RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 KRT2P35908 639 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 MCTP1Q6DN14 999 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 MAMDC4Q6UXC1 1216 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 ARMCX2Q7L311 632 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 ZNF467Q7Z7K2 595 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-220ENST00000593008 BLIDQ8IZY5 108 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 ZNF713Q8N859 430 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-220ENST00000593008 DAGLBQ8NCG7 672 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 CUL5Q93034 780 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 ANO3Q9BYT9 981 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 FTOQ9C0B1 505 aaKnown RBP eCLIP11.04□□□□□ -0.64
DDX39A-220ENST00000593008 SENP6Q9GZR1 1112 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-220ENST00000593008 SH3GLB2Q9NR46 395 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-220ENST00000593008 PFASO15067 1338 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 SYNGAP1Q96PV0 1343 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 GCOM1H8Y6P7 765 aaPredicted RBP11.03□□□□□ -0.64
DDX39A-220ENST00000593008 PGK1P00558 417 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 POLR2MP0CAP2 368 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 RARBP10826 455 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 AKR1A1P14550 325 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 CAPN2P17655 700 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 GHRHRQ02643 423 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 ACVR2BQ13705 512 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 TRIM29Q14134 588 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 PIK3AP1Q6ZUJ8 805 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 EEPD1Q7L9B9 569 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 C7orf61Q8IZ16 206 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 REXO1Q8N1G1 1221 aaKnown RBP11.03□□□□□ -0.64
DDX39A-220ENST00000593008 MSL3Q8N5Y2 521 aaKnown RBP11.03□□□□□ -0.64
DDX39A-220ENST00000593008 C6orf50Q9HD87 102 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 XPNPEP3Q9NQH7 507 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 NRBP1Q9UHY1 535 aa11.03□□□□□ -0.64
DDX39A-220ENST00000593008 CEP290O15078 2479 aa11.02□□□□□ -0.64
DDX39A-220ENST00000593008 ZNFX1Q9P2E3 1918 aaKnown RBP11.02□□□□□ -0.65
DDX39A-220ENST00000593008 DNAH12Q6ZR08 3092 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 DNM1LO00429 736 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 ADCY6O43306 1168 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 TDP2O95551 362 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 BRD1O95696 1058 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 COL6A1P12109 1028 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 ATP2B1P20020 1258 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 ATN1P54259 1190 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-220ENST00000593008 LRRC41Q15345 812 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 INF2Q27J81 1249 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 LRRC26Q2I0M4 334 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 CCDC144BQ3MJ40 725 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 TMEM63BQ5T3F8 832 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 ARRDC4Q8NCT1 418 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 GJA10Q969M2 543 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 FERMT2Q96AC1 680 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 DAXXQ9UER7 740 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-220ENST00000593008 PNMA2Q9UL42 364 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 FAM184BQ9ULE4 1060 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 MRVI1Q9Y6F6 885 aa11.02□□□□□ -0.65
DDX39A-220ENST00000593008 ASB14A6NK59 587 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 KBTBD13C9JR72 458 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 PIK3CDO00329 1044 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 F13A1P00488 732 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 ZSCAN22P10073 491 aaPredicted RBP11.01□□□□□ -0.65
DDX39A-220ENST00000593008 ADCYAP1R1P41586 468 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 TOB1P50616 345 aaPredicted RBP11.01□□□□□ -0.65
DDX39A-220ENST00000593008 ALDH5A1P51649 535 aaPredicted RBP11.01□□□□□ -0.65
DDX39A-220ENST00000593008 IRX5P78411 483 aaPredicted RBP11.01□□□□□ -0.65
DDX39A-220ENST00000593008 FBXO16Q8IX29 292 aaPredicted RBP11.01□□□□□ -0.65
DDX39A-220ENST00000593008 CYP2W1Q8TAV3 490 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 TBCKQ8TEA7 893 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 CCDC12Q8WUD4 166 aaPredicted RBP11.01□□□□□ -0.65
DDX39A-220ENST00000593008 RMDN3Q96TC7 470 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 KATNBL1Q9H079 304 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 ABHD16BQ9H3Z7 469 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 PXMP2Q9NR77 195 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 PDGFCQ9NRA1 345 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 ZMYND8Q9ULU4 1186 aaPredicted RBP11.01□□□□□ -0.65
DDX39A-220ENST00000593008 NR2E3Q9Y5X4 410 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 PLXNA1Q9UIW2 1896 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 FRMPD4Q14CM0 1322 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 MCM3APO60318 1980 aa11.01□□□□□ -0.65
DDX39A-220ENST00000593008 MYH7BA7E2Y1 1941 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 C11orf97A0A1B0GVM6 126 aaPredicted RBP11□□□□□ -0.65
DDX39A-220ENST00000593008 MYADML2A6NDP7 307 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 SPDYE3A6NKU9 549 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 SORBS3O60504 671 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 MYCLP12524 364 aaPredicted RBP11□□□□□ -0.65
DDX39A-220ENST00000593008 SYN1P17600 705 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 XBP1P17861 261 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 GNA11P29992 359 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 MRPL12P52815 198 aaKnown RBP11□□□□□ -0.65
DDX39A-220ENST00000593008 MRPS9P82933 396 aaKnown RBP11□□□□□ -0.65
DDX39A-220ENST00000593008 TRAF1Q13077 416 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 PGM5Q15124 567 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 MCF2L2Q86YR7 1114 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 NOSTRINQ8IVI9 506 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 CRYGNQ8WXF5 182 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 PDCD2LQ9BRP1 358 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 PKD2L1Q9P0L9 805 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 KIF3AQ9Y496 699 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 TELO2Q9Y4R8 837 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 SYNRGQ9UMZ2 1314 aa11□□□□□ -0.65
DDX39A-220ENST00000593008 CCDC194A0A1B0GVG4 234 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms