RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	HEL2	Q05580	639 aa	Known RBP	3.69	□□□□□ -1.82
APA1	YCL050C	YER078W-A	Q3E7A2	54 aa		3.69	□□□□□ -1.82
APA1	YCL050C	TOP1	P04786	769 aa		3.68	□□□□□ -1.82
APA1	YCL050C	HEM15	P16622	393 aa		3.68	□□□□□ -1.82
APA1	YCL050C	IDH2	P28241	369 aa	Known RBP	3.68	□□□□□ -1.82
APA1	YCL050C	GPI10	P30777	616 aa		3.68	□□□□□ -1.82
APA1	YCL050C	YBL059W	P34224	193 aa		3.68	□□□□□ -1.82
APA1	YCL050C	SWH1	P35845	1188 aa		3.68	□□□□□ -1.82
APA1	YCL050C	GCD10	P41814	478 aa		3.68	□□□□□ -1.82
APA1	YCL050C	YGR149W	P48236	432 aa		3.68	□□□□□ -1.82
APA1	YCL050C	RMD9	P53140	646 aa	Known RBP	3.68	□□□□□ -1.82
APA1	YCL050C	NCS2	P53923	493 aa	Predicted RBP	3.68	□□□□□ -1.82
APA1	YCL050C	PNG1	Q02890	363 aa		3.68	□□□□□ -1.82
APA1	YCL050C	RRN11	Q04712	507 aa		3.68	□□□□□ -1.82
APA1	YCL050C	YOR387C	Q08910	206 aa		3.68	□□□□□ -1.82
APA1	YCL050C	YPL199C	Q08954	240 aa		3.68	□□□□□ -1.82
APA1	YCL050C	SPT15	P13393	240 aa	Known RBP	3.67	□□□□□ -1.82
APA1	YCL050C	SPB1	P25582	841 aa	Predicted RBP	3.67	□□□□□ -1.82
APA1	YCL050C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.67	□□□□□ -1.82	not detected
APA1	YCL050C	SEC66	P33754	206 aa		3.67	□□□□□ -1.82
APA1	YCL050C	UTP9	P38882	575 aa	Known RBP	3.67	□□□□□ -1.82
APA1	YCL050C	MET18	P40469	1032 aa		3.67	□□□□□ -1.82
APA1	YCL050C	ARK1	P53974	638 aa		3.67	□□□□□ -1.82
APA1	YCL050C	SUB1	P54000	292 aa	Known RBP	3.67	□□□□□ -1.82
APA1	YCL050C	ODC1	Q03028	310 aa		3.67	□□□□□ -1.82
APA1	YCL050C	HHF1	P02309	103 aa	Known RBP	3.66	□□□□□ -1.82
APA1	YCL050C	ATP10	P18496	279 aa		3.66	□□□□□ -1.82
APA1	YCL050C	GYP6	P32806	458 aa		3.66	□□□□□ -1.82
APA1	YCL050C	THI2	P38141	450 aa		3.66	□□□□□ -1.82
APA1	YCL050C	YMR147W	P40218	223 aa	Known RBP	3.66	□□□□□ -1.82
APA1	YCL050C	YIL067C	P40514	678 aa		3.66	□□□□□ -1.82
APA1	YCL050C	RRT5	P43607	289 aa		3.66	□□□□□ -1.82
APA1	YCL050C	DSL1	P53847	754 aa		3.66	□□□□□ -1.82
APA1	YCL050C	PBA1	Q05778	276 aa		3.66	□□□□□ -1.82
APA1	YCL050C	ESA1	Q08649	445 aa		3.66	□□□□□ -1.82
APA1	YCL050C	MUM3	Q08750	479 aa		3.66	□□□□□ -1.82
APA1	YCL050C	THP3	Q12049	470 aa	Known RBP	3.66	□□□□□ -1.82
APA1	YCL050C	CHS1	P08004	1131 aa		3.65	□□□□□ -1.83
APA1	YCL050C	SPS4	P09937	338 aa		3.65	□□□□□ -1.83
APA1	YCL050C	OTU2	P38747	307 aa	Known RBP	3.65	□□□□□ -1.83
APA1	YCL050C	ART5	P53244	586 aa	Known RBP	3.65	□□□□□ -1.83
APA1	YCL050C	GOR1	P53839	350 aa		3.65	□□□□□ -1.83
APA1	YCL050C	JJJ1	P53863	590 aa		3.65	□□□□□ -1.83
APA1	YCL050C	IBD2	P53892	351 aa		3.65	□□□□□ -1.83
APA1	YCL050C	GIR2	Q03768	265 aa	Predicted RBP	3.65	□□□□□ -1.83
APA1	YCL050C	TAP42	Q04372	366 aa		3.65	□□□□□ -1.83
APA1	YCL050C	RQC1	Q05468	723 aa	Known RBP	3.65	□□□□□ -1.83
APA1	YCL050C	RRP12	Q12754	1228 aa	Known RBP	3.65	□□□□□ -1.83
APA1	YCL050C	MET17	P06106	444 aa		3.64	□□□□□ -1.83
APA1	YCL050C	SAM1	P10659	382 aa	Known RBP	3.64	□□□□□ -1.83
APA1	YCL050C	SAM2	P19358	384 aa	Known RBP	3.64	□□□□□ -1.83
APA1	YCL050C	YCR041W	P37265	110 aa		3.64	□□□□□ -1.83
APA1	YCL050C	VTC2	P43585	828 aa		3.64	□□□□□ -1.83
APA1	YCL050C	SHE10	P53075	577 aa		3.64	□□□□□ -1.83
APA1	YCL050C	PCP1	P53259	346 aa		3.64	□□□□□ -1.83
APA1	YCL050C	TSR2	Q06672	205 aa	Known RBP	3.64	□□□□□ -1.83
APA1	YCL050C	YLR108C	Q12259	485 aa		3.64	□□□□□ -1.83
APA1	YCL050C	RPL3	P14126	387 aa	Known RBP	3.63	□□□□□ -1.83
APA1	YCL050C	CKA1	P15790	372 aa		3.63	□□□□□ -1.83
APA1	YCL050C	CPR4	P25334	318 aa		3.63	□□□□□ -1.83
APA1	YCL050C	NAM9	P27929	486 aa		3.63	□□□□□ -1.83
APA1	YCL050C	NDE1	P40215	560 aa		3.63	□□□□□ -1.83
APA1	YCL050C	WWM1	P43582	211 aa	Known RBP	3.63	□□□□□ -1.83
APA1	YCL050C	IRC6	P43615	237 aa		3.63	□□□□□ -1.83
APA1	YCL050C	SSN8	P47821	323 aa		3.63	□□□□□ -1.83
APA1	YCL050C	MRPL19	P53875	158 aa		3.63	□□□□□ -1.83
APA1	YCL050C	ELP3	Q02908	557 aa	Known RBP	3.63	□□□□□ -1.83
APA1	YCL050C	MRP51	Q02950	344 aa		3.63	□□□□□ -1.83
APA1	YCL050C	PAL1	Q05518	499 aa	Known RBP	3.63	□□□□□ -1.83
APA1	YCL050C	PPH22	P23595	377 aa		3.62	□□□□□ -1.83
APA1	YCL050C	LDB16	P25587	256 aa		3.62	□□□□□ -1.83
APA1	YCL050C	SDH3	P33421	198 aa		3.62	□□□□□ -1.83
APA1	YCL050C	SMF1	P38925	575 aa		3.62	□□□□□ -1.83
APA1	YCL050C	TFG2	P41896	400 aa	Predicted RBP	3.62	□□□□□ -1.83
APA1	YCL050C	TRS85	P46944	698 aa		3.62	□□□□□ -1.83
APA1	YCL050C	YIP1	P53039	248 aa		3.62	□□□□□ -1.83
APA1	YCL050C	MNP1	P53163	194 aa	Predicted RBP	3.62	□□□□□ -1.83
APA1	YCL050C	BTN2	P53286	410 aa		3.62	□□□□□ -1.83
APA1	YCL050C	YDR387C	Q04162	555 aa		3.62	□□□□□ -1.83
APA1	YCL050C	APE2	P32454	952 aa	Known RBP	3.61	□□□□□ -1.83
APA1	YCL050C	NIP100	P33420	868 aa		3.61	□□□□□ -1.83
APA1	YCL050C	RFS1	P38234	210 aa	Known RBP	3.61	□□□□□ -1.83
APA1	YCL050C	PTH1	P38876	190 aa	Known RBP	3.61	□□□□□ -1.83
APA1	YCL050C	OST1	P41543	476 aa	Known RBP	3.61	□□□□□ -1.83
APA1	YCL050C	YGR210C	P42942	411 aa		3.61	□□□□□ -1.83
APA1	YCL050C	LAM5	P43560	674 aa		3.61	□□□□□ -1.83
APA1	YCL050C	HSP31	Q04432	237 aa		3.61	□□□□□ -1.83
APA1	YCL050C	TSR1	Q07381	788 aa	Known RBP	3.61	□□□□□ -1.83
APA1	YCL050C	ERV2	Q12284	196 aa		3.61	□□□□□ -1.83
APA1	YCL050C	GRX6	Q12438	231 aa		3.61	□□□□□ -1.83
APA1	YCL050C	YLR278C	Q05854	1341 aa		3.61	□□□□□ -1.83
APA1	YCL050C	RPI1	P23250	407 aa	Known RBP	3.6	□□□□□ -1.83
APA1	YCL050C	ROX1	P25042	368 aa		3.6	□□□□□ -1.83
APA1	YCL050C	SPS22	P25380	463 aa		3.6	□□□□□ -1.83
APA1	YCL050C	ARO2	P28777	376 aa	Known RBP	3.6	□□□□□ -1.83
APA1	YCL050C	RPN12	P32496	274 aa		3.6	□□□□□ -1.83
APA1	YCL050C	YEL045C	P32616	141 aa		3.6	□□□□□ -1.83
APA1	YCL050C	MRPL4	P36517	319 aa		3.6	□□□□□ -1.83
APA1	YCL050C	RIB5	P38145	238 aa		3.6	□□□□□ -1.83
APA1	YCL050C	VHC1	P38329	1120 aa		3.6	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms