RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C EFM3P47163 339 aa6.68□□□□□ -1.34
TDP1YBR223C MNT2P53059 558 aa6.68□□□□□ -1.34
TDP1YBR223C PRM1P53835 661 aa6.68□□□□□ -1.34
TDP1YBR223C YNL140CP53910 189 aa6.68□□□□□ -1.34
TDP1YBR223C MPS1P54199 764 aa6.68□□□□□ -1.34
TDP1YBR223C SDH1Q00711 640 aa6.68□□□□□ -1.34
TDP1YBR223C RRN5Q02983 363 aa6.68□□□□□ -1.34
TDP1YBR223C YPL034WQ03083 165 aa6.68□□□□□ -1.34
TDP1YBR223C MGR3Q04472 501 aa6.68□□□□□ -1.34
TDP1YBR223C YOL131WQ08270 108 aa6.68□□□□□ -1.34
TDP1YBR223C MHT1Q12525 324 aa6.68□□□□□ -1.34
TDP1YBR223C RPN13O13563 156 aa6.68□□□□□ -1.34
TDP1YBR223C STE3P06783 470 aa6.68□□□□□ -1.34
TDP1YBR223C MSF1P08425 469 aa6.68□□□□□ -1.34
TDP1YBR223C GAL3P13045 520 aa6.68□□□□□ -1.34
TDP1YBR223C APA1P16550 321 aaKnown RBP6.68□□□□□ -1.34
TDP1YBR223C SEC17P32602 292 aa6.68□□□□□ -1.34
TDP1YBR223C SLX5P32828 619 aaKnown RBP6.68□□□□□ -1.34
TDP1YBR223C YPT52P36018 234 aaKnown RBP6.68□□□□□ -1.34
TDP1YBR223C YLF2P38746 405 aa6.68□□□□□ -1.34
TDP1YBR223C DUN1P39009 513 aa6.68□□□□□ -1.34
TDP1YBR223C MNN9P39107 395 aaKnown RBP6.68□□□□□ -1.34
TDP1YBR223C SPF1P39986 1215 aaKnown RBP6.68□□□□□ -1.34
TDP1YBR223C YJL055WP47044 245 aa6.68□□□□□ -1.34
TDP1YBR223C GPI8P49018 411 aa6.68□□□□□ -1.34
TDP1YBR223C DAM1P53267 343 aa6.68□□□□□ -1.34
TDP1YBR223C HST3P53687 447 aa6.68□□□□□ -1.34
TDP1YBR223C DUS1P53759 423 aaKnown RBP6.68□□□□□ -1.34
TDP1YBR223C YPL014WQ02606 381 aa6.68□□□□□ -1.34
TDP1YBR223C YPL107WQ02873 248 aa6.68□□□□□ -1.34
TDP1YBR223C BSC2Q05611 235 aa6.68□□□□□ -1.34
TDP1YBR223C YPR011CQ12251 326 aa6.68□□□□□ -1.34
TDP1YBR223C RRP42Q12277 265 aaPredicted RBP6.68□□□□□ -1.34
TDP1YBR223C MET8P15807 274 aa6.67□□□□□ -1.34
TDP1YBR223C POL30P15873 258 aaKnown RBP6.67□□□□□ -1.34
TDP1YBR223C PPH22P23595 377 aa6.67□□□□□ -1.34
TDP1YBR223C PEX1P24004 1043 aa6.67□□□□□ -1.34
TDP1YBR223C ATP11P32453 318 aa6.67□□□□□ -1.34
TDP1YBR223C VPS21P36017 210 aaKnown RBP6.67□□□□□ -1.34
TDP1YBR223C TSL1P38427 1098 aaKnown RBP6.67□□□□□ -1.34
TDP1YBR223C PEX18P38855 283 aa6.67□□□□□ -1.34
TDP1YBR223C TIM17P39515 158 aa6.67□□□□□ -1.34
TDP1YBR223C COG3P40094 801 aa6.67□□□□□ -1.34
TDP1YBR223C FAF1P40546 346 aaPredicted RBP6.67□□□□□ -1.34
TDP1YBR223C GOR1P53839 350 aa6.67□□□□□ -1.34
TDP1YBR223C RSC9Q03124 581 aa6.67□□□□□ -1.34
TDP1YBR223C YMR178WQ03219 274 aaKnown RBP6.67□□□□□ -1.34
TDP1YBR223C RCF1Q03713 159 aa6.67□□□□□ -1.34
TDP1YBR223C SEG1Q04279 960 aa6.67□□□□□ -1.34
TDP1YBR223C KRE28Q04431 385 aa6.67□□□□□ -1.34
TDP1YBR223C GAL83Q04739 417 aa6.67□□□□□ -1.34
TDP1YBR223C ARR1Q06596 294 aa6.67□□□□□ -1.34
TDP1YBR223C FLC1Q08967 793 aa6.67□□□□□ -1.34
TDP1YBR223C TRM10Q12400 293 aa6.67□□□□□ -1.34
TDP1YBR223C HTA1P04911 132 aaKnown RBP6.66□□□□□ -1.34
TDP1YBR223C CPA1P07258 411 aaKnown RBP6.66□□□□□ -1.34
TDP1YBR223C CDC4P07834 779 aa6.66□□□□□ -1.34
TDP1YBR223C SIS1P25294 352 aaKnown RBP6.66□□□□□ -1.34
TDP1YBR223C RHB1P25378 209 aa6.66□□□□□ -1.34
TDP1YBR223C GDH2P33327 1092 aaKnown RBP6.66□□□□□ -1.34
TDP1YBR223C DBP8P38719 431 aa6.66□□□□□ -1.34
TDP1YBR223C ATG7P38862 630 aa6.66□□□□□ -1.34
TDP1YBR223C IPT1P38954 527 aa6.66□□□□□ -1.34
TDP1YBR223C SOP4P39543 234 aaPredicted RBP6.66□□□□□ -1.34
TDP1YBR223C GLG2P47011 380 aa6.66□□□□□ -1.34
TDP1YBR223C YJR030CP47101 745 aa6.66□□□□□ -1.34
TDP1YBR223C EMC4P53073 190 aa6.66□□□□□ -1.34
TDP1YBR223C MDM34P53083 459 aa6.66□□□□□ -1.34
TDP1YBR223C MUS81Q04149 632 aaPredicted RBP6.66□□□□□ -1.34
TDP1YBR223C EMI2Q04409 500 aaKnown RBP6.66□□□□□ -1.34
TDP1YBR223C ERB1Q04660 807 aaKnown RBP6.66□□□□□ -1.34
TDP1YBR223C MDM36Q06820 579 aa6.66□□□□□ -1.34
TDP1YBR223C MCA1Q08601 432 aa6.66□□□□□ -1.34
TDP1YBR223C SMF3Q12078 473 aaPredicted RBP6.66□□□□□ -1.34
TDP1YBR223C AI3P03877 415 aa6.65□□□□□ -1.34
TDP1YBR223C BUD23P25627 275 aaPredicted RBP6.65□□□□□ -1.34
TDP1YBR223C RSC6P25632 483 aa6.65□□□□□ -1.34
TDP1YBR223C ISF1P32488 338 aa6.65□□□□□ -1.34
TDP1YBR223C NUF2P33895 451 aa6.65□□□□□ -1.34
TDP1YBR223C DLD3P39976 496 aaKnown RBP6.65□□□□□ -1.34
TDP1YBR223C JLP2P40206 208 aa6.65□□□□□ -1.34
TDP1YBR223C LAS21P40367 830 aa6.65□□□□□ -1.34
TDP1YBR223C YJR149WP47177 404 aa6.65□□□□□ -1.34
TDP1YBR223C YGR015CP53208 328 aa6.65□□□□□ -1.34
TDP1YBR223C SNF12P53628 566 aa6.65□□□□□ -1.34
TDP1YBR223C COG5P53951 403 aa6.65□□□□□ -1.34
TDP1YBR223C VHS1Q03785 461 aa6.65□□□□□ -1.34
TDP1YBR223C SPO71Q03868 1245 aa6.65□□□□□ -1.34
TDP1YBR223C NEJ1Q06148 342 aa6.65□□□□□ -1.34
TDP1YBR223C GRS2Q06817 618 aa6.65□□□□□ -1.34
TDP1YBR223C RGT2Q12300 763 aa6.65□□□□□ -1.34
TDP1YBR223C ENA1P13587 1091 aa6.65□□□□□ -1.35
TDP1YBR223C GCN3P14741 305 aa6.65□□□□□ -1.35
TDP1YBR223C SIR1P21691 654 aa6.65□□□□□ -1.35
TDP1YBR223C PEX34P25584 144 aa6.65□□□□□ -1.35
TDP1YBR223C SBA1P28707 216 aaKnown RBP6.65□□□□□ -1.35
TDP1YBR223C PXA2P34230 853 aa6.65□□□□□ -1.35
TDP1YBR223C RPF2P36160 344 aaKnown RBP6.65□□□□□ -1.35
TDP1YBR223C ARA1P38115 344 aa6.65□□□□□ -1.35
TDP1YBR223C INM1P38710 295 aa6.65□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms