RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 SLC17A8Q8NDX2 589 aa16.34■□□□□ 0.21
CTSA-211ENST00000606066 TMX3Q96JJ7 454 aa16.34■□□□□ 0.21
CTSA-211ENST00000606066 ALG1Q9BT22 464 aa16.34■□□□□ 0.21
CTSA-211ENST00000606066 KATNBL1Q9H079 304 aa16.34■□□□□ 0.21
CTSA-211ENST00000606066 OGDHLQ9ULD0 1010 aa16.34■□□□□ 0.21
CTSA-211ENST00000606066 PCDHA6Q9UN73 950 aa16.34■□□□□ 0.21
CTSA-211ENST00000606066 PCDHA8Q9Y5H6 950 aa16.34■□□□□ 0.21
CTSA-211ENST00000606066 CUL9Q8IWT3 2517 aa16.33■□□□□ 0.2
CTSA-211ENST00000606066 SOX1O00570 391 aaPredicted RBP16.33■□□□□ 0.2
CTSA-211ENST00000606066 MYCLP12524 364 aaPredicted RBP16.33■□□□□ 0.2
CTSA-211ENST00000606066 MNX1P50219 401 aaPredicted RBP16.33■□□□□ 0.2
CTSA-211ENST00000606066 ST3GAL1Q11201 340 aa16.33■□□□□ 0.2
CTSA-211ENST00000606066 REXO1Q8N1G1 1221 aaKnown RBP16.33■□□□□ 0.2
CTSA-211ENST00000606066 FRMPD4Q14CM0 1322 aa16.33■□□□□ 0.2
CTSA-211ENST00000606066 ZNFX1Q9P2E3 1918 aaKnown RBP16.33■□□□□ 0.2
CTSA-211ENST00000606066 SMCHD1A6NHR9 2005 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 JAK2O60674 1132 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 DUSP11O75319 330 aaKnown RBP16.32■□□□□ 0.2
CTSA-211ENST00000606066 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
CTSA-211ENST00000606066 MYH6P13533 1939 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 FDPSP14324 419 aaKnown RBP16.32■□□□□ 0.2
CTSA-211ENST00000606066 CLK2P49760 499 aaKnown RBP16.32■□□□□ 0.2
CTSA-211ENST00000606066 TNFAIP2Q03169 654 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 TRIM29Q14134 588 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 PCNX4Q63HM2 1172 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 TAPT1Q6NXT6 567 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 FAM184AQ8NB25 1140 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 ARRDC4Q8NCT1 418 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 DIS3LQ8TF46 1054 aaKnown RBP16.32■□□□□ 0.2
CTSA-211ENST00000606066 SCFD2Q8WU76 684 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 AIFM3Q96NN9 605 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 SPC25Q9HBM1 224 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 PCDHA4Q9UN74 947 aa16.32■□□□□ 0.2
CTSA-211ENST00000606066 DDX49Q9Y6V7 483 aaKnown RBP16.32■□□□□ 0.2
CTSA-211ENST00000606066 RBM47A0AV96 593 aaKnown RBP16.31■□□□□ 0.2
CTSA-211ENST00000606066 ADCYAP1R1P41586 468 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 TTLL4Q14679 1199 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 LRIT3Q3SXY7 679 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 GNPTABQ3T906 1256 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 JAKMIP3Q5VZ66 844 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 KCNV1Q6PIU1 500 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 SEPT14Q6ZU15 432 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 LRCH3Q96II8 777 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 WDR11Q9BZH6 1224 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 XPNPEP3Q9NQH7 507 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 PDGFCQ9NRA1 345 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 KIF3AQ9Y496 699 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.31■□□□□ 0.2
CTSA-211ENST00000606066 PLXNA1Q9UIW2 1896 aa16.31■□□□□ 0.2
CTSA-211ENST00000606066 DLL1O00548 723 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 NKRFO15226 690 aaKnown RBP eCLIP16.3■□□□□ 0.2
CTSA-211ENST00000606066 DUSP28Q4G0W2 176 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 RNF180Q86T96 592 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 NLRX1Q86UT6 975 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 BLIDQ8IZY5 108 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 DAGLBQ8NCG7 672 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 PHF20Q9BVI0 1012 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 ANO3Q9BYT9 981 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 C11orf49Q9H6J7 331 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 BRMS1Q9HCU9 246 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 TMEM260Q9NX78 707 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 Q9Y3F1 56 aa16.3■□□□□ 0.2
CTSA-211ENST00000606066 TXNP10599 105 aaKnown RBP16.29■□□□□ 0.2
CTSA-211ENST00000606066 TGFB3P10600 412 aa16.29■□□□□ 0.2
CTSA-211ENST00000606066 SMPD1P17405 629 aa16.29■□□□□ 0.2
CTSA-211ENST00000606066 IL31RAQ8NI17 732 aa16.29■□□□□ 0.2
CTSA-211ENST00000606066 SNX21Q969T3 373 aa16.29■□□□□ 0.2
CTSA-211ENST00000606066 CDHR1Q96JP9 859 aa16.29■□□□□ 0.2
CTSA-211ENST00000606066 AP5M1Q9H0R1 490 aa16.29■□□□□ 0.2
CTSA-211ENST00000606066 KCNJ14Q9UNX9 436 aa16.29■□□□□ 0.2
CTSA-211ENST00000606066 MRVI1Q9Y6F6 885 aa16.29■□□□□ 0.2
CTSA-211ENST00000606066 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.28■□□□□ 0.2
CTSA-211ENST00000606066 DTNBO60941 627 aa16.28■□□□□ 0.2
CTSA-211ENST00000606066 SREBF1P36956 1147 aa16.28■□□□□ 0.2
CTSA-211ENST00000606066 MRPS9P82933 396 aaKnown RBP16.28■□□□□ 0.2
CTSA-211ENST00000606066 PGBD1Q96JS3 809 aa16.28■□□□□ 0.2
CTSA-211ENST00000606066 C8orf76Q96K31 380 aa16.28■□□□□ 0.2
CTSA-211ENST00000606066 INPP4AQ96PE3 977 aaPredicted RBP16.28■□□□□ 0.2
CTSA-211ENST00000606066 RTEL1Q9NZ71 1219 aa16.28■□□□□ 0.2
CTSA-211ENST00000606066 GNEQ9Y223 722 aaKnown RBP16.28■□□□□ 0.2
CTSA-211ENST00000606066 KBTBD13C9JR72 458 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 K7ELQ4 463 aaPredicted RBP16.27■□□□□ 0.2
CTSA-211ENST00000606066 DNM1LO00429 736 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 MAFGO15525 162 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 DYNC1LI2O43237 492 aaPredicted RBP16.27■□□□□ 0.2
CTSA-211ENST00000606066 FIBPO43427 364 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
CTSA-211ENST00000606066 COL6A1P12109 1028 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 ICAM3P32942 547 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 KRT2P35908 639 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 ZNF76P36508 570 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 GJA9P57773 515 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 ARHGAP4P98171 946 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 SAFBQ15424 915 aaKnown RBP eCLIP16.27■□□□□ 0.2
CTSA-211ENST00000606066 BRDTQ58F21 947 aaPredicted RBP16.27■□□□□ 0.2
CTSA-211ENST00000606066 CCDC62Q6P9F0 684 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 KRT25Q7Z3Z0 450 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 TLK2Q86UE8 772 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 HSCBQ8IWL3 235 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms