YJL006C GCD10P41814 478 aa3.24□□□□□ -1.89
CTK2YJL006C VTC2P43585 828 aa3.24□□□□□ -1.89
CTK2YJL006C TRS85P46944 698 aa3.24□□□□□ -1.89
CTK2YJL006C TIS11P47977 285 aa3.24□□□□□ -1.89
CTK2YJL006C MNP1P53163 194 aaPredicted RBP3.24□□□□□ -1.89
CTK2YJL006C ART5P53244 586 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms