RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W IMA2Q08295 589 aa5.99□□□□□ -1.45
PRE3YJL001W IRC13Q08630 104 aa5.99□□□□□ -1.45
PRE3YJL001W TMA7Q3E764 64 aaKnown RBP5.99□□□□□ -1.45
PRE3YJL001W PRP16P15938 1071 aaPredicted RBP5.98□□□□□ -1.45
PRE3YJL001W TYR1P20049 452 aa5.98□□□□□ -1.45
PRE3YJL001W PHO3P24031 467 aa5.98□□□□□ -1.45
PRE3YJL001W YCL068CP25593 260 aa5.98□□□□□ -1.45
PRE3YJL001W YPT52P36018 234 aaKnown RBP5.98□□□□□ -1.45
PRE3YJL001W DHH1P39517 506 aaKnown RBP5.98□□□□□ -1.45
PRE3YJL001W SCC4P40090 624 aa5.98□□□□□ -1.45
PRE3YJL001W UTP18P40362 594 aaPredicted RBP5.98□□□□□ -1.45
PRE3YJL001W RET2P43621 546 aa5.98□□□□□ -1.45
PRE3YJL001W ZIP2P53061 704 aa5.98□□□□□ -1.45
PRE3YJL001W RIM8P53179 542 aa5.98□□□□□ -1.45
PRE3YJL001W NNF2P53253 936 aa5.98□□□□□ -1.45
PRE3YJL001W MRS2Q01926 470 aa5.98□□□□□ -1.45
PRE3YJL001W FMP45Q07651 309 aa5.98□□□□□ -1.45
PRE3YJL001W TEN1Q07921 160 aa5.98□□□□□ -1.45
PRE3YJL001W YOR352WQ08816 343 aa5.98□□□□□ -1.45
PRE3YJL001W PNO1Q99216 274 aaKnown RBP5.98□□□□□ -1.45
PRE3YJL001W RPL7AP05737 244 aaKnown RBP5.97□□□□□ -1.45
PRE3YJL001W YAR066WP0CX18 203 aa5.97□□□□□ -1.45
PRE3YJL001W YHR214WP0CX19 203 aa5.97□□□□□ -1.45
PRE3YJL001W HOM3P10869 527 aa5.97□□□□□ -1.45
PRE3YJL001W NSP1P14907 823 aaKnown RBP5.97□□□□□ -1.45
PRE3YJL001W CPR3P25719 182 aa5.97□□□□□ -1.45
PRE3YJL001W HRR25P29295 494 aaKnown RBP5.97□□□□□ -1.45
PRE3YJL001W MF(ALPHA)2P32435 120 aa5.97□□□□□ -1.45
PRE3YJL001W THI80P35202 319 aa5.97□□□□□ -1.45
PRE3YJL001W MSG5P38590 489 aa5.97□□□□□ -1.45
PRE3YJL001W MMS21P38632 267 aa5.97□□□□□ -1.45
PRE3YJL001W YFL012WP43580 148 aa5.97□□□□□ -1.45
PRE3YJL001W PET130P47065 347 aa5.97□□□□□ -1.45
PRE3YJL001W RPC17P47076 161 aa5.97□□□□□ -1.45
PRE3YJL001W BNA2P47125 453 aa5.97□□□□□ -1.45
PRE3YJL001W JHD2P47156 728 aaPredicted RBP5.97□□□□□ -1.45
PRE3YJL001W ERG26P53199 349 aaKnown RBP5.97□□□□□ -1.45
PRE3YJL001W YDR109CQ04585 715 aa5.97□□□□□ -1.45
PRE3YJL001W RPL7BQ12213 244 aaKnown RBP5.97□□□□□ -1.45
PRE3YJL001W GLT1Q12680 2145 aaKnown RBP5.96□□□□□ -1.45
PRE3YJL001W COX1P00401 534 aa5.96□□□□□ -1.46
PRE3YJL001W HSP26P15992 214 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
PRE3YJL001W SOL2P37262 315 aa5.96□□□□□ -1.46
PRE3YJL001W PCH2P38126 564 aa5.96□□□□□ -1.46
PRE3YJL001W YHR127WP38833 243 aaKnown RBP5.96□□□□□ -1.46
PRE3YJL001W MPT5P39016 859 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
PRE3YJL001W PBP1P53297 722 aaKnown RBP5.96□□□□□ -1.46
PRE3YJL001W YNL092WP53934 400 aa5.96□□□□□ -1.46
PRE3YJL001W SED5Q01590 340 aa5.96□□□□□ -1.46
PRE3YJL001W MTG1Q03151 367 aaPredicted RBP5.96□□□□□ -1.46
PRE3YJL001W TDA9Q04545 1251 aa5.96□□□□□ -1.46
PRE3YJL001W GAD1Q04792 585 aa5.96□□□□□ -1.46
PRE3YJL001W MDM30Q05930 598 aa5.96□□□□□ -1.46
PRE3YJL001W UPC2Q12151 913 aa5.96□□□□□ -1.46
PRE3YJL001W Q0142Q9ZZW4 58 aa5.96□□□□□ -1.46
PRE3YJL001W YPT1P01123 206 aaKnown RBP5.95□□□□□ -1.46
PRE3YJL001W RPP2AP05319 106 aaKnown RBP5.95□□□□□ -1.46
PRE3YJL001W LAT1P12695 482 aaKnown RBP5.95□□□□□ -1.46
PRE3YJL001W ROX1P25042 368 aa5.95□□□□□ -1.46
PRE3YJL001W PUB1P32588 453 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
PRE3YJL001W SKT5P34226 696 aa5.95□□□□□ -1.46
PRE3YJL001W PEX5P35056 612 aa5.95□□□□□ -1.46
PRE3YJL001W RRP1P35178 278 aaPredicted RBP5.95□□□□□ -1.46
PRE3YJL001W EHT1P38295 451 aa5.95□□□□□ -1.46
PRE3YJL001W SER3P40054 469 aa5.95□□□□□ -1.46
PRE3YJL001W IBA57P47158 497 aa5.95□□□□□ -1.46
PRE3YJL001W GTF1P53260 183 aaPredicted RBP5.95□□□□□ -1.46
PRE3YJL001W ALF1P53904 254 aa5.95□□□□□ -1.46
PRE3YJL001W PRO2P54885 456 aaKnown RBP5.95□□□□□ -1.46
PRE3YJL001W SPP2Q02521 185 aa5.95□□□□□ -1.46
PRE3YJL001W BRE4Q07660 1125 aa5.95□□□□□ -1.46
PRE3YJL001W RAX1Q08760 435 aa5.95□□□□□ -1.46
PRE3YJL001W NUS1Q12063 375 aa5.95□□□□□ -1.46
PRE3YJL001W YOR114WQ12219 294 aa5.95□□□□□ -1.46
PRE3YJL001W PST1Q12355 444 aa5.95□□□□□ -1.46
PRE3YJL001W MET8P15807 274 aa5.94□□□□□ -1.46
PRE3YJL001W CKI1P20485 582 aa5.94□□□□□ -1.46
PRE3YJL001W ATP12P22135 325 aa5.94□□□□□ -1.46
PRE3YJL001W ARG1P22768 420 aa5.94□□□□□ -1.46
PRE3YJL001W CDC20P26309 610 aa5.94□□□□□ -1.46
PRE3YJL001W SRB4P32569 687 aa5.94□□□□□ -1.46
PRE3YJL001W LST4P34239 828 aa5.94□□□□□ -1.46
PRE3YJL001W CTF8P38877 133 aa5.94□□□□□ -1.46
PRE3YJL001W MNL1P38888 796 aa5.94□□□□□ -1.46
PRE3YJL001W SEC9P40357 651 aa5.94□□□□□ -1.46
PRE3YJL001W SDP1P40479 209 aa5.94□□□□□ -1.46
PRE3YJL001W SEC24P40482 926 aaKnown RBP5.94□□□□□ -1.46
PRE3YJL001W SSY5P47002 699 aa5.94□□□□□ -1.46
PRE3YJL001W PLB2Q03674 706 aa5.94□□□□□ -1.46
PRE3YJL001W YET2Q04210 160 aa5.94□□□□□ -1.46
PRE3YJL001W YPR022CQ12139 1133 aa5.94□□□□□ -1.46
PRE3YJL001W YDL177CQ12257 170 aa5.94□□□□□ -1.46
PRE3YJL001W RMP1Q12530 201 aa5.94□□□□□ -1.46
PRE3YJL001W CDC26P14724 124 aa5.93□□□□□ -1.46
PRE3YJL001W CLB1P24868 471 aa5.93□□□□□ -1.46
PRE3YJL001W NAM9P27929 486 aa5.93□□□□□ -1.46
PRE3YJL001W URA10P30402 227 aa5.93□□□□□ -1.46
PRE3YJL001W SRB5P32585 307 aa5.93□□□□□ -1.46
PRE3YJL001W UGP1P32861 499 aaKnown RBP5.93□□□□□ -1.46
PRE3YJL001W CAB3P36076 571 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms