RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE3	YBR130C	PMR1	P13586	950 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	RHB1	P25378	209 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	FUN19	P28003	413 aa	Predicted RBP	4.18	□□□□□ -1.74
SHE3	YBR130C	SIN4	P32259	974 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	VPS17	P32913	551 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	UIP5	P36137	443 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	ZTA1	P38230	334 aa	Known RBP	4.18	□□□□□ -1.74
SHE3	YBR130C	ERG7	P38604	731 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	YTA12	P40341	825 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	PSA1	P41940	361 aa	Known RBP	4.18	□□□□□ -1.74
SHE3	YBR130C	RHO5	P53879	331 aa	Known RBP	4.18	□□□□□ -1.74
SHE3	YBR130C	NUP100	Q02629	959 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	EKI1	Q03764	534 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	PRP42	Q03776	544 aa	Known RBP	4.18	□□□□□ -1.74
SHE3	YBR130C	MRPL1	Q04599	285 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	YDR341C	Q05506	607 aa	Known RBP	4.18	□□□□□ -1.74
SHE3	YBR130C	YLR456W	Q06199	204 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	GSH2	Q08220	491 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	RKM1	Q08961	583 aa	Predicted RBP	4.18	□□□□□ -1.74
SHE3	YBR130C	YLR112W	Q12130	139 aa		4.18	□□□□□ -1.74
SHE3	YBR130C	LSP1	Q12230	341 aa	Known RBP	4.18	□□□□□ -1.74
SHE3	YBR130C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.18	□□□□□ -1.74
SHE3	YBR130C	CAR1	P00812	333 aa	Known RBP	4.17	□□□□□ -1.74
SHE3	YBR130C	MES1	P00958	751 aa	Known RBP	4.17	□□□□□ -1.74
SHE3	YBR130C	SCEI	P03882	235 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	BAR1	P12630	587 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	GLK1	P17709	500 aa	Known RBP	4.17	□□□□□ -1.74
SHE3	YBR130C	YCR007C	P25354	239 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	ATP11	P32453	318 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	PDR3	P33200	976 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	LEU5	P38702	357 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	FLO5	P38894	1075 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	FAD1	P38913	306 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	SER3	P40054	469 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	CSM2	P40465	213 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	RTS2	P40962	232 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	TOF1	P53840	1238 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	IZH1	Q03419	316 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	RPN9	Q04062	393 aa	Known RBP	4.17	□□□□□ -1.74
SHE3	YBR130C	RUP1	Q12242	671 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	HIF1	Q12373	385 aa		4.17	□□□□□ -1.74
SHE3	YBR130C	CYB2	P00175	591 aa		4.16	□□□□□ -1.74
SHE3	YBR130C	SUC2	P00724	532 aa		4.16	□□□□□ -1.74
SHE3	YBR130C	HIS4	P00815	799 aa	Known RBP	4.16	□□□□□ -1.74
SHE3	YBR130C	MGR1	P25573	417 aa		4.16	□□□□□ -1.74
SHE3	YBR130C	RIM1	P32445	135 aa	Known RBP	4.16	□□□□□ -1.74
SHE3	YBR130C	PRP21	P32524	280 aa	Predicted RBP	4.16	□□□□□ -1.74
SHE3	YBR130C	RSM22	P36056	628 aa		4.16	□□□□□ -1.74
SHE3	YBR130C	RRN10	P38204	145 aa		4.16	□□□□□ -1.74
SHE3	YBR130C	YMR124W	P39523	943 aa	Known RBP	4.16	□□□□□ -1.74
SHE3	YBR130C	SYG1	P40528	902 aa		4.16	□□□□□ -1.74
SHE3	YBR130C	YJR011C	P47086	261 aa	Predicted RBP	4.16	□□□□□ -1.74
SHE3	YBR130C	ECM27	P47144	725 aa		4.16	□□□□□ -1.74
SHE3	YBR130C	PIB2	P53191	635 aa		4.16	□□□□□ -1.74
SHE3	YBR130C	ADA2	Q02336	434 aa		4.16	□□□□□ -1.74
SHE3	YBR130C	MSS11	Q03825	758 aa		4.16	□□□□□ -1.74
SHE3	YBR130C	THI7	Q05998	598 aa		4.16	□□□□□ -1.74
SHE3	YBR130C	REX4	Q08237	289 aa		4.16	□□□□□ -1.74
SHE3	YBR130C	TY1B-A	O13527	1196 aa	Known RBP	4.15	□□□□□ -1.75
SHE3	YBR130C	HSP104	P31539	908 aa	Known RBP	4.15	□□□□□ -1.75
SHE3	YBR130C	APE2	P32454	952 aa	Known RBP	4.15	□□□□□ -1.75
SHE3	YBR130C	MRPL4	P36517	319 aa		4.15	□□□□□ -1.75
SHE3	YBR130C	ASC1	P38011	319 aa	Known RBP	4.15	□□□□□ -1.75
SHE3	YBR130C	PCL6	P40038	420 aa		4.15	□□□□□ -1.75
SHE3	YBR130C	ELP2	P42935	788 aa		4.15	□□□□□ -1.75
SHE3	YBR130C	FYV8	P46949	817 aa	Known RBP	4.15	□□□□□ -1.75
SHE3	YBR130C	DRN1	P53255	507 aa	Known RBP	4.15	□□□□□ -1.75
SHE3	YBR130C	OCA2	P53949	197 aa		4.15	□□□□□ -1.75
SHE3	YBR130C	SAM50	P53969	484 aa		4.15	□□□□□ -1.75
SHE3	YBR130C	RIM13	Q03792	727 aa		4.15	□□□□□ -1.75
SHE3	YBR130C	YDR415C	Q04033	374 aa	Predicted RBP	4.15	□□□□□ -1.75
SHE3	YBR130C	DIC1	Q06143	298 aa		4.15	□□□□□ -1.75
SHE3	YBR130C	PHO92	Q06390	306 aa		4.15	□□□□□ -1.75
SHE3	YBR130C	YFH1	Q07540	174 aa		4.15	□□□□□ -1.75
SHE3	YBR130C	NBL1	Q3E7Y6	73 aa		4.15	□□□□□ -1.75
SHE3	YBR130C	SEC62	P21825	274 aa		4.14	□□□□□ -1.75
SHE3	YBR130C	RPI1	P23250	407 aa	Known RBP	4.14	□□□□□ -1.75
SHE3	YBR130C	RAD24	P32641	659 aa		4.14	□□□□□ -1.75
SHE3	YBR130C	PCF11	P39081	626 aa	Predicted RBP	4.14	□□□□□ -1.75
SHE3	YBR130C	FAU1	P40099	211 aa		4.14	□□□□□ -1.75
SHE3	YBR130C	YMR147W	P40218	223 aa	Known RBP	4.14	□□□□□ -1.75
SHE3	YBR130C	YIR016W	P40572	265 aa		4.14	□□□□□ -1.75
SHE3	YBR130C	YIF1	P53845	314 aa	Known RBP	4.14	□□□□□ -1.75
SHE3	YBR130C	GIP3	Q03016	1276 aa		4.14	□□□□□ -1.75
SHE3	YBR130C	YDR541C	Q03049	344 aa		4.14	□□□□□ -1.75
SHE3	YBR130C	SLD5	Q03406	294 aa		4.14	□□□□□ -1.75
SHE3	YBR130C	YEH2	Q07950	538 aa		4.14	□□□□□ -1.75
SHE3	YBR130C	KEL3	Q08979	651 aa	Predicted RBP	4.14	□□□□□ -1.75
SHE3	YBR130C	SRN2	Q99176	213 aa		4.14	□□□□□ -1.75
SHE3	YBR130C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SHE3	YBR130C	YEL043W	P32618	956 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	ECM15	P35195	104 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	SPC34	P36131	295 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	YBL028C	P38202	106 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	PFF1	P38244	976 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	SIF2	P38262	535 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	YSW1	P38280	609 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	OSH3	P38713	996 aa	Known RBP	4.13	□□□□□ -1.75
SHE3	YBR130C	SPC97	P38863	823 aa		4.13	□□□□□ -1.75
SHE3	YBR130C	XBP1	P40489	647 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms