RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 BFSP2Q13515 415 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 LAMC2Q13753 1193 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 DGKDQ16760 1214 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 FAM47CQ5HY64 1035 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 TMTC2Q8N394 836 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 CCDC155Q8N6L0 562 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 MAFAQ8NHW3 353 aaPredicted RBP15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 PBX4Q9BYU1 374 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 ZNF576Q9H609 170 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 MSRAQ9UJ68 235 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 NOD1Q9Y239 953 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 MRVI1Q9Y6F6 885 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 GCOM1H8Y6P7 765 aaPredicted RBP15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 OPLAHO14841 1288 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 POLR2MP0CAP2 368 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 TGFB3P10600 412 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 ACTN1P12814 892 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 SMARCA1P28370 1054 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 KIF5BP33176 963 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 LY6KQ17RY6 165 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 TMEM67Q5HYA8 995 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 VSIG10LQ86VR7 867 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 HOMER1Q86YM7 354 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 MB21D2Q8IYB1 491 aaPredicted RBP15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 RETREG2Q8NC44 543 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 CAGE1Q8TC20 777 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 AFG1LQ8WV93 481 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 MYLIPQ8WY64 445 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 LZTS2Q9BRK4 669 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 PDCD2LQ9BRP1 358 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 RBM8AQ9Y5S9 174 aaKnown RBP15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 CHD7Q9P2D1 2997 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 TANC1Q9C0D5 1861 aa15.23■□□□□ 0.03
SYNGAP1-224ENST00000637721 MYH7BA7E2Y1 1941 aa15.22■□□□□ 0.03
SYNGAP1-224ENST00000637721 PPP1R11O60927 126 aaPredicted RBP15.22■□□□□ 0.03
SYNGAP1-224ENST00000637721 STAM2O75886 525 aa15.22■□□□□ 0.03
SYNGAP1-224ENST00000637721 DDAH1O94760 285 aa15.22■□□□□ 0.03
SYNGAP1-224ENST00000637721 PARNO95453 639 aaKnown RBP15.22■□□□□ 0.03
SYNGAP1-224ENST00000637721 CYP2C9P11712 490 aa15.22■□□□□ 0.03
SYNGAP1-224ENST00000637721 OTOP2Q7RTS6 562 aa15.22■□□□□ 0.03
SYNGAP1-224ENST00000637721 PPTC7Q8NI37 304 aa15.22■□□□□ 0.03
SYNGAP1-224ENST00000637721 CTCFLQ8NI51 663 aaPredicted RBP15.22■□□□□ 0.03
SYNGAP1-224ENST00000637721 IGDCC4Q8TDY8 1250 aa15.22■□□□□ 0.03
SYNGAP1-224ENST00000637721 PIGSQ96S52 555 aa15.22■□□□□ 0.03
SYNGAP1-224ENST00000637721 SLC4A7Q9Y6M7 1214 aa15.22■□□□□ 0.03
SYNGAP1-224ENST00000637721 TRANK1O15050 2925 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 CYTH3O43739 400 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 PPFIA4O75335 1185 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 CCND2P30279 289 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 MCM5P33992 734 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 GNAQP50148 359 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 GRIN2CQ14957 1233 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 PGM5Q15124 567 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 PTGISQ16647 500 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 SKAP1Q86WV1 359 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 DHX37Q8IY37 1157 aaKnown RBP15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 AFAP1L1Q8TED9 768 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 SCLYQ96I15 445 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 TMEM87BQ96K49 555 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 GAS2L1Q99501 681 aaPredicted RBP15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 SPZ1Q9BXG8 430 aa15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 CXXC1Q9P0U4 656 aaPredicted RBP15.21■□□□□ 0.03
SYNGAP1-224ENST00000637721 IQCF3P0C7M6 154 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 CALM1P0DP23 149 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 CALM2P0DP24 149 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 CALM3P0DP25 149 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 MYCLP12524 364 aaPredicted RBP15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 HOXD8P13378 290 aaPredicted RBP15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 LIFRP42702 1097 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 ANTXR2P58335 489 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 GNPTABQ3T906 1256 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 CHST3Q7LGC8 479 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 ZNF654Q8IZM8 581 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 KAT2BQ92831 832 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 LSG1Q9H089 658 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 SLC28A3Q9HAS3 691 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 GBF1Q92538 1859 aa15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 TRIP12Q14669 1992 aaPredicted RBP15.2■□□□□ 0.02
SYNGAP1-224ENST00000637721 FRMPD4Q14CM0 1322 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 ZBBXA8MT70 800 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 GRXCR1A8MXD5 290 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 BAIAP3O94812 1187 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 F2P00734 622 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 HOXA13P31271 388 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 PBX2P40425 430 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 RBL2Q08999 1139 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 SLC35G1Q2M3R5 365 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 MYSM1Q5VVJ2 828 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 C7orf31Q8N865 590 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 PHOSPHO2Q8TCD6 241 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 RRP36Q96EU6 259 aaKnown RBP15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 SLC9A7Q96T83 725 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 ESYT1Q9BSJ8 1104 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 SENP2Q9HC62 589 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 SEC63Q9UGP8 760 aaKnown RBP15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 GTF2IRD1Q9UHL9 959 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 PCDHA11Q9Y5I1 949 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms