RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 LENG1Q96BZ8 264 aaPredicted RBP15.58■□□□□ 0.08
NEK3-210ENST00000620675 MCOLN1Q9GZU1 580 aa15.58■□□□□ 0.08
NEK3-210ENST00000620675 MAF1Q9H063 256 aa15.58■□□□□ 0.08
NEK3-210ENST00000620675 KIF3AQ9Y496 699 aa15.58■□□□□ 0.08
NEK3-210ENST00000620675 WDR81Q562E7 1941 aa15.57■□□□□ 0.08
NEK3-210ENST00000620675 STX6O43752 255 aa15.57■□□□□ 0.08
NEK3-210ENST00000620675 PRKAR2AP13861 404 aaKnown RBP15.57■□□□□ 0.08
NEK3-210ENST00000620675 CCND3P30281 292 aaPredicted RBP15.57■□□□□ 0.08
NEK3-210ENST00000620675 NBR1Q14596 966 aa15.57■□□□□ 0.08
NEK3-210ENST00000620675 MTFR1Q15390 333 aa15.57■□□□□ 0.08
NEK3-210ENST00000620675 FBXO46Q6PJ61 603 aaPredicted RBP15.57■□□□□ 0.08
NEK3-210ENST00000620675 SYNGAP1Q96PV0 1343 aa15.57■□□□□ 0.08
NEK3-210ENST00000620675 ASB14A6NK59 587 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 FAM86B1E9PN63 330 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 FOSP01100 380 aaPredicted RBP15.56■□□□□ 0.08
NEK3-210ENST00000620675 HMGCRP04035 888 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 FAM86B2P0C5J1 330 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 ZNF865P0CJ78 1059 aaPredicted RBP15.56■□□□□ 0.08
NEK3-210ENST00000620675 ITGB5P18084 799 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 U2AF2P26368 475 aaKnown RBP eCLIP15.56■□□□□ 0.082e-7■■□□□ 13
NEK3-210ENST00000620675 PDE4DQ08499 809 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 GJC2Q5T442 439 aaPredicted RBP15.56■□□□□ 0.08
NEK3-210ENST00000620675 ANO1Q5XXA6 986 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 FAM173BQ6P4H8 233 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 BCAS3Q9H6U6 928 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 ZHX1Q9UKY1 873 aaPredicted RBP15.56■□□□□ 0.08
NEK3-210ENST00000620675 ZDHHC9Q9Y397 364 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 CCDC194A0A1B0GVG4 234 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.56■□□□□ 0.08
NEK3-210ENST00000620675 CYBAP13498 195 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 SEMA3FQ13275 785 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 SAFBQ15424 915 aaKnown RBP eCLIP15.56■□□□□ 0.08
NEK3-210ENST00000620675 SLC9C1Q4G0N8 1177 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 PCNX4Q63HM2 1172 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 TAPT1Q6NXT6 567 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 SEPT14Q6ZU15 432 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 SLAIN1Q8ND83 568 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 IWS1Q96ST2 819 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 WDR11Q9BZH6 1224 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 FOXP1Q9H334 677 aaPredicted RBP15.56■□□□□ 0.08
NEK3-210ENST00000620675 BRMS1Q9HCU9 246 aa15.56■□□□□ 0.08
NEK3-210ENST00000620675 ARIH2O95376 493 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 TDP2O95551 362 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 ATP2B1P20020 1258 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 PDCP20941 246 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 CCND2P30279 289 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 DDIT3P35638 169 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 ACVR2BQ13705 512 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 NONOQ15233 471 aaKnown RBP eCLIP15.55■□□□□ 0.08
NEK3-210ENST00000620675 STXBP2Q15833 593 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 MAP3K21Q5TCX8 1036 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 KRT25Q7Z3Z0 450 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 NOSTRINQ8IVI9 506 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 ADCYAP1R1P41586 468 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 TOB1P50616 345 aaPredicted RBP15.55■□□□□ 0.08
NEK3-210ENST00000620675 IRX5P78411 483 aaPredicted RBP15.55■□□□□ 0.08
NEK3-210ENST00000620675 MFSD14CQ5VZR4 134 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 GJA10Q969M2 543 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 CHAMP1Q96JM3 812 aa15.55■□□□□ 0.08
NEK3-210ENST00000620675 SORBS3O60504 671 aa15.54■□□□□ 0.08
NEK3-210ENST00000620675 SP2Q02086 613 aa15.54■□□□□ 0.08
NEK3-210ENST00000620675 RESTQ13127 1097 aa15.54■□□□□ 0.08
NEK3-210ENST00000620675 LETM2Q2VYF4 491 aa15.54■□□□□ 0.08
NEK3-210ENST00000620675 CCDC144BQ3MJ40 725 aa15.54■□□□□ 0.08
NEK3-210ENST00000620675 COPS5Q92905 334 aa15.54■□□□□ 0.08
NEK3-210ENST00000620675 LENG9Q96B70 501 aa15.54■□□□□ 0.08
NEK3-210ENST00000620675 UNC93B1Q9H1C4 597 aa15.54■□□□□ 0.08
NEK3-210ENST00000620675 TELO2Q9Y4R8 837 aa15.54■□□□□ 0.08
NEK3-210ENST00000620675 UBIAD1Q9Y5Z9 338 aa15.54■□□□□ 0.08
NEK3-210ENST00000620675 IGLV3-22A0A075B6J6 115 aa15.53■□□□□ 0.08
NEK3-210ENST00000620675 POTEFA5A3E0 1075 aa15.53■□□□□ 0.08
NEK3-210ENST00000620675 SLC37A4O43826 429 aa15.53■□□□□ 0.08
NEK3-210ENST00000620675 EIF3JO75822 258 aaKnown RBP15.53■□□□□ 0.08
NEK3-210ENST00000620675 ARP10275 920 aa15.53■□□□□ 0.08
NEK3-210ENST00000620675 GNL2Q13823 731 aaKnown RBP15.53■□□□□ 0.08
NEK3-210ENST00000620675 MSL3Q8N5Y2 521 aaKnown RBP15.53■□□□□ 0.08
NEK3-210ENST00000620675 INPP4AQ96PE3 977 aaPredicted RBP15.53■□□□□ 0.08
NEK3-210ENST00000620675 ABHD16BQ9H3Z7 469 aa15.53■□□□□ 0.08
NEK3-210ENST00000620675 PKD2L1Q9P0L9 805 aa15.53■□□□□ 0.08
NEK3-210ENST00000620675 CNPY2Q9Y2B0 182 aa15.53■□□□□ 0.08
NEK3-210ENST00000620675 ATP9AO75110 1047 aa15.53■□□□□ 0.08
NEK3-210ENST00000620675 CYP3A4P08684 503 aa15.53■□□□□ 0.08
NEK3-210ENST00000620675 LY6KQ17RY6 165 aa15.53■□□□□ 0.08
NEK3-210ENST00000620675 FOXD4L6Q3SYB3 417 aaPredicted RBP15.53■□□□□ 0.08
NEK3-210ENST00000620675 FOXD4L3Q6VB84 417 aaPredicted RBP15.53■□□□□ 0.08
NEK3-210ENST00000620675 TEX2Q8IWB9 1127 aa15.53■□□□□ 0.08
NEK3-210ENST00000620675 TRMT44Q8IYL2 757 aaKnown RBP15.53■□□□□ 0.08
NEK3-210ENST00000620675 CNGA1P29973 690 aa15.52■□□□□ 0.08
NEK3-210ENST00000620675 PKN2Q16513 984 aaKnown RBP15.52■□□□□ 0.08
NEK3-210ENST00000620675 CEP55Q53EZ4 464 aa15.52■□□□□ 0.08
NEK3-210ENST00000620675 PRR16Q569H4 304 aa15.52■□□□□ 0.08
NEK3-210ENST00000620675 NEK8Q86SG6 692 aa15.52■□□□□ 0.08
NEK3-210ENST00000620675 ZNF333Q96JL9 665 aa15.52■□□□□ 0.08
NEK3-210ENST00000620675 MXRA8Q9BRK3 442 aa15.52■□□□□ 0.08
NEK3-210ENST00000620675 FTOQ9C0B1 505 aaKnown RBP eCLIP15.52■□□□□ 0.08
NEK3-210ENST00000620675 VTA1Q9NP79 307 aa15.52■□□□□ 0.08
NEK3-210ENST00000620675 LOC102724159A0A0B4J2E5 919 aa15.52■□□□□ 0.07
NEK3-210ENST00000620675 MEIS1O00470 390 aa15.52■□□□□ 0.07
NEK3-210ENST00000620675 CCNT1O60563 726 aaKnown RBP15.52■□□□□ 0.07
NEK3-210ENST00000620675 SMPD1P17405 629 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms