RNA–Protein interactions for RNA: ENST00000640978.1

CCDC197-206, Transcript of coiled-coil domain containing 197, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC197, Length 1,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-206ENST00000640978 USH1GQ495M9 461 aa16.58■□□□□ 0.24
CCDC197-206ENST00000640978 C9orf50Q5SZB4 431 aa16.58■□□□□ 0.24
CCDC197-206ENST00000640978 AGBL1Q96MI9 1066 aa16.58■□□□□ 0.24
CCDC197-206ENST00000640978 COL25A1Q9BXS0 654 aaPredicted RBP16.58■□□□□ 0.24
CCDC197-206ENST00000640978 VPS54Q9P1Q0 977 aa16.58■□□□□ 0.24
CCDC197-206ENST00000640978 FCER1AP12319 257 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 U2AF2P26368 475 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCDC197-206ENST00000640978 DDIT3P35638 169 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 TRAPPC10P48553 1259 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 HSD17B4P51659 736 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 ORC2Q13416 577 aaPredicted RBP16.57■□□□□ 0.24
CCDC197-206ENST00000640978 GNL2Q13823 731 aaKnown RBP16.57■□□□□ 0.24
CCDC197-206ENST00000640978 SHHQ15465 462 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 TRIM60Q495X7 471 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 ATL3Q6DD88 541 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 XRRA1Q6P2D8 792 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
CCDC197-206ENST00000640978 KRT25Q7Z3Z0 450 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 SH3RF1Q7Z6J0 888 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 BLIDQ8IZY5 108 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 DNERQ8NFT8 737 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 GPKOWQ92917 476 aaPredicted RBP eCLIP16.57■□□□□ 0.24
CCDC197-206ENST00000640978 MAML3Q96JK9 1138 aa16.57■□□□□ 0.24
CCDC197-206ENST00000640978 ADD3Q9UEY8 706 aaKnown RBP16.57■□□□□ 0.24
CCDC197-206ENST00000640978 TRIM43BA6NCK2 446 aa16.56■□□□□ 0.24
CCDC197-206ENST00000640978 SPDYE3A6NKU9 549 aa16.56■□□□□ 0.24
CCDC197-206ENST00000640978 LRRC41Q15345 812 aa16.56■□□□□ 0.24
CCDC197-206ENST00000640978 RNF207Q6ZRF8 634 aa16.56■□□□□ 0.24
CCDC197-206ENST00000640978 DIS3L2Q8IYB7 885 aaKnown RBP16.56■□□□□ 0.24
CCDC197-206ENST00000640978 ARRDC4Q8NCT1 418 aa16.56■□□□□ 0.24
CCDC197-206ENST00000640978 CLEC4DQ8WXI8 215 aa16.56■□□□□ 0.24
CCDC197-206ENST00000640978 TRIM43Q96BQ3 446 aaPredicted RBP16.56■□□□□ 0.24
CCDC197-206ENST00000640978 PDLIM7Q9NR12 457 aa16.56■□□□□ 0.24
CCDC197-206ENST00000640978 CHMP5Q9NZZ3 219 aa16.56■□□□□ 0.24
CCDC197-206ENST00000640978 DIS3Q9Y2L1 958 aaKnown RBP16.56■□□□□ 0.24
CCDC197-206ENST00000640978 hCG_1642624A0A1W2PR95 340 aa16.55■□□□□ 0.24
CCDC197-206ENST00000640978 ADCYAP1R1P41586 468 aa16.55■□□□□ 0.24
CCDC197-206ENST00000640978 CLK2P49760 499 aaKnown RBP16.55■□□□□ 0.24
CCDC197-206ENST00000640978 NCAPG2Q86XI2 1143 aa16.55■□□□□ 0.24
CCDC197-206ENST00000640978 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCDC197-206ENST00000640978 ANKRD35Q8N283 1001 aa16.55■□□□□ 0.24
CCDC197-206ENST00000640978 MSL3Q8N5Y2 521 aaKnown RBP16.55■□□□□ 0.24
CCDC197-206ENST00000640978 PIBF1Q8WXW3 757 aa16.55■□□□□ 0.24
CCDC197-206ENST00000640978 BADQ92934 168 aa16.55■□□□□ 0.24
CCDC197-206ENST00000640978 KBTBD13C9JR72 458 aa16.54■□□□□ 0.24
CCDC197-206ENST00000640978 STAM2O75886 525 aa16.54■□□□□ 0.24
CCDC197-206ENST00000640978 ITGB8P26012 769 aa16.54■□□□□ 0.24
CCDC197-206ENST00000640978 TYW1BQ6NUM6 668 aa16.54■□□□□ 0.24
CCDC197-206ENST00000640978 NOSTRINQ8IVI9 506 aa16.54■□□□□ 0.24
CCDC197-206ENST00000640978 FERMT2Q96AC1 680 aa16.54■□□□□ 0.24
CCDC197-206ENST00000640978 PRDM5Q9NQX1 630 aaPredicted RBP16.54■□□□□ 0.24
CCDC197-206ENST00000640978 CYP39A1Q9NYL5 469 aa16.54■□□□□ 0.24
CCDC197-206ENST00000640978 PRKAG2Q9UGJ0 569 aa16.54■□□□□ 0.24
CCDC197-206ENST00000640978 CCDC194A0A1B0GVG4 234 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 VPS37CA5D8V6 355 aaPredicted RBP16.53■□□□□ 0.24
CCDC197-206ENST00000640978 M0R2N6 131 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 MEIS2O14770 477 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 BRD1O95696 1058 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 ZSCAN22P10073 491 aaPredicted RBP16.53■□□□□ 0.24
CCDC197-206ENST00000640978 RILPL1Q5EBL4 403 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 ZNF697Q5TEC3 545 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 C1orf53Q5VUE5 145 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 MOXD1Q6UVY6 613 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 ZNF467Q7Z7K2 595 aaPredicted RBP16.53■□□□□ 0.24
CCDC197-206ENST00000640978 IWS1Q96ST2 819 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 NOL7Q9UMY1 257 aaKnown RBP16.53■□□□□ 0.24
CCDC197-206ENST00000640978 MTMR6Q9Y217 621 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 OPLAHO14841 1288 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 BMP15O95972 392 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 CFBP00751 764 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
CCDC197-206ENST00000640978 PGK2P07205 417 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 TAL1P17542 331 aaPredicted RBP16.53■□□□□ 0.24
CCDC197-206ENST00000640978 USP11P51784 963 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 NONOQ15233 471 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC197-206ENST00000640978 NPY5RQ15761 445 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 NSUN6Q8TEA1 469 aaKnown RBP16.53■□□□□ 0.24
CCDC197-206ENST00000640978 AIFM3Q96NN9 605 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 MMP19Q99542 508 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 CDX2Q99626 313 aaPredicted RBP16.53■□□□□ 0.24
CCDC197-206ENST00000640978 TTYH1Q9H313 450 aaPredicted RBP16.53■□□□□ 0.24
CCDC197-206ENST00000640978 SEMA6BQ9H3T3 888 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 A1CFQ9NQ94 594 aaKnown RBP16.53■□□□□ 0.24
CCDC197-206ENST00000640978 RIPK3Q9Y572 518 aa16.53■□□□□ 0.24
CCDC197-206ENST00000640978 ZNFX1Q9P2E3 1918 aaKnown RBP16.52■□□□□ 0.24
CCDC197-206ENST00000640978 FRMPD4Q14CM0 1322 aa16.52■□□□□ 0.24
CCDC197-206ENST00000640978 NFIBO00712 420 aa16.52■□□□□ 0.23
CCDC197-206ENST00000640978 PPFIA3O75145 1194 aa16.52■□□□□ 0.23
CCDC197-206ENST00000640978 GCFC2P16383 781 aaKnown RBP16.52■□□□□ 0.23
CCDC197-206ENST00000640978 EPHB4P54760 987 aa16.52■□□□□ 0.23
CCDC197-206ENST00000640978 SNAP25P60880 206 aa16.52■□□□□ 0.23
CCDC197-206ENST00000640978 RPS6P62753 249 aaKnown RBP16.52■□□□□ 0.23
CCDC197-206ENST00000640978 NSMFQ6X4W1 530 aa16.52■□□□□ 0.23
CCDC197-206ENST00000640978 LENG1Q96BZ8 264 aaPredicted RBP16.52■□□□□ 0.23
CCDC197-206ENST00000640978 HOMER2Q9NSB8 354 aa16.52■□□□□ 0.23
CCDC197-206ENST00000640978 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.23
CCDC197-206ENST00000640978 KCNJ14Q9UNX9 436 aa16.52■□□□□ 0.23
CCDC197-206ENST00000640978 PHF24Q9UPV7 400 aa16.52■□□□□ 0.23
CCDC197-206ENST00000640978 MUC3AQ02505 3323 aa16.52■□□□□ 0.23
CCDC197-206ENST00000640978 DNAJC25-GNG10A0A024R161 153 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms