RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 HOXA13P31271 388 aaPredicted RBP10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 ANTXR2P58335 489 aa10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 ARHGAP1Q07960 439 aa10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 TROAPQ12815 778 aa10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 SLC35G1Q2M3R5 365 aa10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 NFRKBQ6P4R8 1299 aa10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 OTOP2Q7RTS6 562 aa10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 SAMD3Q8N6K7 520 aa10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 PIBF1Q8WXW3 757 aa10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 TIFAQ96CG3 184 aa10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 MTIF3Q9H2K0 278 aaKnown RBP10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 ZNF576Q9H609 170 aa10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 CXXC1Q9P0U4 656 aaPredicted RBP10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 DDX41Q9UJV9 622 aaKnown RBP10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 MRVI1Q9Y6F6 885 aa10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 NCOR1O75376 2440 aa10.28□□□□□ -0.76
ARHGEF1-215ENST00000598444 GCOM1H8Y6P7 765 aaPredicted RBP10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 CYTH3O43739 400 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 MMP3P08254 477 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 POLR2MP0CAP2 368 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 CASTP20810 708 aaKnown RBP10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 PBX2P40425 430 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 GHRHRQ02643 423 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 PTPN11Q06124 597 aaPredicted RBP10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 GRIN2CQ14957 1233 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 DGKDQ16760 1214 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 CASC1Q6TDU7 716 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 DEFB128Q7Z7B8 93 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 VSIG10LQ86VR7 867 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 FCHSD1Q86WN1 690 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 DHX37Q8IY37 1157 aaKnown RBP10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 MB21D2Q8IYB1 491 aaPredicted RBP10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 RETREG2Q8NC44 543 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 MAFAQ8NHW3 353 aaPredicted RBP10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 PDCD2LQ9BRP1 358 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 PBX4Q9BYU1 374 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 MSRAQ9UJ68 235 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 NOD1Q9Y239 953 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 PTPRSQ13332 1948 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 REV3LO60673 3130 aa10.27□□□□□ -0.77
ARHGEF1-215ENST00000598444 ZBBXA8MT70 800 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 PRC1O43663 620 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 FOSL2P15408 326 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 MCM5P33992 734 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 LAMC2Q13753 1193 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 PGM5Q15124 567 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 KCNV1Q6PIU1 500 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 NFXL1Q6ZNB6 911 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 TMTC2Q8N394 836 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 CTCFLQ8NI51 663 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 EMID1Q96A84 441 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 VWCEQ96DN2 955 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 ZFP91Q96JP5 570 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 MAP3K14Q99558 947 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 ESYT1Q9BSJ8 1104 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 MYL10Q9BUA6 226 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 LSG1Q9H089 658 aaKnown RBP10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 LY9Q9HBG7 655 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 SLC4A7Q9Y6M7 1214 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 TTC28Q96AY4 2481 aa10.26□□□□□ -0.77
ARHGEF1-215ENST00000598444 CCDC69A6NI79 296 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 PITPNM1O00562 1244 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 SLC27A2O14975 620 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 SORBS3O60504 671 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 RGS20O76081 388 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 IQCF3P0C7M6 154 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 TGFB3P10600 412 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 CCND2P30279 289 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 KIF5BP33176 963 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 BFSP2Q13515 415 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 RAB30Q15771 203 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 PTGISQ16647 500 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 MYSM1Q5VVJ2 828 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 GDF6Q6KF10 455 aaPredicted RBP10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 IL31RAQ8NI17 732 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 KAT2BQ92831 832 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 RRP36Q96EU6 259 aaKnown RBP10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 TMEM87BQ96K49 555 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 ALG1Q9BT22 464 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 MTA3Q9BTC8 594 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 ANO2Q9NQ90 1003 aa10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 PRRC2BQ5JSZ5 2229 aaKnown RBP10.25□□□□□ -0.77
ARHGEF1-215ENST00000598444 PPFIA4O75335 1185 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 DDAH1O94760 285 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 GGPS1O95749 300 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 PFKMP08237 780 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 ACTN1P12814 892 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 SMARCA1P28370 1054 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 RFC2P35250 354 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 PSEN2P49810 448 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 GNAQP50148 359 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 RABGGTBP53611 331 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 SP2Q02086 613 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 COL9A3Q14050 684 aaPredicted RBP10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 NECTIN1Q15223 517 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 CELF3Q5SZQ8 465 aaKnown RBP10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 CREB3L3Q68CJ9 461 aa10.24□□□□□ -0.77
ARHGEF1-215ENST00000598444 SESTD1Q86VW0 696 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms