RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W STE12P13574 688 aa4.43□□□□□ -1.7
SPT3YDR392W ISY1P21374 235 aaPredicted RBP4.43□□□□□ -1.7
SPT3YDR392W PTC6P25646 442 aa4.43□□□□□ -1.7
SPT3YDR392W FUI1P38196 639 aa4.43□□□□□ -1.7
SPT3YDR392W TDA3P38758 523 aa4.43□□□□□ -1.7
SPT3YDR392W BNA2P47125 453 aa4.43□□□□□ -1.7
SPT3YDR392W ASN2P49090 572 aaKnown RBP4.43□□□□□ -1.7
SPT3YDR392W PDR16P53860 351 aaKnown RBP4.43□□□□□ -1.7
SPT3YDR392W REC102Q02721 264 aa4.43□□□□□ -1.7
SPT3YDR392W CIA1Q05583 330 aa4.43□□□□□ -1.7
SPT3YDR392W MLH2Q07980 695 aa4.43□□□□□ -1.7
SPT3YDR392W THI20Q08224 551 aa4.43□□□□□ -1.7
SPT3YDR392W YRM1Q12340 786 aa4.43□□□□□ -1.7
SPT3YDR392W ECM3Q99252 613 aa4.43□□□□□ -1.7
SPT3YDR392W DET1Q99288 334 aaKnown RBP4.43□□□□□ -1.7
SPT3YDR392W Q0010Q9ZZX9 128 aa4.43□□□□□ -1.7
SPT3YDR392W FLO9P39712 1322 aa4.43□□□□□ -1.7
SPT3YDR392W HEM2P05373 342 aa4.42□□□□□ -1.7
SPT3YDR392W VPS1P21576 704 aaKnown RBP4.42□□□□□ -1.7
SPT3YDR392W ERG9P29704 444 aa4.42□□□□□ -1.7
SPT3YDR392W SRB5P32585 307 aa4.42□□□□□ -1.7
SPT3YDR392W MUP3P38734 546 aa4.42□□□□□ -1.7
SPT3YDR392W ECM14P38836 430 aa4.42□□□□□ -1.7
SPT3YDR392W RSP5P39940 809 aaKnown RBP4.42□□□□□ -1.7
SPT3YDR392W YJL107CP42947 387 aa4.42□□□□□ -1.7
SPT3YDR392W YMR034CQ05131 434 aaPredicted RBP4.42□□□□□ -1.7
SPT3YDR392W COG4Q06096 861 aa4.42□□□□□ -1.7
SPT3YDR392W GAS2Q06135 555 aa4.42□□□□□ -1.7
SPT3YDR392W SLH1P53327 1967 aaKnown RBP4.42□□□□□ -1.7
SPT3YDR392W ALG1P16661 449 aa4.41□□□□□ -1.7
SPT3YDR392W RPI1P23250 407 aaKnown RBP4.41□□□□□ -1.7
SPT3YDR392W YSR3P23501 404 aa4.41□□□□□ -1.7
SPT3YDR392W BUB3P26449 341 aa4.41□□□□□ -1.7
SPT3YDR392W YBR062CP38239 180 aa4.41□□□□□ -1.7
SPT3YDR392W EHT1P38295 451 aa4.41□□□□□ -1.7
SPT3YDR392W YEL073CP39974 107 aa4.41□□□□□ -1.7
SPT3YDR392W CPR7P47103 393 aa4.41□□□□□ -1.7
SPT3YDR392W RTA1P53047 317 aa4.41□□□□□ -1.7
SPT3YDR392W GIS2P53849 153 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SPT3YDR392W OSW1Q08692 278 aa4.41□□□□□ -1.7
SPT3YDR392W NBL1Q3E7Y6 73 aa4.41□□□□□ -1.7
SPT3YDR392W HSH49Q99181 213 aaPredicted RBP4.41□□□□□ -1.7
SPT3YDR392W PCT1P13259 424 aa4.4□□□□□ -1.71
SPT3YDR392W APA1P16550 321 aaKnown RBP4.4□□□□□ -1.71
SPT3YDR392W THR1P17423 357 aaKnown RBP4.4□□□□□ -1.71
SPT3YDR392W GLK1P17709 500 aaKnown RBP4.4□□□□□ -1.71
SPT3YDR392W RPA135P22138 1203 aaKnown RBP4.4□□□□□ -1.71
SPT3YDR392W SPS19P32573 292 aaKnown RBP4.4□□□□□ -1.71
SPT3YDR392W SFC1P33303 322 aa4.4□□□□□ -1.71
SPT3YDR392W YKL187CP34231 750 aa4.4□□□□□ -1.71
SPT3YDR392W HSL7P38274 827 aa4.4□□□□□ -1.71
SPT3YDR392W YHL041WP38730 149 aa4.4□□□□□ -1.71
SPT3YDR392W FSH1P38777 243 aaKnown RBP4.4□□□□□ -1.71
SPT3YDR392W PRM9P39551 298 aa4.4□□□□□ -1.71
SPT3YDR392W YIL152WP40455 235 aa4.4□□□□□ -1.71
SPT3YDR392W ECO1P43605 281 aa4.4□□□□□ -1.71
SPT3YDR392W NMD5P46970 1048 aa4.4□□□□□ -1.71
SPT3YDR392W RTC4P53850 401 aa4.4□□□□□ -1.71
SPT3YDR392W VAM6Q07468 1049 aa4.4□□□□□ -1.71
SPT3YDR392W USV1Q12132 391 aa4.4□□□□□ -1.71
SPT3YDR392W TYR1P20049 452 aa4.39□□□□□ -1.71
SPT3YDR392W DBP8P38719 431 aa4.39□□□□□ -1.71
SPT3YDR392W SPO73P40031 143 aa4.39□□□□□ -1.71
SPT3YDR392W NBP1P52919 319 aaPredicted RBP4.39□□□□□ -1.71
SPT3YDR392W RCO1Q04779 684 aa4.39□□□□□ -1.71
SPT3YDR392W RLP24Q07915 199 aaKnown RBP4.39□□□□□ -1.71
SPT3YDR392W DIA2Q08496 732 aaPredicted RBP4.39□□□□□ -1.71
SPT3YDR392W SMF3Q12078 473 aaPredicted RBP4.39□□□□□ -1.71
SPT3YDR392W YLR149CQ99296 730 aa4.39□□□□□ -1.71
SPT3YDR392W PGI1P12709 554 aaKnown RBP4.38□□□□□ -1.71
SPT3YDR392W AAT2P23542 418 aaKnown RBP4.38□□□□□ -1.71
SPT3YDR392W MTC2P34246 357 aa4.38□□□□□ -1.71
SPT3YDR392W RPS27AP35997 82 aaKnown RBP4.38□□□□□ -1.71
SPT3YDR392W PSY4P38193 441 aa4.38□□□□□ -1.71
SPT3YDR392W RPS27BP38711 82 aa4.38□□□□□ -1.71
SPT3YDR392W PEX31P53203 462 aa4.38□□□□□ -1.71
SPT3YDR392W CCE1Q03702 353 aa4.38□□□□□ -1.71
SPT3YDR392W TAF12Q03761 539 aa4.38□□□□□ -1.71
SPT3YDR392W MTQ2Q03920 221 aaPredicted RBP4.38□□□□□ -1.71
SPT3YDR392W HMO1Q03973 246 aaKnown RBP4.38□□□□□ -1.71
SPT3YDR392W CMS1Q07897 291 aaKnown RBP4.38□□□□□ -1.71
SPT3YDR392W RBK1P25332 333 aa4.37□□□□□ -1.71
SPT3YDR392W MXR2P25566 168 aa4.37□□□□□ -1.71
SPT3YDR392W GET2P40056 285 aa4.37□□□□□ -1.71
SPT3YDR392W VPS27P40343 622 aaKnown RBP4.37□□□□□ -1.71
SPT3YDR392W ERG13P54839 491 aaKnown RBP4.37□□□□□ -1.71
SPT3YDR392W ATG21Q02887 496 aa4.37□□□□□ -1.71
SPT3YDR392W YOL075CQ08234 1294 aa4.37□□□□□ -1.71
SPT3YDR392W ERG11P10614 530 aa4.36□□□□□ -1.71
SPT3YDR392W ACO1P19414 778 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
SPT3YDR392W PRP28P23394 588 aa4.36□□□□□ -1.71
SPT3YDR392W MRPS5P33759 307 aa4.36□□□□□ -1.71
SPT3YDR392W DHR2P36009 735 aaPredicted RBP4.36□□□□□ -1.71
SPT3YDR392W SET3P36124 751 aa4.36□□□□□ -1.71
SPT3YDR392W YMR262WP38430 313 aa4.36□□□□□ -1.71
SPT3YDR392W YHL044WP38727 235 aa4.36□□□□□ -1.71
SPT3YDR392W MNL1P38888 796 aa4.36□□□□□ -1.71
SPT3YDR392W DLD2P46681 530 aaKnown RBP4.36□□□□□ -1.71
SPT3YDR392W YGR151CP53287 111 aa4.36□□□□□ -1.71
SPT3YDR392W PPM1Q04081 328 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms