RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W TIM9O74700 87 aa3.59□□□□□ -1.83
SPT6YGR116W CDC4P07834 779 aa3.59□□□□□ -1.83
SPT6YGR116W HSP26P15992 214 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
SPT6YGR116W SAT4P25333 603 aaKnown RBP3.59□□□□□ -1.83
SPT6YGR116W MCR1P36060 302 aaKnown RBP3.59□□□□□ -1.83
SPT6YGR116W YBR063CP38083 404 aa3.59□□□□□ -1.83
SPT6YGR116W BPL1P48445 690 aaPredicted RBP3.59□□□□□ -1.83
SPT6YGR116W YAF9P53930 226 aa3.59□□□□□ -1.83
SPT6YGR116W YPL119C-AQ3E751 87 aa3.59□□□□□ -1.83
SPT6YGR116W RAS2P01120 322 aaKnown RBP3.59□□□□□ -1.84
SPT6YGR116W APE1P14904 514 aa3.59□□□□□ -1.84
SPT6YGR116W MRPL33P20084 86 aa3.59□□□□□ -1.84
SPT6YGR116W PER1P25625 357 aa3.59□□□□□ -1.84
SPT6YGR116W SCD5P34758 872 aa3.59□□□□□ -1.84
SPT6YGR116W GLY1P37303 387 aaKnown RBP3.59□□□□□ -1.84
SPT6YGR116W PCL6P40038 420 aa3.59□□□□□ -1.84
SPT6YGR116W LSM5P40089 93 aaKnown RBP3.59□□□□□ -1.84
SPT6YGR116W ESL1P40456 1118 aa3.59□□□□□ -1.84
SPT6YGR116W ALR2P43553 858 aa3.59□□□□□ -1.84
SPT6YGR116W PFD1P46988 109 aa3.59□□□□□ -1.84
SPT6YGR116W YJL171CP46992 396 aa3.59□□□□□ -1.84
SPT6YGR116W TPO2P53283 614 aa3.59□□□□□ -1.84
SPT6YGR116W CAF40P53829 373 aa3.59□□□□□ -1.84
SPT6YGR116W TAF12Q03761 539 aa3.59□□□□□ -1.84
SPT6YGR116W YMR034CQ05131 434 aaPredicted RBP3.59□□□□□ -1.84
SPT6YGR116W GPN3Q06543 272 aa3.59□□□□□ -1.84
SPT6YGR116W BUD20Q08004 166 aaPredicted RBP3.59□□□□□ -1.84
SPT6YGR116W GAS5Q08193 484 aa3.59□□□□□ -1.84
SPT6YGR116W YOR238WQ08634 303 aa3.59□□□□□ -1.84
SPT6YGR116W TFB4Q12004 338 aa3.59□□□□□ -1.84
SPT6YGR116W UBX3Q12229 455 aa3.59□□□□□ -1.84
SPT6YGR116W YDL199CQ12407 687 aa3.59□□□□□ -1.84
SPT6YGR116W RTN2Q12443 393 aa3.59□□□□□ -1.84
SPT6YGR116W SAM1P10659 382 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W ERG9P29704 444 aa3.58□□□□□ -1.84
SPT6YGR116W ARO7P32178 256 aa3.58□□□□□ -1.84
SPT6YGR116W BIO2P32451 375 aa3.58□□□□□ -1.84
SPT6YGR116W YHR131CP38835 850 aa3.58□□□□□ -1.84
SPT6YGR116W YHR202WP38887 602 aa3.58□□□□□ -1.84
SPT6YGR116W ACA1P39970 489 aa3.58□□□□□ -1.84
SPT6YGR116W TED1P40533 473 aa3.58□□□□□ -1.84
SPT6YGR116W FKH2P41813 862 aa3.58□□□□□ -1.84
SPT6YGR116W LSM8P47093 109 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W MNP1P53163 194 aaPredicted RBP3.58□□□□□ -1.84
SPT6YGR116W JAC1P53193 184 aa3.58□□□□□ -1.84
SPT6YGR116W SPC98P53540 846 aa3.58□□□□□ -1.84
SPT6YGR116W CAF120P53836 1060 aa3.58□□□□□ -1.84
SPT6YGR116W MRPS16Q02608 121 aa3.58□□□□□ -1.84
SPT6YGR116W NGL2Q03264 515 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W ECM11Q04110 302 aa3.58□□□□□ -1.84
SPT6YGR116W DIS3Q08162 1001 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W SLF1Q12034 447 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W YOR022CQ12204 715 aa3.58□□□□□ -1.84
SPT6YGR116W ATP4P05626 244 aa3.58□□□□□ -1.84
SPT6YGR116W RSM22P36056 628 aa3.58□□□□□ -1.84
SPT6YGR116W DMA1P38823 416 aa3.58□□□□□ -1.84
SPT6YGR116W RSP5P39940 809 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W YMR144WP40214 342 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W LSM7P53905 115 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W PRM15Q03262 622 aa3.58□□□□□ -1.84
SPT6YGR116W TRS31Q03337 283 aa3.58□□□□□ -1.84
SPT6YGR116W YHC1Q05900 231 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
SPT6YGR116W MED4Q12343 284 aa3.58□□□□□ -1.84
SPT6YGR116W WTM1Q12363 437 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W HTA2P04912 132 aa3.58□□□□□ -1.84
SPT6YGR116W RPP1AP05318 106 aaPredicted RBP3.58□□□□□ -1.84
SPT6YGR116W STE3P06783 470 aa3.58□□□□□ -1.84
SPT6YGR116W PRI2P20457 528 aa3.58□□□□□ -1.84
SPT6YGR116W MAG1P22134 296 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W FPS1P23900 669 aa3.58□□□□□ -1.84
SPT6YGR116W RNP1P32385 249 aa3.58□□□□□ -1.84
SPT6YGR116W CBT1P36038 271 aaPredicted RBP3.58□□□□□ -1.84
SPT6YGR116W NPR2P39923 615 aa3.58□□□□□ -1.84
SPT6YGR116W COG3P40094 801 aa3.58□□□□□ -1.84
SPT6YGR116W SSN8P47821 323 aa3.58□□□□□ -1.84
SPT6YGR116W YGR067CP53243 804 aa3.58□□□□□ -1.84
SPT6YGR116W REG1Q00816 1014 aa3.58□□□□□ -1.84
SPT6YGR116W YMR130WQ04223 302 aa3.58□□□□□ -1.84
SPT6YGR116W YLR224WQ05947 369 aa3.58□□□□□ -1.84
SPT6YGR116W BLS1Q06071 122 aa3.58□□□□□ -1.84
SPT6YGR116W ARG81P05085 880 aa3.58□□□□□ -1.84
SPT6YGR116W PEP4P07267 405 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W ALG7P07286 448 aa3.58□□□□□ -1.84
SPT6YGR116W SPS2P08459 502 aa3.58□□□□□ -1.84
SPT6YGR116W ARE1P25628 610 aa3.58□□□□□ -1.84
SPT6YGR116W AAR2P32357 355 aaPredicted RBP3.58□□□□□ -1.84
SPT6YGR116W STE5P32917 917 aa3.58□□□□□ -1.84
SPT6YGR116W RPS1AP33442 255 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W CPR5P35176 225 aa3.58□□□□□ -1.84
SPT6YGR116W SNU114P36048 1008 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W SDH8P38345 138 aa3.58□□□□□ -1.84
SPT6YGR116W RCK1P38622 512 aa3.58□□□□□ -1.84
SPT6YGR116W SPO73P40031 143 aa3.58□□□□□ -1.84
SPT6YGR116W TIR3P40552 269 aa3.58□□□□□ -1.84
SPT6YGR116W ATG18P43601 500 aa3.58□□□□□ -1.84
SPT6YGR116W RPS10BP46784 105 aaKnown RBP3.58□□□□□ -1.84
SPT6YGR116W ZAP1P47043 880 aa3.58□□□□□ -1.84
SPT6YGR116W INA17Q02888 182 aa3.58□□□□□ -1.84
SPT6YGR116W SSY1Q03770 852 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms