RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	SPT20	P50875	604 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	DIA3	P52290	468 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	PXR1	P53335	271 aa	Predicted RBP	5.74	□□□□□ -1.49
CHL4	YDR254W	BOP3	P53958	396 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	SKO1	Q02100	647 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	TRS31	Q03337	283 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	CAB5	Q03941	241 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	YMR226C	Q05016	267 aa	Known RBP	5.74	□□□□□ -1.49
CHL4	YDR254W	NCB2	Q92317	146 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	MDS3	P53094	1487 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	GPH1	P06738	902 aa	Known RBP	5.73	□□□□□ -1.49
CHL4	YDR254W	PDE2	P06776	526 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	CDC21	P06785	304 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	URA4	P20051	364 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	SAR1	P20606	190 aa	Known RBP	5.73	□□□□□ -1.49
CHL4	YDR254W	RHB1	P25378	209 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	WBP1	P33767	430 aa	Known RBP	5.73	□□□□□ -1.49
CHL4	YDR254W	HIT1	P46973	164 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	LSM1	P47017	172 aa	Known RBP	5.73	□□□□□ -1.49
CHL4	YDR254W	BIT61	P47041	543 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	TAM41	P53230	385 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	SLI1	P53304	468 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	YPL108W	Q02872	168 aa	Predicted RBP	5.73	□□□□□ -1.49
CHL4	YDR254W	SRT1	Q03175	343 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	YDR132C	Q03900	495 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	YLR283W	Q05867	314 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	THI7	Q05998	598 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	RTT109	Q07794	436 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	YPL272C	Q08984	517 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
CHL4	YDR254W	INP53	Q12271	1107 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	ATG31	Q12421	196 aa		5.73	□□□□□ -1.49
CHL4	YDR254W	PNO1	Q99216	274 aa	Known RBP	5.73	□□□□□ -1.49
CHL4	YDR254W	RPL27A	P0C2H6	136 aa	Known RBP	5.72	□□□□□ -1.49
CHL4	YDR254W	RPL27B	P0C2H7	136 aa	Known RBP	5.72	□□□□□ -1.49
CHL4	YDR254W	RPL35A	P0CX84	120 aa	Known RBP	5.72	□□□□□ -1.49
CHL4	YDR254W	RPL35B	P0CX85	120 aa	Known RBP	5.72	□□□□□ -1.49
CHL4	YDR254W	MATALPHA2	P0CY08	210 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	HMLALPHA2	P0CY09	210 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	SEC12	P11655	471 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	WHI2	P12611	486 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	KRS1	P15180	591 aa	Known RBP	5.72	□□□□□ -1.49
CHL4	YDR254W	ZRC1	P20107	442 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	IME1	P21190	360 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	DAL2	P25335	343 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	PPA2	P28239	310 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	CWP1	P28319	239 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	TUL1	P36096	758 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	MIP6	P38760	659 aa	Known RBP	5.72	□□□□□ -1.49
CHL4	YDR254W	THO1	P40040	218 aa	Known RBP	5.72	□□□□□ -1.49
CHL4	YDR254W	YIL001W	P40560	513 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	IME4	P41833	600 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	SAD1	P43589	448 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	EAF7	P53911	425 aa	Known RBP	5.72	□□□□□ -1.49
CHL4	YDR254W	MRS2	Q01926	470 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	PRM15	Q03262	622 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	YMR130W	Q04223	302 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	MYO5	Q04439	1219 aa	Known RBP	5.72	□□□□□ -1.49
CHL4	YDR254W	RRP45	Q05636	305 aa	Known RBP	5.72	□□□□□ -1.49
CHL4	YDR254W	PIG1	Q06216	648 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	YPR078C	Q06813	372 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	AIM6	Q07716	390 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	SWI1	P09547	1314 aa		5.72	□□□□□ -1.49
CHL4	YDR254W	ILV2	P07342	687 aa	Known RBP	5.71	□□□□□ -1.5
CHL4	YDR254W	MATALPHA1	P0CY06	175 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	HMLALPHA1	P0CY07	175 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	PPH22	P23595	377 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	CIN8	P27895	1000 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	MTC7	P32633	139 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	NUF2	P33895	451 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	TCD2	P36101	447 aa	Known RBP	5.71	□□□□□ -1.5
CHL4	YDR254W	FHL1	P39521	936 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	ATM1	P40416	690 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	RSM25	P40496	264 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	ERG10	P41338	398 aa	Known RBP	5.71	□□□□□ -1.5
CHL4	YDR254W	SNX4	P47057	423 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	YIP5	P53108	310 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	YGL036W	P53185	909 aa	Predicted RBP	5.71	□□□□□ -1.5
CHL4	YDR254W	MRP51	Q02950	344 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	STP3	Q05937	343 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	RXT3	Q07458	294 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	YDL114W	Q07530	308 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	YLR040C	Q07988	224 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	REX4	Q08237	289 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	MED2	Q12124	431 aa		5.71	□□□□□ -1.5
CHL4	YDR254W	PMA1	P05030	918 aa	Known RBP	5.7	□□□□□ -1.5
CHL4	YDR254W	LEU4	P06208	619 aa	Known RBP	5.7	□□□□□ -1.5
CHL4	YDR254W	ARD1	P07347	238 aa	Predicted RBP	5.7	□□□□□ -1.5
CHL4	YDR254W	ADE1	P27616	306 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	PRR1	P28708	518 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	LHS1	P36016	881 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	ZTA1	P38230	334 aa	Known RBP	5.7	□□□□□ -1.5
CHL4	YDR254W	ERG7	P38604	731 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	VMA22	P38784	181 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	SHC1	P39000	512 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	GIM4	P40005	111 aa	Known RBP	5.7	□□□□□ -1.5
CHL4	YDR254W	TOS3	P43637	560 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	STR3	P53101	465 aa	Known RBP	5.7	□□□□□ -1.5
CHL4	YDR254W	PUS2	P53167	370 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	RRN9	P53437	365 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms