RNA–Protein interactions for RNA: YDR225W

HTA1, Transcript of Histone H2A, yeast

Gene HTA1, Length 399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTA1	YDR225W	RIB7	P33312	244 aa		3.2	□□□□□ -1.9
HTA1	YDR225W	OAR1	P35731	278 aa		3.2	□□□□□ -1.9
HTA1	YDR225W	LAG1	P38703	411 aa		3.2	□□□□□ -1.9
HTA1	YDR225W	YDR089W	P38966	869 aa		3.2	□□□□□ -1.9
HTA1	YDR225W	ELP2	P42935	788 aa		3.2	□□□□□ -1.9
HTA1	YDR225W	RPA34	P47006	233 aa	Predicted RBP	3.2	□□□□□ -1.9
HTA1	YDR225W	UBP8	P50102	471 aa		3.2	□□□□□ -1.9
HTA1	YDR225W	YIP5	P53108	310 aa		3.2	□□□□□ -1.9
HTA1	YDR225W	COP1	P53622	1201 aa	Known RBP	3.2	□□□□□ -1.9
HTA1	YDR225W	UTP6	Q02354	440 aa	Known RBP	3.2	□□□□□ -1.9
HTA1	YDR225W	SMA1	Q02651	245 aa		3.2	□□□□□ -1.9
HTA1	YDR225W	RBA50	Q04418	439 aa		3.2	□□□□□ -1.9
HTA1	YDR225W	ARP10	Q04549	284 aa		3.2	□□□□□ -1.9
HTA1	YDR225W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
HTA1	YDR225W	PNS1	Q12412	539 aa		3.2	□□□□□ -1.9
HTA1	YDR225W	YPR089W	O13585	888 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	SCEI	P03882	235 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	LEU4	P06208	619 aa	Known RBP	3.19	□□□□□ -1.9
HTA1	YDR225W	STE3	P06783	470 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	YMR085W	P0CF18	432 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	OM45	P16547	393 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	TYR1	P20049	452 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	RPB8	P20436	146 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	DBP3	P20447	523 aa	Known RBP	3.19	□□□□□ -1.9
HTA1	YDR225W	RDS1	P25611	832 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	NIP1	P32497	812 aa	Known RBP	3.19	□□□□□ -1.9
HTA1	YDR225W	SSE1	P32589	693 aa	Known RBP	3.19	□□□□□ -1.9
HTA1	YDR225W	STV1	P37296	890 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	OLA1	P38219	394 aa	Known RBP	3.19	□□□□□ -1.9
HTA1	YDR225W	EFM2	P38347	419 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	PHO90	P39535	881 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	SYG1	P40528	902 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	SAS2	P40963	338 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	POP1	P41812	875 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	YJR011C	P47086	261 aa	Predicted RBP	3.19	□□□□□ -1.9
HTA1	YDR225W	YJR154W	P47181	346 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	ASN2	P49090	572 aa	Known RBP	3.19	□□□□□ -1.9
HTA1	YDR225W	PKP2	P53170	491 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	PIB2	P53191	635 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	APM1	Q00776	475 aa	Predicted RBP	3.19	□□□□□ -1.9
HTA1	YDR225W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
HTA1	YDR225W	FMP30	Q02883	468 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	YDR541C	Q03049	344 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	TPO3	Q06451	622 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	RDR1	Q08904	546 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	NDJ1	Q12366	352 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	SFG1	Q12507	346 aa		3.19	□□□□□ -1.9
HTA1	YDR225W	ADE4	P04046	510 aa	Known RBP	3.18	□□□□□ -1.9
HTA1	YDR225W	ILV5	P06168	395 aa	Known RBP	3.18	□□□□□ -1.9
HTA1	YDR225W	SCH9	P11792	824 aa	Known RBP	3.18	□□□□□ -1.9
HTA1	YDR225W	REC114	P32841	428 aa		3.18	□□□□□ -1.9
HTA1	YDR225W	SOR1	P35497	357 aa	Known RBP	3.18	□□□□□ -1.9
HTA1	YDR225W	RRN10	P38204	145 aa		3.18	□□□□□ -1.9
HTA1	YDR225W	GPI16	P38875	610 aa		3.18	□□□□□ -1.9
HTA1	YDR225W	YHR218W	P38899	603 aa		3.18	□□□□□ -1.9
HTA1	YDR225W	CCT2	P39076	527 aa	Known RBP	3.18	□□□□□ -1.9
HTA1	YDR225W	IRC7	P43623	340 aa		3.18	□□□□□ -1.9
HTA1	YDR225W	NMD5	P46970	1048 aa		3.18	□□□□□ -1.9
HTA1	YDR225W	SLI1	P53304	468 aa		3.18	□□□□□ -1.9
HTA1	YDR225W	SOL4	P53315	255 aa		3.18	□□□□□ -1.9
HTA1	YDR225W	YDL218W	Q07629	317 aa		3.18	□□□□□ -1.9
HTA1	YDR225W	SOR2	Q07786	357 aa		3.18	□□□□□ -1.9
HTA1	YDR225W	PFA4	Q12006	378 aa		3.18	□□□□□ -1.9
HTA1	YDR225W	BUG1	Q12191	341 aa		3.18	□□□□□ -1.9
HTA1	YDR225W	MES1	P00958	751 aa	Known RBP	3.17	□□□□□ -1.9
HTA1	YDR225W	BAR1	P12630	587 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	SPO11	P23179	398 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	GRR1	P24814	1151 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	SNC1	P31109	117 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	HSP104	P31539	908 aa	Known RBP	3.17	□□□□□ -1.9
HTA1	YDR225W	MRPL40	P36534	297 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	MSG5	P38590	489 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	STN1	P38960	494 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	MKT1	P40850	830 aa	Known RBP	3.17	□□□□□ -1.9
HTA1	YDR225W	TAX4	P47030	604 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	BPL1	P48445	690 aa	Predicted RBP	3.17	□□□□□ -1.9
HTA1	YDR225W	ROG1	P53118	685 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	PRM1	P53835	661 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	ARP5	P53946	755 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	RHO4	Q00246	291 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	YPL014W	Q02606	381 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	ABZ2	Q03266	374 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	EKI1	Q03764	534 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	RRB1	Q04225	511 aa	Known RBP	3.17	□□□□□ -1.9
HTA1	YDR225W	VPS20	Q04272	221 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	HSP31	Q04432	237 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	PHO92	Q06390	306 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	MCP2	Q06567	569 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	IPK1	Q06667	281 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	RLP24	Q07915	199 aa	Known RBP	3.17	□□□□□ -1.9
HTA1	YDR225W	IRC10	Q08118	586 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	SRN2	Q99176	213 aa		3.17	□□□□□ -1.9
HTA1	YDR225W	EDE1	P34216	1381 aa		3.16	□□□□□ -1.9
HTA1	YDR225W	SAG1	P20840	650 aa		3.16	□□□□□ -1.9
HTA1	YDR225W	RPS2	P25443	254 aa	Known RBP	3.16	□□□□□ -1.9
HTA1	YDR225W	EBP2	P36049	427 aa	Known RBP	3.16	□□□□□ -1.9
HTA1	YDR225W	HOT13	P36078	116 aa		3.16	□□□□□ -1.9
HTA1	YDR225W	CBP4	P37267	147 aa		3.16	□□□□□ -1.9
HTA1	YDR225W	LEU5	P38702	357 aa		3.16	□□□□□ -1.9
HTA1	YDR225W	RRP4	P38792	359 aa	Known RBP	3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms