RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C GPI1P53306 609 aa2.43□□□□□ -2.02
TPM2YIL138C JJJ1P53863 590 aa2.43□□□□□ -2.02
TPM2YIL138C SLD5Q03406 294 aa2.43□□□□□ -2.02
TPM2YIL138C SPC19Q03954 165 aa2.43□□□□□ -2.02
TPM2YIL138C PHO92Q06390 306 aa2.43□□□□□ -2.02
TPM2YIL138C MHR1Q06630 226 aa2.43□□□□□ -2.02
TPM2YIL138C GRX6Q12438 231 aa2.43□□□□□ -2.02
TPM2YIL138C BRR1Q99177 341 aaPredicted RBP2.43□□□□□ -2.02
TPM2YIL138C CLB3P24870 427 aa2.42□□□□□ -2.02
TPM2YIL138C AFG1P32317 509 aa2.42□□□□□ -2.02
TPM2YIL138C UTR4P32626 227 aa2.42□□□□□ -2.02
TPM2YIL138C GPD2P41911 440 aaKnown RBP2.42□□□□□ -2.02
TPM2YIL138C YGR210CP42942 411 aa2.42□□□□□ -2.02
TPM2YIL138C MNP1P53163 194 aaPredicted RBP2.42□□□□□ -2.02
TPM2YIL138C RLI1Q03195 608 aaKnown RBP2.42□□□□□ -2.02
TPM2YIL138C RQC1Q05468 723 aaKnown RBP2.42□□□□□ -2.02
TPM2YIL138C TMC1Q08422 150 aaPredicted RBP2.42□□□□□ -2.02
TPM2YIL138C CFT2Q12102 859 aaPredicted RBP2.42□□□□□ -2.02
TPM2YIL138C YDL009CQ12210 107 aa2.42□□□□□ -2.02
TPM2YIL138C LSP1Q12230 341 aaKnown RBP2.42□□□□□ -2.02
TPM2YIL138C SCM3Q12334 223 aa2.42□□□□□ -2.02
TPM2YIL138C SFI1Q12369 946 aa2.42□□□□□ -2.02
TPM2YIL138C YER078W-AQ3E7A2 54 aa2.42□□□□□ -2.02
TPM2YIL138C YRF1-4O13559 1382 aa2.41□□□□□ -2.02
TPM2YIL138C SUC2P00724 532 aa2.41□□□□□ -2.02
TPM2YIL138C EXO70P19658 623 aa2.41□□□□□ -2.02
TPM2YIL138C PPH22P23595 377 aa2.41□□□□□ -2.02
TPM2YIL138C YCR007CP25354 239 aa2.41□□□□□ -2.02
TPM2YIL138C IDH2P28241 369 aaKnown RBP2.41□□□□□ -2.02
TPM2YIL138C RAD14P28519 371 aa2.41□□□□□ -2.02
TPM2YIL138C DEG1P31115 442 aaKnown RBP2.41□□□□□ -2.02
TPM2YIL138C ERG3P32353 365 aa2.41□□□□□ -2.02
TPM2YIL138C PAD1P33751 242 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
TPM2YIL138C SAS3P34218 831 aa2.41□□□□□ -2.02
TPM2YIL138C CBP4P37267 147 aa2.41□□□□□ -2.02
TPM2YIL138C VTC2P43585 828 aa2.41□□□□□ -2.02
TPM2YIL138C YGR149WP48236 432 aa2.41□□□□□ -2.02
TPM2YIL138C OCA1P50946 238 aaPredicted RBP2.41□□□□□ -2.02
TPM2YIL138C YGL108CP53139 140 aa2.41□□□□□ -2.02
TPM2YIL138C YMR155WQ03795 547 aa2.41□□□□□ -2.02
TPM2YIL138C MRPL51Q06090 140 aaPredicted RBP2.41□□□□□ -2.02
TPM2YIL138C SYO1Q07395 620 aa2.41□□□□□ -2.02
TPM2YIL138C YOR387CQ08910 206 aa2.41□□□□□ -2.02
TPM2YIL138C HIR3P47171 1648 aa2.41□□□□□ -2.02
TPM2YIL138C AMD1P15274 810 aaKnown RBP2.4□□□□□ -2.03
TPM2YIL138C PUT3P25502 979 aaPredicted RBP2.4□□□□□ -2.03
TPM2YIL138C SPB1P25582 841 aaPredicted RBP2.4□□□□□ -2.03
TPM2YIL138C ATP11P32453 318 aa2.4□□□□□ -2.03
TPM2YIL138C SEC66P33754 206 aa2.4□□□□□ -2.03
TPM2YIL138C BYE1P36106 594 aa2.4□□□□□ -2.03
TPM2YIL138C KEL1P38853 1164 aaKnown RBP2.4□□□□□ -2.03
TPM2YIL138C SHO1P40073 367 aa2.4□□□□□ -2.03
TPM2YIL138C ALG8P40351 577 aa2.4□□□□□ -2.03
TPM2YIL138C ELP2P42935 788 aa2.4□□□□□ -2.03
TPM2YIL138C YLR152CP54072 576 aa2.4□□□□□ -2.03
TPM2YIL138C IRC15Q02733 499 aa2.4□□□□□ -2.03
TPM2YIL138C RBS1Q05672 457 aaKnown RBP2.4□□□□□ -2.03
TPM2YIL138C VTA1Q06263 330 aa2.4□□□□□ -2.03
TPM2YIL138C YOL159C-AQ3E769 90 aa2.4□□□□□ -2.03
TPM2YIL138C XRN1P22147 1528 aaKnown RBP2.39□□□□□ -2.03
TPM2YIL138C RHO2P06781 192 aa2.39□□□□□ -2.03
TPM2YIL138C LPD1P09624 499 aaKnown RBP2.39□□□□□ -2.03
TPM2YIL138C SPS4P09937 338 aa2.39□□□□□ -2.03
TPM2YIL138C SRV2P17555 526 aaKnown RBP2.39□□□□□ -2.03
TPM2YIL138C GLK1P17709 500 aaKnown RBP2.39□□□□□ -2.03
TPM2YIL138C ISY1P21374 235 aaPredicted RBP2.39□□□□□ -2.03
TPM2YIL138C REC107P21651 314 aa2.39□□□□□ -2.03
TPM2YIL138C NAM9P27929 486 aa2.39□□□□□ -2.03
TPM2YIL138C FUN19P28003 413 aaPredicted RBP2.39□□□□□ -2.03
TPM2YIL138C HXT3P32466 567 aaKnown RBP2.39□□□□□ -2.03
TPM2YIL138C NPL6P32832 435 aa2.39□□□□□ -2.03
TPM2YIL138C YBL059WP34224 193 aa2.39□□□□□ -2.03
TPM2YIL138C HCS1P34243 683 aa2.39□□□□□ -2.03
TPM2YIL138C MPE1P35728 441 aaKnown RBP2.39□□□□□ -2.03
TPM2YIL138C SYG1P40528 902 aa2.39□□□□□ -2.03
TPM2YIL138C SSU1P41930 458 aa2.39□□□□□ -2.03
TPM2YIL138C URB2P47108 1174 aa2.39□□□□□ -2.03
TPM2YIL138C RMD9P53140 646 aaKnown RBP2.39□□□□□ -2.03
TPM2YIL138C WSC2P53832 503 aa2.39□□□□□ -2.03
TPM2YIL138C SLG1P54867 378 aa2.39□□□□□ -2.03
TPM2YIL138C BNA5Q05979 453 aa2.39□□□□□ -2.03
TPM2YIL138C VPS74Q06385 345 aa2.39□□□□□ -2.03
TPM2YIL138C SIL1Q08199 421 aa2.39□□□□□ -2.03
TPM2YIL138C RKM5Q12367 367 aa2.39□□□□□ -2.03
TPM2YIL138C PGA3Q12746 312 aaKnown RBP2.39□□□□□ -2.03
TPM2YIL138C LEU4P06208 619 aaKnown RBP2.38□□□□□ -2.03
TPM2YIL138C ATP10P18496 279 aa2.38□□□□□ -2.03
TPM2YIL138C YIM1P28625 365 aa2.38□□□□□ -2.03
TPM2YIL138C REC114P32841 428 aa2.38□□□□□ -2.03
TPM2YIL138C NFU1P32860 256 aa2.38□□□□□ -2.03
TPM2YIL138C MFT1P33441 392 aaKnown RBP2.38□□□□□ -2.03
TPM2YIL138C RSM22P36056 628 aa2.38□□□□□ -2.03
TPM2YIL138C RFS1P38234 210 aaKnown RBP2.38□□□□□ -2.03
TPM2YIL138C DLD2P46681 530 aaKnown RBP2.38□□□□□ -2.03
TPM2YIL138C RPA49Q01080 415 aaPredicted RBP2.38□□□□□ -2.03
TPM2YIL138C GIR2Q03768 265 aaPredicted RBP2.38□□□□□ -2.03
TPM2YIL138C TAP42Q04372 366 aa2.38□□□□□ -2.03
TPM2YIL138C RRN11Q04712 507 aa2.38□□□□□ -2.03
TPM2YIL138C SIN3P22579 1536 aa2.37□□□□□ -2.03
TPM2YIL138C HHF1P02309 103 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms