RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C RCO1Q04779 684 aa5.34□□□□□ -1.55
RFA1YAR007C YHC1Q05900 231 aaKnown RBP5.34□□□□□ -1.55
RFA1YAR007C TRE2Q08693 809 aa5.34□□□□□ -1.55
RFA1YAR007C FEX1Q08913 375 aa5.34□□□□□ -1.55
RFA1YAR007C YPR027CQ12079 277 aa5.34□□□□□ -1.55
RFA1YAR007C NBP2Q12163 236 aa5.34□□□□□ -1.55
RFA1YAR007C TY1A-BLQ12266 440 aa5.34□□□□□ -1.55
RFA1YAR007C YLR126CQ12288 251 aa5.34□□□□□ -1.55
RFA1YAR007C JLP1Q12358 412 aa5.34□□□□□ -1.55
RFA1YAR007C WTM1Q12363 437 aaKnown RBP5.34□□□□□ -1.55
RFA1YAR007C IPP1P00817 287 aaKnown RBP5.33□□□□□ -1.56
RFA1YAR007C FPS1P23900 669 aa5.33□□□□□ -1.56
RFA1YAR007C RTG2P32608 588 aaKnown RBP5.33□□□□□ -1.56
RFA1YAR007C ANR2P36090 516 aaPredicted RBP5.33□□□□□ -1.56
RFA1YAR007C MSC7P38694 644 aa5.33□□□□□ -1.56
RFA1YAR007C FSH1P38777 243 aaKnown RBP5.33□□□□□ -1.56
RFA1YAR007C ERV46P39727 415 aa5.33□□□□□ -1.56
RFA1YAR007C PHB1P40961 287 aa5.33□□□□□ -1.56
RFA1YAR007C SSY5P47002 699 aa5.33□□□□□ -1.56
RFA1YAR007C YPT32P51996 222 aaKnown RBP5.33□□□□□ -1.56
RFA1YAR007C MNP1P53163 194 aaPredicted RBP5.33□□□□□ -1.56
RFA1YAR007C FMP48P53233 369 aa5.33□□□□□ -1.56
RFA1YAR007C SPC98P53540 846 aa5.33□□□□□ -1.56
RFA1YAR007C CAF40P53829 373 aa5.33□□□□□ -1.56
RFA1YAR007C MZM1Q03429 123 aaPredicted RBP5.33□□□□□ -1.56
RFA1YAR007C YDR131CQ03899 556 aa5.33□□□□□ -1.56
RFA1YAR007C SNU23Q12368 194 aaPredicted RBP5.33□□□□□ -1.56
RFA1YAR007C SEC53P07283 254 aaKnown RBP5.32□□□□□ -1.56
RFA1YAR007C CHS1P08004 1131 aa5.32□□□□□ -1.56
RFA1YAR007C MIS1P09440 975 aaKnown RBP5.32□□□□□ -1.56
RFA1YAR007C MRP2P10663 115 aaPredicted RBP5.32□□□□□ -1.56
RFA1YAR007C HYM1P32464 399 aa5.32□□□□□ -1.56
RFA1YAR007C LST4P34239 828 aa5.32□□□□□ -1.56
RFA1YAR007C CAF4P36130 643 aa5.32□□□□□ -1.56
RFA1YAR007C TVP38P36164 337 aa5.32□□□□□ -1.56
RFA1YAR007C MRPL7P36519 292 aa5.32□□□□□ -1.56
RFA1YAR007C RIB1P38066 345 aa5.32□□□□□ -1.56
RFA1YAR007C FTH1P38310 465 aa5.32□□□□□ -1.56
RFA1YAR007C MUP3P38734 546 aa5.32□□□□□ -1.56
RFA1YAR007C RRP4P38792 359 aaKnown RBP5.32□□□□□ -1.56
RFA1YAR007C DUN1P39009 513 aa5.32□□□□□ -1.56
RFA1YAR007C PLB1P39105 664 aa5.32□□□□□ -1.56
RFA1YAR007C MNN1P39106 762 aa5.32□□□□□ -1.56
RFA1YAR007C EXO1P39875 702 aa5.32□□□□□ -1.56
RFA1YAR007C ACA1P39970 489 aa5.32□□□□□ -1.56
RFA1YAR007C MTR3P48240 250 aaPredicted RBP5.32□□□□□ -1.56
RFA1YAR007C MPS2P53159 387 aa5.32□□□□□ -1.56
RFA1YAR007C NQM1P53228 333 aaPredicted RBP5.32□□□□□ -1.56
RFA1YAR007C IBD2P53892 351 aa5.32□□□□□ -1.56
RFA1YAR007C SLG1P54867 378 aa5.32□□□□□ -1.56
RFA1YAR007C YPL071CQ02864 156 aa5.32□□□□□ -1.56
RFA1YAR007C YML131WQ03102 365 aa5.32□□□□□ -1.56
RFA1YAR007C TRS31Q03337 283 aa5.32□□□□□ -1.56
RFA1YAR007C SCS7Q03529 384 aa5.32□□□□□ -1.56
RFA1YAR007C EFR3Q03653 782 aaKnown RBP5.32□□□□□ -1.56
RFA1YAR007C MFB1Q04922 465 aa5.32□□□□□ -1.56
RFA1YAR007C ECM7Q06200 448 aa5.32□□□□□ -1.56
RFA1YAR007C YPR084WQ06821 456 aa5.32□□□□□ -1.56
RFA1YAR007C YDL073WQ07454 984 aa5.32□□□□□ -1.56
RFA1YAR007C RSC58Q07979 502 aa5.32□□□□□ -1.56
RFA1YAR007C UAF30Q08747 228 aa5.32□□□□□ -1.56
RFA1YAR007C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
RFA1YAR007C FEX2Q08991 375 aa5.32□□□□□ -1.56
RFA1YAR007C ENV7Q12003 364 aa5.32□□□□□ -1.56
RFA1YAR007C MCD1Q12158 566 aa5.32□□□□□ -1.56
RFA1YAR007C HAL9Q12180 1030 aa5.32□□□□□ -1.56
RFA1YAR007C LAG2Q92325 660 aa5.32□□□□□ -1.56
RFA1YAR007C RPS9AO13516 197 aaKnown RBP5.32□□□□□ -1.56
RFA1YAR007C ALG7P07286 448 aa5.32□□□□□ -1.56
RFA1YAR007C DSF1P0CX08 502 aa5.32□□□□□ -1.56
RFA1YAR007C YNR073CP0CX09 502 aa5.32□□□□□ -1.56
RFA1YAR007C APE1P14904 514 aa5.32□□□□□ -1.56
RFA1YAR007C DPH2P32461 534 aa5.32□□□□□ -1.56
RFA1YAR007C UTR4P32626 227 aa5.32□□□□□ -1.56
RFA1YAR007C KAP122P32767 1081 aa5.32□□□□□ -1.56
RFA1YAR007C COX13P32799 129 aa5.32□□□□□ -1.56
RFA1YAR007C HIS7P33734 552 aaKnown RBP5.32□□□□□ -1.56
RFA1YAR007C TEF4P36008 412 aaKnown RBP5.32□□□□□ -1.56
RFA1YAR007C AGP2P38090 596 aa5.32□□□□□ -1.56
RFA1YAR007C YAP1801P38856 637 aa5.32□□□□□ -1.56
RFA1YAR007C EFM5P53200 248 aaKnown RBP5.32□□□□□ -1.56
RFA1YAR007C GND2P53319 492 aa5.32□□□□□ -1.56
RFA1YAR007C YPL068CQ02749 293 aa5.32□□□□□ -1.56
RFA1YAR007C YMR010WQ03687 405 aa5.32□□□□□ -1.56
RFA1YAR007C YDR249CQ03787 373 aa5.32□□□□□ -1.56
RFA1YAR007C HEL2Q05580 639 aaKnown RBP5.32□□□□□ -1.56
RFA1YAR007C GPB1Q08886 897 aa5.32□□□□□ -1.56
RFA1YAR007C MDM12Q92328 271 aa5.32□□□□□ -1.56
RFA1YAR007C RPS17AP02407 136 aaKnown RBP5.31□□□□□ -1.56
RFA1YAR007C HEM2P05373 342 aa5.31□□□□□ -1.56
RFA1YAR007C RPS17BP14127 136 aaKnown RBP5.31□□□□□ -1.56
RFA1YAR007C HPR1P17629 752 aaKnown RBP5.31□□□□□ -1.56
RFA1YAR007C DBP3P20447 523 aaKnown RBP5.31□□□□□ -1.56
RFA1YAR007C KIN3P22209 435 aa5.31□□□□□ -1.56
RFA1YAR007C GRR1P24814 1151 aa5.31□□□□□ -1.56
RFA1YAR007C CPR3P25719 182 aa5.31□□□□□ -1.56
RFA1YAR007C ERG9P29704 444 aa5.31□□□□□ -1.56
RFA1YAR007C MSS1P32559 526 aaPredicted RBP5.31□□□□□ -1.56
RFA1YAR007C YBR056WP38081 501 aa5.31□□□□□ -1.56
RFA1YAR007C HMF1P40037 129 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms