RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XRN1	YGL173C	RSM28	Q03430	361 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	ATC1	Q04005	294 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	SPH1	Q06160	661 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	VPS36	Q06696	566 aa		3.19	□□□□□ -1.9
XRN1	YGL173C	CFT2	Q12102	859 aa	Predicted RBP	3.19	□□□□□ -1.9
XRN1	YGL173C	LYS2	P07702	1392 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	ARO3	P14843	370 aa	Known RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	PMI40	P29952	429 aa	Known RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	WHI3	P34761	661 aa	Known RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	JHD1	P40034	492 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	STE24	P47154	453 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	YGL138C	P53122	345 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	PRM1	P53835	661 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	SSL1	Q04673	461 aa	Predicted RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	SMC5	Q08204	1093 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	Q0142	Q9ZZW4	58 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	PDA1	P16387	420 aa	Known RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	RPT5	P33297	434 aa	Known RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	YBL055C	P34220	418 aa	Predicted RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	MRPL7	P36519	292 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	ZTA1	P38230	334 aa	Known RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	VBA2	P38358	474 aa	Known RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	WSS1	P38838	269 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	ELO1	P39540	310 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	MEF2	P39677	819 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	YIL089W	P40500	205 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	COQ6	P53318	479 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	AQR1	P53943	586 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	BET4	Q00618	327 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	PHO92	Q06390	306 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	FMP45	Q07651	309 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	RRT8	Q08219	342 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	MCH5	Q08777	521 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	SRO7	Q12038	1033 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	MDY2	Q12285	212 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	MDM20	Q12387	796 aa	Known RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	Q0010	Q9ZZX9	128 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	HXK2	P04807	486 aa	Known RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	PUT2	P07275	575 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	YCR007C	P25354	239 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	BOS1	P25385	244 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	MTR2	P34232	184 aa	Known RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	YHR033W	P38690	423 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	SKN7	P38889	622 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	SUR2	P38992	349 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	YTA12	P40341	825 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	YML037C	Q03703	340 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	GFD1	Q04839	188 aa	Known RBP	3.18	□□□□□ -1.9
XRN1	YGL173C	ALE1	Q08548	619 aa		3.18	□□□□□ -1.9
XRN1	YGL173C	CMP2	P14747	604 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	BCS1	P32839	456 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	PPQ1	P32945	549 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	RPC25	P35718	212 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	DUG2	P38149	878 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	YFL054C	P43549	646 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	GCD14	P46959	383 aa	Predicted RBP	3.17	□□□□□ -1.9
XRN1	YGL173C	AZR1	P50080	613 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	YGL036W	P53185	909 aa	Predicted RBP	3.17	□□□□□ -1.9
XRN1	YGL173C	MDR1	P53258	950 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	CYK3	Q07533	885 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	SGO1	Q08490	590 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	WHI2	P12611	486 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	GRR1	P24814	1151 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	ACB1	P31787	87 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	SHP1	P34223	423 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	PHO90	P39535	881 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	YER085C	P40058	173 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	SCC4	P40090	624 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	OSW5	P40219	148 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	PYK2	P52489	506 aa	Known RBP	3.17	□□□□□ -1.9
XRN1	YGL173C	HEF3	P53978	1044 aa	Known RBP	3.17	□□□□□ -1.9
XRN1	YGL173C	YMR130W	Q04223	302 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	STE23	Q06010	1027 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	VAC14	Q06708	880 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	RPL31B	P0C2H9	113 aa	Known RBP	3.17	□□□□□ -1.9
XRN1	YGL173C	HPR1	P17629	752 aa	Known RBP	3.17	□□□□□ -1.9
XRN1	YGL173C	DPH2	P32461	534 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	PMT1	P33775	817 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	UBA4	P38820	440 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	KIN4	Q01919	800 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	MDM30	Q05930	598 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	YLR278C	Q05854	1341 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	TSA1	P34760	196 aa	Known RBP	3.17	□□□□□ -1.9
XRN1	YGL173C	YBR139W	P38109	508 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	TIF5	P38431	405 aa	Known RBP	3.17	□□□□□ -1.9
XRN1	YGL173C	MSR1	P38714	643 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	SEC24	P40482	926 aa	Known RBP	3.17	□□□□□ -1.9
XRN1	YGL173C	LSC1	P53598	329 aa	Known RBP	3.17	□□□□□ -1.9
XRN1	YGL173C	UFO1	Q04511	668 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	CRR1	Q05790	422 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	ATG34	Q12292	412 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	RAD61	Q99359	647 aa		3.17	□□□□□ -1.9
XRN1	YGL173C	COX2	P00410	251 aa		3.16	□□□□□ -1.9
XRN1	YGL173C	MVD1	P32377	396 aa	Known RBP	3.16	□□□□□ -1.9
XRN1	YGL173C	KAE1	P36132	386 aa		3.16	□□□□□ -1.9
XRN1	YGL173C	RPP1	P38786	293 aa		3.16	□□□□□ -1.9
XRN1	YGL173C	LCB2	P40970	561 aa		3.16	□□□□□ -1.9
XRN1	YGL173C	LYS20	P48570	428 aa	Known RBP	3.16	□□□□□ -1.9
XRN1	YGL173C	YGL108C	P53139	140 aa		3.16	□□□□□ -1.9
XRN1	YGL173C	SSY1	Q03770	852 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms