RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W CUP9P41817 306 aa5.56□□□□□ -1.52
SHP1YBL058W NHP10Q03435 203 aa5.56□□□□□ -1.52
SHP1YBL058W YMR027WQ04371 470 aa5.56□□□□□ -1.52
SHP1YBL058W YDL218WQ07629 317 aa5.56□□□□□ -1.52
SHP1YBL058W PUS7Q08647 676 aaKnown RBP5.56□□□□□ -1.52
SHP1YBL058W MGR1P25573 417 aa5.55□□□□□ -1.52
SHP1YBL058W KAR4P25583 335 aa5.55□□□□□ -1.52
SHP1YBL058W CRM1P30822 1084 aaKnown RBP5.55□□□□□ -1.52
SHP1YBL058W CDC12P32468 407 aaKnown RBP5.55□□□□□ -1.52
SHP1YBL058W UBC6P33296 250 aaPredicted RBP5.55□□□□□ -1.52
SHP1YBL058W PRP39P39682 629 aaKnown RBP5.55□□□□□ -1.52
SHP1YBL058W EMP65P40085 556 aa5.55□□□□□ -1.52
SHP1YBL058W APQ12P40532 138 aa5.55□□□□□ -1.52
SHP1YBL058W YRB1P41920 201 aaKnown RBP5.55□□□□□ -1.52
SHP1YBL058W HOL1P53389 586 aa5.55□□□□□ -1.52
SHP1YBL058W SLT2Q00772 484 aa5.55□□□□□ -1.52
SHP1YBL058W UBP2Q01476 1272 aa5.55□□□□□ -1.52
SHP1YBL058W FDC1Q03034 503 aa5.55□□□□□ -1.52
SHP1YBL058W CSN9Q03981 162 aa5.55□□□□□ -1.52
SHP1YBL058W RAD34Q06665 692 aa5.55□□□□□ -1.52
SHP1YBL058W ENT4Q07872 247 aa5.55□□□□□ -1.52
SHP1YBL058W NBA1Q08229 501 aaKnown RBP5.55□□□□□ -1.52
SHP1YBL058W YPL245WQ12179 454 aaKnown RBP5.55□□□□□ -1.52
SHP1YBL058W NSI1Q12457 570 aa5.55□□□□□ -1.52
SHP1YBL058W RPB4P20433 221 aaPredicted RBP5.54□□□□□ -1.52
SHP1YBL058W MSN1P22148 382 aa5.54□□□□□ -1.52
SHP1YBL058W SPS22P25380 463 aa5.54□□□□□ -1.52
SHP1YBL058W TAH1P25638 111 aaPredicted RBP5.54□□□□□ -1.52
SHP1YBL058W YMC1P32331 307 aa5.54□□□□□ -1.52
SHP1YBL058W SSH4P32343 579 aa5.54□□□□□ -1.52
SHP1YBL058W ERG1P32476 496 aaKnown RBP5.54□□□□□ -1.52
SHP1YBL058W OAR1P35731 278 aa5.54□□□□□ -1.52
SHP1YBL058W CCT4P39078 528 aaKnown RBP5.54□□□□□ -1.52
SHP1YBL058W FRT2P39734 528 aa5.54□□□□□ -1.52
SHP1YBL058W INA22P40576 216 aa5.54□□□□□ -1.52
SHP1YBL058W RPL10P41805 221 aaKnown RBP5.54□□□□□ -1.52
SHP1YBL058W SEC27P41811 889 aaKnown RBP5.54□□□□□ -1.52
SHP1YBL058W TIM54P47045 478 aa5.54□□□□□ -1.52
SHP1YBL058W BIO3P50277 480 aa5.54□□□□□ -1.52
SHP1YBL058W ROG1P53118 685 aa5.54□□□□□ -1.52
SHP1YBL058W YNL260CP53846 198 aa5.54□□□□□ -1.52
SHP1YBL058W MPS1P54199 764 aa5.54□□□□□ -1.52
SHP1YBL058W RNY1Q02933 434 aaKnown RBP5.54□□□□□ -1.52
SHP1YBL058W BUD22Q04347 519 aaKnown RBP5.54□□□□□ -1.52
SHP1YBL058W BOP2Q06150 570 aa5.54□□□□□ -1.52
SHP1YBL058W YLR177WQ06251 628 aa5.54□□□□□ -1.52
SHP1YBL058W RRP15Q06511 250 aaPredicted RBP5.54□□□□□ -1.52
SHP1YBL058W YET3Q07451 203 aa5.54□□□□□ -1.52
SHP1YBL058W RRP40Q08285 240 aaKnown RBP5.54□□□□□ -1.52
SHP1YBL058W PUS9Q12069 462 aa5.54□□□□□ -1.52
SHP1YBL058W REX3Q12090 404 aa5.54□□□□□ -1.52
SHP1YBL058W PRS5Q12265 496 aaKnown RBP5.54□□□□□ -1.52
SHP1YBL058W MDY2Q12285 212 aa5.54□□□□□ -1.52
SHP1YBL058W GUK1P15454 187 aaKnown RBP5.53□□□□□ -1.52
SHP1YBL058W AMD2P22580 549 aa5.53□□□□□ -1.52
SHP1YBL058W YCL042WP25572 119 aa5.53□□□□□ -1.52
SHP1YBL058W ATG15P25641 520 aa5.53□□□□□ -1.52
SHP1YBL058W MLS1P30952 554 aa5.53□□□□□ -1.52
SHP1YBL058W ZIP1P31111 875 aa5.53□□□□□ -1.52
SHP1YBL058W CDC5P32562 705 aa5.53□□□□□ -1.52
SHP1YBL058W SUI1P32911 108 aaKnown RBP5.53□□□□□ -1.52
SHP1YBL058W ASK1P35734 292 aa5.53□□□□□ -1.52
SHP1YBL058W CBP4P37267 147 aa5.53□□□□□ -1.52
SHP1YBL058W ETR1P38071 380 aa5.53□□□□□ -1.52
SHP1YBL058W AIM46P38885 310 aa5.53□□□□□ -1.52
SHP1YBL058W FMP52P40008 231 aa5.53□□□□□ -1.52
SHP1YBL058W CAB2P40506 365 aa5.53□□□□□ -1.52
SHP1YBL058W NEO1P40527 1151 aa5.53□□□□□ -1.52
SHP1YBL058W MAD2P40958 196 aa5.53□□□□□ -1.52
SHP1YBL058W PAC11P40960 533 aa5.53□□□□□ -1.52
SHP1YBL058W SHY1P53266 389 aa5.53□□□□□ -1.52
SHP1YBL058W HPT1Q04178 221 aaKnown RBP5.53□□□□□ -1.52
SHP1YBL058W SPR28Q04921 423 aa5.53□□□□□ -1.52
SHP1YBL058W RIF2Q06208 395 aa5.53□□□□□ -1.52
SHP1YBL058W CHS5Q12114 671 aaKnown RBP5.53□□□□□ -1.52
SHP1YBL058W RIO1Q12196 484 aaKnown RBP5.53□□□□□ -1.52
SHP1YBL058W YDL177CQ12257 170 aa5.53□□□□□ -1.52
SHP1YBL058W TY1A-DR3Q12441 440 aa5.53□□□□□ -1.52
SHP1YBL058W YPL247CQ12523 523 aa5.53□□□□□ -1.52
SHP1YBL058W SEC16P48415 2195 aaKnown RBP5.52□□□□□ -1.53
SHP1YBL058W PHO4P07270 312 aaKnown RBP5.52□□□□□ -1.53
SHP1YBL058W SSA3P09435 649 aaKnown RBP5.52□□□□□ -1.53
SHP1YBL058W GLK1P17709 500 aaKnown RBP5.52□□□□□ -1.53
SHP1YBL058W TRX3P25372 127 aa5.52□□□□□ -1.53
SHP1YBL058W MKK1P32490 508 aa5.52□□□□□ -1.53
SHP1YBL058W RMA1P36001 430 aaKnown RBP5.52□□□□□ -1.53
SHP1YBL058W ASC1P38011 319 aaKnown RBP5.52□□□□□ -1.53
SHP1YBL058W YBR139WP38109 508 aa5.52□□□□□ -1.53
SHP1YBL058W MCM7P38132 845 aa5.52□□□□□ -1.53
SHP1YBL058W ALG3P38179 458 aa5.52□□□□□ -1.53
SHP1YBL058W RPS26AP39938 119 aaKnown RBP5.52□□□□□ -1.53
SHP1YBL058W RPS26BP39939 119 aaKnown RBP5.52□□□□□ -1.53
SHP1YBL058W YEL020CP39994 560 aa5.52□□□□□ -1.53
SHP1YBL058W NTA1P40354 457 aa5.52□□□□□ -1.53
SHP1YBL058W ICE2P40499 491 aa5.52□□□□□ -1.53
SHP1YBL058W GUS1P46655 708 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
SHP1YBL058W KTR5P53966 522 aaPredicted RBP5.52□□□□□ -1.53
SHP1YBL058W OAZ1Q02803 292 aa5.52□□□□□ -1.53
SHP1YBL058W YMR209CQ03648 457 aa5.52□□□□□ -1.53
SHP1YBL058W YMR210WQ03649 449 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms