RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W YAL037WP39728 267 aa5.46□□□□□ -1.53
SHM1YBR263W YER034WP40022 185 aaKnown RBP5.46□□□□□ -1.53
SHM1YBR263W SEC27P41811 889 aaKnown RBP5.46□□□□□ -1.53
SHM1YBR263W YJR149WP47177 404 aa5.46□□□□□ -1.53
SHM1YBR263W HXT16P47185 567 aa5.46□□□□□ -1.53
SHM1YBR263W HXT15P54854 567 aa5.46□□□□□ -1.53
SHM1YBR263W MRS2Q01926 470 aa5.46□□□□□ -1.53
SHM1YBR263W YML131WQ03102 365 aa5.46□□□□□ -1.53
SHM1YBR263W YMR034CQ05131 434 aaPredicted RBP5.46□□□□□ -1.53
SHM1YBR263W YDR056CQ12025 205 aa5.46□□□□□ -1.53
SHM1YBR263W RKM5Q12367 367 aa5.46□□□□□ -1.53
SHM1YBR263W RPL1AP0CX43 217 aaKnown RBP5.45□□□□□ -1.54
SHM1YBR263W RPL1BP0CX44 217 aaKnown RBP5.45□□□□□ -1.54
SHM1YBR263W BAS1P22035 811 aa5.45□□□□□ -1.54
SHM1YBR263W CDC10P25342 322 aaKnown RBP5.45□□□□□ -1.54
SHM1YBR263W RPC19P28000 142 aaKnown RBP5.45□□□□□ -1.54
SHM1YBR263W TRM7P38238 310 aaKnown RBP5.45□□□□□ -1.54
SHM1YBR263W INM1P38710 295 aa5.45□□□□□ -1.54
SHM1YBR263W ERV46P39727 415 aa5.45□□□□□ -1.54
SHM1YBR263W YJR030CP47101 745 aa5.45□□□□□ -1.54
SHM1YBR263W COS12P53053 380 aa5.45□□□□□ -1.54
SHM1YBR263W MDM34P53083 459 aa5.45□□□□□ -1.54
SHM1YBR263W SGF73P53165 657 aa5.45□□□□□ -1.54
SHM1YBR263W SUL2Q12325 893 aa5.45□□□□□ -1.54
SHM1YBR263W GPR1Q12361 961 aa5.45□□□□□ -1.54
SHM1YBR263W YPT6Q99260 215 aa5.45□□□□□ -1.54
SHM1YBR263W ACC1Q00955 2233 aaKnown RBP5.45□□□□□ -1.54
SHM1YBR263W TEL1P38110 2787 aa5.45□□□□□ -1.54
SHM1YBR263W MDM35O60200 86 aa5.45□□□□□ -1.54
SHM1YBR263W ARG1P22768 420 aa5.45□□□□□ -1.54
SHM1YBR263W RPS1AP33442 255 aaKnown RBP5.45□□□□□ -1.54
SHM1YBR263W RMA1P36001 430 aaKnown RBP5.45□□□□□ -1.54
SHM1YBR263W GIC1P38785 314 aa5.45□□□□□ -1.54
SHM1YBR263W BZZ1P38822 633 aa5.45□□□□□ -1.54
SHM1YBR263W GCD10P41814 478 aa5.45□□□□□ -1.54
SHM1YBR263W YGL176CP46945 554 aa5.45□□□□□ -1.54
SHM1YBR263W YPT32P51996 222 aaKnown RBP5.45□□□□□ -1.54
SHM1YBR263W MRM2P53123 320 aa5.45□□□□□ -1.54
SHM1YBR263W GTR2P53290 341 aa5.45□□□□□ -1.54
SHM1YBR263W VHS1Q03785 461 aa5.45□□□□□ -1.54
SHM1YBR263W EAF1Q06337 982 aa5.45□□□□□ -1.54
SHM1YBR263W YLR049CQ12110 428 aa5.45□□□□□ -1.54
SHM1YBR263W RRP42Q12277 265 aaPredicted RBP5.45□□□□□ -1.54
SHM1YBR263W RGT2Q12300 763 aa5.45□□□□□ -1.54
SHM1YBR263W RIB2Q12362 591 aaKnown RBP5.45□□□□□ -1.54
SHM1YBR263W MHT1Q12525 324 aa5.45□□□□□ -1.54
SHM1YBR263W CSF1Q12150 2958 aa5.44□□□□□ -1.54
SHM1YBR263W YLR358CO13565 187 aa5.44□□□□□ -1.54
SHM1YBR263W NPP1P25353 742 aa5.44□□□□□ -1.54
SHM1YBR263W BUB2P26448 306 aaPredicted RBP5.44□□□□□ -1.54
SHM1YBR263W HXT4P32467 576 aa5.44□□□□□ -1.54
SHM1YBR263W MEI5P32489 222 aa5.44□□□□□ -1.54
SHM1YBR263W NIP1P32497 812 aaKnown RBP5.44□□□□□ -1.54
SHM1YBR263W PET309P32522 965 aaPredicted RBP5.44□□□□□ -1.54
SHM1YBR263W NRP1P32770 719 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
SHM1YBR263W MRE11P32829 692 aa5.44□□□□□ -1.54
SHM1YBR263W CBF5P33322 483 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
SHM1YBR263W TOR1P35169 2470 aa5.44□□□□□ -1.54
SHM1YBR263W EMC3P36039 253 aa5.44□□□□□ -1.54
SHM1YBR263W ARA1P38115 344 aa5.44□□□□□ -1.54
SHM1YBR263W UTP9P38882 575 aaKnown RBP5.44□□□□□ -1.54
SHM1YBR263W HXT6P39003 570 aaKnown RBP5.44□□□□□ -1.54
SHM1YBR263W HXT7P39004 570 aa5.44□□□□□ -1.54
SHM1YBR263W MRX1P40050 688 aa5.44□□□□□ -1.54
SHM1YBR263W SCS2P40075 244 aaKnown RBP5.44□□□□□ -1.54
SHM1YBR263W NDE1P40215 560 aa5.44□□□□□ -1.54
SHM1YBR263W MET18P40469 1032 aa5.44□□□□□ -1.54
SHM1YBR263W FKH2P41813 862 aa5.44□□□□□ -1.54
SHM1YBR263W UBP6P43593 499 aaKnown RBP5.44□□□□□ -1.54
SHM1YBR263W NOP19P53317 196 aaPredicted RBP5.44□□□□□ -1.54
SHM1YBR263W YNL260CP53846 198 aa5.44□□□□□ -1.54
SHM1YBR263W RHO3Q00245 231 aaKnown RBP5.44□□□□□ -1.54
SHM1YBR263W MEH1Q02205 184 aa5.44□□□□□ -1.54
SHM1YBR263W EGD1Q02642 157 aaKnown RBP5.44□□□□□ -1.54
SHM1YBR263W YPL109CQ02981 657 aa5.44□□□□□ -1.54
SHM1YBR263W YML119WQ03208 357 aa5.44□□□□□ -1.54
SHM1YBR263W RCF1Q03713 159 aa5.44□□□□□ -1.54
SHM1YBR263W GLO2Q05584 274 aa5.44□□□□□ -1.54
SHM1YBR263W ATG29Q12092 213 aa5.44□□□□□ -1.54
SHM1YBR263W YPL245WQ12179 454 aaKnown RBP5.44□□□□□ -1.54
SHM1YBR263W YPR011CQ12251 326 aa5.44□□□□□ -1.54
SHM1YBR263W SRN2Q99176 213 aa5.44□□□□□ -1.54
SHM1YBR263W RPL40AP0CH08 128 aaKnown RBP5.43□□□□□ -1.54
SHM1YBR263W RPL40BP0CH09 128 aaKnown RBP5.43□□□□□ -1.54
SHM1YBR263W CDC13P32797 924 aaKnown RBP5.43□□□□□ -1.54
SHM1YBR263W COX13P32799 129 aa5.43□□□□□ -1.54
SHM1YBR263W DOM34P33309 386 aa5.43□□□□□ -1.54
SHM1YBR263W NTR2P36118 322 aaPredicted RBP5.43□□□□□ -1.54
SHM1YBR263W SHM2P37291 469 aaKnown RBP5.43□□□□□ -1.54
SHM1YBR263W YHR033WP38690 423 aa5.43□□□□□ -1.54
SHM1YBR263W GGC1P38988 300 aa5.43□□□□□ -1.54
SHM1YBR263W LYS1P38998 373 aaRIP-Chip data5.43□□□□□ -1.54not detected
SHM1YBR263W PLB1P39105 664 aa5.43□□□□□ -1.54
SHM1YBR263W LRO1P40345 661 aa5.43□□□□□ -1.54
SHM1YBR263W AZF1P41696 914 aa5.43□□□□□ -1.54
SHM1YBR263W FET5P43561 622 aa5.43□□□□□ -1.54
SHM1YBR263W RNR4P49723 345 aaKnown RBP5.43□□□□□ -1.54
SHM1YBR263W ERG26P53199 349 aaKnown RBP5.43□□□□□ -1.54
SHM1YBR263W VPS16Q03308 798 aa5.43□□□□□ -1.54
SHM1YBR263W YMR111CQ04461 462 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms