RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C CCT6P39079 546 aa4.05□□□□□ -1.76
SDS3YIL084C YIL152WP40455 235 aa4.05□□□□□ -1.76
SDS3YIL084C RTS2P40962 232 aa4.05□□□□□ -1.76
SDS3YIL084C APT1P49435 187 aaKnown RBP4.05□□□□□ -1.76
SDS3YIL084C RBG2P53295 368 aaKnown RBP4.05□□□□□ -1.76
SDS3YIL084C VPS75P53853 264 aa4.05□□□□□ -1.76
SDS3YIL084C BET4Q00618 327 aa4.05□□□□□ -1.76
SDS3YIL084C YMR160WQ03823 816 aa4.05□□□□□ -1.76
SDS3YIL084C YMR254CQ04838 102 aa4.05□□□□□ -1.76
SDS3YIL084C MFB1Q04922 465 aa4.05□□□□□ -1.76
SDS3YIL084C RSF1Q05043 376 aa4.05□□□□□ -1.76
SDS3YIL084C SDH5Q08230 162 aa4.05□□□□□ -1.76
SDS3YIL084C RPS10AQ08745 105 aaPredicted RBP4.05□□□□□ -1.76
SDS3YIL084C ADE4P04046 510 aaKnown RBP4.04□□□□□ -1.76
SDS3YIL084C SNC1P31109 117 aa4.04□□□□□ -1.76
SDS3YIL084C TVP38P36164 337 aa4.04□□□□□ -1.76
SDS3YIL084C RPL32P38061 130 aaKnown RBP4.04□□□□□ -1.76
SDS3YIL084C RKM3P38222 552 aa4.04□□□□□ -1.76
SDS3YIL084C ARC40P38328 384 aaKnown RBP4.04□□□□□ -1.76
SDS3YIL084C CIN4P39110 191 aa4.04□□□□□ -1.76
SDS3YIL084C ARF3P40994 183 aaRIP-Chip data4.04□□□□□ -1.76not detected
SDS3YIL084C RPS10BP46784 105 aaKnown RBP4.04□□□□□ -1.76
SDS3YIL084C PYK2P52489 506 aaKnown RBP4.04□□□□□ -1.76
SDS3YIL084C MDM1Q01846 1127 aa4.04□□□□□ -1.76
SDS3YIL084C YDR415CQ04033 374 aaPredicted RBP4.04□□□□□ -1.76
SDS3YIL084C SSK1Q07084 712 aa4.04□□□□□ -1.76
SDS3YIL084C SRL1Q08673 210 aa4.04□□□□□ -1.76
SDS3YIL084C BUD7Q08754 746 aa4.04□□□□□ -1.76
SDS3YIL084C ARP6Q12509 438 aa4.04□□□□□ -1.76
SDS3YIL084C INH1P01097 85 aa4.03□□□□□ -1.76
SDS3YIL084C DFR1P07807 211 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
SDS3YIL084C YFL068WP0CX99 160 aa4.03□□□□□ -1.76
SDS3YIL084C YLL066W-AP0CY00 160 aa4.03□□□□□ -1.76
SDS3YIL084C YLL067W-AP0CY01 160 aa4.03□□□□□ -1.76
SDS3YIL084C ART10P18634 518 aaKnown RBP4.03□□□□□ -1.76
SDS3YIL084C MGR1P25573 417 aa4.03□□□□□ -1.76
SDS3YIL084C LAG1P38703 411 aa4.03□□□□□ -1.76
SDS3YIL084C PES4P39684 611 aa4.03□□□□□ -1.76
SDS3YIL084C NDE1P40215 560 aa4.03□□□□□ -1.76
SDS3YIL084C YIL169CP40442 995 aa4.03□□□□□ -1.76
SDS3YIL084C ESL1P40456 1118 aa4.03□□□□□ -1.76
SDS3YIL084C PKP2P53170 491 aa4.03□□□□□ -1.76
SDS3YIL084C ARE2P53629 642 aaKnown RBP4.03□□□□□ -1.76
SDS3YIL084C DUG3P53871 357 aa4.03□□□□□ -1.76
SDS3YIL084C IPI3P53877 555 aa4.03□□□□□ -1.76
SDS3YIL084C NUP100Q02629 959 aa4.03□□□□□ -1.76
SDS3YIL084C VPS38Q05919 439 aa4.03□□□□□ -1.76
SDS3YIL084C YLR352WQ06479 807 aa4.03□□□□□ -1.76
SDS3YIL084C AVL9Q12500 764 aa4.03□□□□□ -1.76
SDS3YIL084C PGA3Q12746 312 aaKnown RBP4.03□□□□□ -1.76
SDS3YIL084C PDA1P16387 420 aaKnown RBP4.02□□□□□ -1.77
SDS3YIL084C MAK31P23059 88 aa4.02□□□□□ -1.77
SDS3YIL084C MTR2P34232 184 aaKnown RBP4.02□□□□□ -1.77
SDS3YIL084C MIC60P36112 540 aa4.02□□□□□ -1.77
SDS3YIL084C RRP3P38712 501 aaKnown RBP4.02□□□□□ -1.77
SDS3YIL084C OSH3P38713 996 aaKnown RBP4.02□□□□□ -1.77
SDS3YIL084C YHL026CP38740 315 aa4.02□□□□□ -1.77
SDS3YIL084C MET30P39014 640 aa4.02□□□□□ -1.77
SDS3YIL084C HMF1P40037 129 aaKnown RBP4.02□□□□□ -1.77
SDS3YIL084C IMD4P50094 524 aaKnown RBP4.02□□□□□ -1.77
SDS3YIL084C ALT2P52892 507 aa4.02□□□□□ -1.77
SDS3YIL084C HOS2P53096 452 aaPredicted RBP4.02□□□□□ -1.77
SDS3YIL084C YGR126WP53274 230 aa4.02□□□□□ -1.77
SDS3YIL084C LSC1P53598 329 aaKnown RBP4.02□□□□□ -1.77
SDS3YIL084C YNL134CP53912 376 aaKnown RBP4.02□□□□□ -1.77
SDS3YIL084C TIM10P87108 93 aa4.02□□□□□ -1.77
SDS3YIL084C DIG1Q03063 452 aaKnown RBP4.02□□□□□ -1.77
SDS3YIL084C NUP53Q03790 475 aa4.02□□□□□ -1.77
SDS3YIL084C FIN1Q03898 291 aa4.02□□□□□ -1.77
SDS3YIL084C MYO5Q04439 1219 aaKnown RBP4.02□□□□□ -1.77
SDS3YIL084C TDA9Q04545 1251 aa4.02□□□□□ -1.77
SDS3YIL084C MRP13P12686 339 aa4.01□□□□□ -1.77
SDS3YIL084C YCR043CP25361 127 aa4.01□□□□□ -1.77
SDS3YIL084C TIF3P34167 436 aaKnown RBP4.01□□□□□ -1.77
SDS3YIL084C PHD1P36093 366 aa4.01□□□□□ -1.77
SDS3YIL084C TCD2P36101 447 aaKnown RBP4.01□□□□□ -1.77
SDS3YIL084C YKL023WP36103 277 aaKnown RBP4.01□□□□□ -1.77
SDS3YIL084C SRO77P38163 1010 aa4.01□□□□□ -1.77
SDS3YIL084C UTP9P38882 575 aaKnown RBP4.01□□□□□ -1.77
SDS3YIL084C TES1P41903 349 aaKnown RBP4.01□□□□□ -1.77
SDS3YIL084C SNG1P46950 547 aa4.01□□□□□ -1.77
SDS3YIL084C SMM1P53720 384 aaKnown RBP4.01□□□□□ -1.77
SDS3YIL084C SMD2Q06217 110 aaKnown RBP4.01□□□□□ -1.77
SDS3YIL084C APL5Q08951 932 aaKnown RBP4.01□□□□□ -1.77
SDS3YIL084C PKH2Q12236 1081 aaKnown RBP4.01□□□□□ -1.77
SDS3YIL084C FOB1O13329 566 aa4□□□□□ -1.77
SDS3YIL084C GAL80P04387 435 aa4□□□□□ -1.77
SDS3YIL084C RPS14AP06367 137 aaKnown RBP4□□□□□ -1.77
SDS3YIL084C OPI1P21957 404 aa4□□□□□ -1.77
SDS3YIL084C RPN2P32565 945 aaKnown RBP4□□□□□ -1.77
SDS3YIL084C JNM1P36224 373 aa4□□□□□ -1.77
SDS3YIL084C EFM2P38347 419 aa4□□□□□ -1.77
SDS3YIL084C MED6P38782 295 aa4□□□□□ -1.77
SDS3YIL084C RPS14BP39516 138 aaKnown RBP4□□□□□ -1.77
SDS3YIL084C MMF1P40185 145 aaKnown RBP4□□□□□ -1.77
SDS3YIL084C LAM5P43560 674 aa4□□□□□ -1.77
SDS3YIL084C FET5P43561 622 aa4□□□□□ -1.77
SDS3YIL084C ZPR1P53303 486 aaKnown RBP4□□□□□ -1.77
SDS3YIL084C SHR3Q02774 210 aa4□□□□□ -1.77
SDS3YIL084C FMP42Q04991 504 aa4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms