RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 ACCSLQ4AC99 568 aa12.18□□□□□ -0.46
CDH4-202ENST00000611855 PNMA8AQ86V59 439 aaPredicted RBP12.18□□□□□ -0.46
CDH4-202ENST00000611855 FAM228AQ86W67 206 aa12.18□□□□□ -0.46
CDH4-202ENST00000611855 CCDC170Q8IYT3 715 aa12.18□□□□□ -0.46
CDH4-202ENST00000611855 FNBP4Q8N3X1 1017 aaPredicted RBP12.18□□□□□ -0.46
CDH4-202ENST00000611855 PURBQ96QR8 312 aaKnown RBP12.18□□□□□ -0.46
CDH4-202ENST00000611855 EVA1CP58658 441 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 CHRNDQ07001 517 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 TXNRD1Q16881 649 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 LETM2Q2VYF4 491 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 EGFL6Q8IUX8 553 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 ALS2CR12Q96Q35 445 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 TLR10Q9BXR5 811 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 LMTK3Q96Q04 1460 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 MYO1EQ12965 1108 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 PFKFB3Q16875 520 aaPredicted RBP12.17□□□□□ -0.46
CDH4-202ENST00000611855 HIBCHQ6NVY1 386 aaPredicted RBP12.17□□□□□ -0.46
CDH4-202ENST00000611855 GLIS3Q8NEA6 775 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 BUB1BO60566 1050 aaPredicted RBP12.17□□□□□ -0.46
CDH4-202ENST00000611855 RHOBTB3O94955 611 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 CCNE1P24864 410 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 TECP42680 631 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 PPP1R7Q15435 360 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 QPCTQ16769 361 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 MSL1Q68DK7 614 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 KDM7AQ6ZMT4 941 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 CACNA2D4Q7Z3S7 1137 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 TCP11Q8WWU5 503 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 RIOK1Q9BRS2 568 aaKnown RBP12.17□□□□□ -0.46
CDH4-202ENST00000611855 OSBPL7Q9BZF2 842 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 SEMA6BQ9H3T3 888 aa12.17□□□□□ -0.46
CDH4-202ENST00000611855 FAM107AO95990 144 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 CABP7Q86V35 215 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 DDX42Q86XP3 938 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDH4-202ENST00000611855 SPDL1Q96EA4 605 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 NUP58Q9BVL2 599 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 PLAAQ9Y263 795 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 ENO4A6NNW6 628 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 A6NNZ2 444 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 CLTAP09496 248 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 IGHMBP2P38935 993 aaKnown RBP12.16□□□□□ -0.46
CDH4-202ENST00000611855 EHHADHQ08426 723 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 TUBB8Q3ZCM7 444 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 CPLX4Q7Z7G2 160 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 IFT20Q8IY31 132 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 ZNF384Q8TF68 577 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDH4-202ENST00000611855 TRIM9Q9C026 710 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 EPB41P11171 864 aaKnown RBP12.16□□□□□ -0.46
CDH4-202ENST00000611855 CALRP27797 417 aaKnown RBP12.16□□□□□ -0.46
CDH4-202ENST00000611855 CRYMQ14894 314 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 KIAA0895Q8NCT3 520 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 ATP6V1G3Q96LB4 118 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 TSGA10Q9BZW7 698 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 KIF9Q9HAQ2 790 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 VAT1LQ9HCJ6 419 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 KBTBD4Q9NVX7 518 aa12.16□□□□□ -0.46
CDH4-202ENST00000611855 CCNT1O60563 726 aaKnown RBP12.15□□□□□ -0.46
CDH4-202ENST00000611855 PALMO75781 387 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 TCP1P17987 556 aaKnown RBP12.15□□□□□ -0.46
CDH4-202ENST00000611855 RCAN1P53805 252 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 WLSQ5T9L3 541 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 KLHDC7AQ5VTJ3 777 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 CASKIN2Q8WXE0 1202 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 RSRC1Q96IZ7 334 aaKnown RBP12.15□□□□□ -0.46
CDH4-202ENST00000611855 NDST4Q9H3R1 872 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 PHF20L1A8MW92 1017 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 CALM1P0DP23 149 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 CALM2P0DP24 149 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 CALM3P0DP25 149 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 PPP2R5BQ15173 497 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 MICAL1Q8TDZ2 1067 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 DYNLL2Q96FJ2 89 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 TACO1Q9BSH4 297 aaKnown RBP12.15□□□□□ -0.46
CDH4-202ENST00000611855 L3MBTL1Q9Y468 752 aa12.15□□□□□ -0.46
CDH4-202ENST00000611855 USP17L3A6NCW0 530 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 USP17L4A6NCW7 530 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 KLRK1P26718 216 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 TRAPPC10P48553 1259 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 PAK2Q13177 524 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 ARL6IP4Q66PJ3 421 aaKnown RBP12.14□□□□□ -0.47
CDH4-202ENST00000611855 USP17L1Q7RTZ2 530 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 STAMBPL1Q96FJ0 436 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 DHTKD1Q96HY7 919 aaPredicted RBP12.14□□□□□ -0.47
CDH4-202ENST00000611855 PYM1Q9BRP8 204 aaKnown RBP12.14□□□□□ -0.47
CDH4-202ENST00000611855 PACSIN1Q9BY11 444 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 TBC1D7Q9P0N9 293 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 PCDHA6Q9UN73 950 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 PCDHA4Q9UN74 947 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 PCDHA8Q9Y5H6 950 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 EME2A4GXA9 379 aaPredicted RBP12.14□□□□□ -0.47
CDH4-202ENST00000611855 GMNCA6NCL1 334 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 DDAH1O94760 285 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 USP17L8P0C7I0 530 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 CYP19A1P11511 503 aaPredicted RBP12.14□□□□□ -0.47
CDH4-202ENST00000611855 SCTRP47872 440 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 KCNB1Q14721 858 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 VWA3BQ502W6 1294 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 CACNA2D3Q8IZS8 1091 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms