RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 HMGCRP04035 888 aa20.91■□□□□ 0.94
CROCCP3-205ENST00000591316 U2AF2P26368 475 aaKnown RBP eCLIP20.91■□□□□ 0.94
CROCCP3-205ENST00000591316 CACNB2Q08289 660 aaPredicted RBP20.91■□□□□ 0.94
CROCCP3-205ENST00000591316 ACVR2BQ13705 512 aa20.91■□□□□ 0.94
CROCCP3-205ENST00000591316 PKP1Q13835 747 aa20.91■□□□□ 0.94
CROCCP3-205ENST00000591316 PCNX4Q63HM2 1172 aa20.91■□□□□ 0.94
CROCCP3-205ENST00000591316 NOSTRINQ8IVI9 506 aa20.91■□□□□ 0.94
CROCCP3-205ENST00000591316 EIF3JO75822 258 aaKnown RBP20.9■□□□□ 0.94
CROCCP3-205ENST00000591316 INHAP05111 366 aa20.9■□□□□ 0.94
CROCCP3-205ENST00000591316 CNGA1P29973 690 aa20.9■□□□□ 0.94
CROCCP3-205ENST00000591316 LETM2Q2VYF4 491 aa20.9■□□□□ 0.94
CROCCP3-205ENST00000591316 CYP2W1Q8TAV3 490 aa20.9■□□□□ 0.94
CROCCP3-205ENST00000591316 MORC4Q8TE76 937 aa20.9■□□□□ 0.94
CROCCP3-205ENST00000591316 IPO9Q96P70 1041 aaKnown RBP20.9■□□□□ 0.94
CROCCP3-205ENST00000591316 ABHD16BQ9H3Z7 469 aa20.9■□□□□ 0.94
CROCCP3-205ENST00000591316 PDGFCQ9NRA1 345 aa20.9■□□□□ 0.94
CROCCP3-205ENST00000591316 FRMPD4Q14CM0 1322 aa20.9■□□□□ 0.94
CROCCP3-205ENST00000591316 ZNF236Q9UL36 1845 aa20.9■□□□□ 0.94
CROCCP3-205ENST00000591316 PLXNA1Q9UIW2 1896 aa20.9■□□□□ 0.94
CROCCP3-205ENST00000591316 LCTP09848 1927 aa20.89■□□□□ 0.94
CROCCP3-205ENST00000591316 LOC102724159A0A0B4J2E5 919 aa20.89■□□□□ 0.94
CROCCP3-205ENST00000591316 EDIL3O43854 480 aa20.89■□□□□ 0.94
CROCCP3-205ENST00000591316 IGHA2P01877 340 aa20.89■□□□□ 0.94
CROCCP3-205ENST00000591316 PRKAR2AP13861 404 aaKnown RBP20.89■□□□□ 0.94
CROCCP3-205ENST00000591316 PWP2Q15269 919 aaKnown RBP20.89■□□□□ 0.94
CROCCP3-205ENST00000591316 RBBP6Q7Z6E9 1792 aaKnown RBP20.89■□□□□ 0.94
CROCCP3-205ENST00000591316 CENPFP49454 3210 aa20.89■□□□□ 0.93
CROCCP3-205ENST00000591316 USP11P51784 963 aa20.89■□□□□ 0.93
CROCCP3-205ENST00000591316 NEK8Q86SG6 692 aa20.89■□□□□ 0.93
CROCCP3-205ENST00000591316 UIMC1Q96RL1 719 aa20.89■□□□□ 0.93
CROCCP3-205ENST00000591316 WDR11Q9BZH6 1224 aa20.89■□□□□ 0.93
CROCCP3-205ENST00000591316 MCOLN1Q9GZU1 580 aa20.89■□□□□ 0.93
CROCCP3-205ENST00000591316 CCNT1O60563 726 aaKnown RBP20.88■□□□□ 0.93
CROCCP3-205ENST00000591316 CYP3A4P08684 503 aa20.88■□□□□ 0.93
CROCCP3-205ENST00000591316 CCND3P30281 292 aaPredicted RBP20.88■□□□□ 0.93
CROCCP3-205ENST00000591316 XRRA1Q6P2D8 792 aa20.88■□□□□ 0.93
CROCCP3-205ENST00000591316 TRPV1Q8NER1 839 aa20.88■□□□□ 0.93
CROCCP3-205ENST00000591316 CRYGNQ8WXF5 182 aa20.88■□□□□ 0.93
CROCCP3-205ENST00000591316 MXRA8Q9BRK3 442 aa20.88■□□□□ 0.93
CROCCP3-205ENST00000591316 KATNBL1Q9H079 304 aa20.88■□□□□ 0.93
CROCCP3-205ENST00000591316 FAM86B1E9PN63 330 aa20.87■□□□□ 0.93
CROCCP3-205ENST00000591316 RGS20O76081 388 aa20.87■□□□□ 0.93
CROCCP3-205ENST00000591316 FAM86B2P0C5J1 330 aa20.87■□□□□ 0.93
CROCCP3-205ENST00000591316 ZNF865P0CJ78 1059 aaPredicted RBP20.87■□□□□ 0.93
CROCCP3-205ENST00000591316 ITGB5P18084 799 aa20.87■□□□□ 0.93
CROCCP3-205ENST00000591316 CCDC144BQ3MJ40 725 aa20.87■□□□□ 0.93
CROCCP3-205ENST00000591316 CEP55Q53EZ4 464 aa20.87■□□□□ 0.93
CROCCP3-205ENST00000591316 ANO1Q5XXA6 986 aa20.87■□□□□ 0.93
CROCCP3-205ENST00000591316 TAPT1Q6NXT6 567 aa20.87■□□□□ 0.93
CROCCP3-205ENST00000591316 VTA1Q9NP79 307 aa20.87■□□□□ 0.93
CROCCP3-205ENST00000591316 TDP2O95551 362 aa20.86■□□□□ 0.93
CROCCP3-205ENST00000591316 ZSCAN22P10073 491 aaPredicted RBP20.86■□□□□ 0.93
CROCCP3-205ENST00000591316 PDIA4P13667 645 aaKnown RBP20.86■□□□□ 0.93
CROCCP3-205ENST00000591316 ADCYAP1R1P41586 468 aa20.86■□□□□ 0.93
CROCCP3-205ENST00000591316 FOXD4L6Q3SYB3 417 aaPredicted RBP20.86■□□□□ 0.93
CROCCP3-205ENST00000591316 PRR16Q569H4 304 aa20.86■□□□□ 0.93
CROCCP3-205ENST00000591316 TMEM63BQ5T3F8 832 aa20.86■□□□□ 0.93
CROCCP3-205ENST00000591316 FAM173BQ6P4H8 233 aa20.86■□□□□ 0.93
CROCCP3-205ENST00000591316 FOXD4L3Q6VB84 417 aaPredicted RBP20.86■□□□□ 0.93
CROCCP3-205ENST00000591316 NLRX1Q86UT6 975 aa20.86■□□□□ 0.93
CROCCP3-205ENST00000591316 JADE2Q9NQC1 790 aa20.86■□□□□ 0.93
CROCCP3-205ENST00000591316 UBIAD1Q9Y5Z9 338 aa20.86■□□□□ 0.93
CROCCP3-205ENST00000591316 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 WNT7AO00755 349 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 STAM2O75886 525 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 CYBAP13498 195 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 NBR1Q14596 966 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 MTFR1Q15390 333 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 ZNF174Q15697 407 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 GNPTABQ3T906 1256 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 PLA2G4DQ86XP0 818 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 HMX1Q9NP08 348 aaPredicted RBP20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 PKD2L1Q9P0L9 805 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 NOL7Q9UMY1 257 aaKnown RBP20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 MRVI1Q9Y6F6 885 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 SORBS3O60504 671 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 ARP10275 920 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 RESTQ13127 1097 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 MTMR1Q13613 665 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 LY6KQ17RY6 165 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 COL13A1Q5TAT6 717 aaPredicted RBP20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 MAP3K21Q5TCX8 1036 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 INPP4AQ96PE3 977 aaPredicted RBP20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 FAM184BQ9ULE4 1060 aa20.85■□□□□ 0.93
CROCCP3-205ENST00000591316 MCM3APO60318 1980 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 HTTP42858 3142 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 MEIS1O00470 390 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 TXNP10599 105 aaKnown RBP20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 PTGS1P23219 599 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 CIITAP33076 1130 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 MCM7P33993 719 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 TOB1P50616 345 aaPredicted RBP20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 TNFAIP2Q03169 654 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 IQSEC1Q6DN90 963 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 BRAPQ7Z569 592 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 SCFD2Q8WU76 684 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 UNC93B1Q9H1C4 597 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 ZSCAN16Q9H4T2 348 aaPredicted RBP20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 KCNH7Q9NS40 1196 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 DDX25Q9UHL0 483 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms