RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 HOXA13P31271 388 aaPredicted RBP19.65■□□□□ 0.74
TRIM47-203ENST00000586495 ARHGAP1Q07960 439 aa19.65■□□□□ 0.74
TRIM47-203ENST00000586495 SLC35G1Q2M3R5 365 aa19.65■□□□□ 0.74
TRIM47-203ENST00000586495 TMEM87BQ96K49 555 aa19.65■□□□□ 0.74
TRIM47-203ENST00000586495 WNT8AQ9H1J5 351 aa19.65■□□□□ 0.74
TRIM47-203ENST00000586495 LY9Q9HBG7 655 aa19.65■□□□□ 0.74
TRIM47-203ENST00000586495 NOD1Q9Y239 953 aa19.65■□□□□ 0.74
TRIM47-203ENST00000586495 CCDC69A6NI79 296 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 PFKMP08237 780 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 SMARCA1P28370 1054 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 GNAQP50148 359 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 LAMC2Q13753 1193 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 PGM5Q15124 567 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 DGKDQ16760 1214 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 NFXL1Q6ZNB6 911 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 DHX37Q8IY37 1157 aaKnown RBP19.64■□□□□ 0.73
TRIM47-203ENST00000586495 ZNF654Q8IZM8 581 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 EMID1Q96A84 441 aaPredicted RBP19.64■□□□□ 0.73
TRIM47-203ENST00000586495 TIFAQ96CG3 184 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 LZTS2Q9BRK4 669 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 ANO2Q9NQ90 1003 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 KIAA1217Q5T5P2 1943 aa19.64■□□□□ 0.73
TRIM47-203ENST00000586495 BAZ2BQ9UIF8 2168 aaKnown RBP19.63■□□□□ 0.73
TRIM47-203ENST00000586495 SLC27A2O14975 620 aa19.63■□□□□ 0.73
TRIM47-203ENST00000586495 CCND2P30279 289 aa19.63■□□□□ 0.73
TRIM47-203ENST00000586495 CHMP4BP1P59074 171 aa19.63■□□□□ 0.73
TRIM47-203ENST00000586495 BMP2KLQ5H9B9 411 aa19.63■□□□□ 0.73
TRIM47-203ENST00000586495 OTOP2Q7RTS6 562 aa19.63■□□□□ 0.73
TRIM47-203ENST00000586495 VSIG10LQ86VR7 867 aa19.63■□□□□ 0.73
TRIM47-203ENST00000586495 FCHSD1Q86WN1 690 aa19.63■□□□□ 0.73
TRIM47-203ENST00000586495 RETREG2Q8NC44 543 aa19.63■□□□□ 0.73
TRIM47-203ENST00000586495 RRP36Q96EU6 259 aaKnown RBP19.63■□□□□ 0.73
TRIM47-203ENST00000586495 SCLYQ96I15 445 aa19.63■□□□□ 0.73
TRIM47-203ENST00000586495 SPZ1Q9BXG8 430 aa19.63■□□□□ 0.73
TRIM47-203ENST00000586495 COL6A3P12111 3177 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 PITPNM1O00562 1244 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 SH2B2O14492 632 aaPredicted RBP19.62■□□□□ 0.73
TRIM47-203ENST00000586495 CALM1P0DP23 149 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 CALM2P0DP24 149 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 CALM3P0DP25 149 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 TGFB3P10600 412 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 BFSP2Q13515 415 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 NECTIN1Q15223 517 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 RAB30Q15771 203 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 CREB3L3Q68CJ9 461 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 PPTC7Q8NI37 304 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 PIBF1Q8WXW3 757 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 MYLIPQ8WY64 445 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 KATNAL1Q9BW62 490 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 PBX4Q9BYU1 374 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 ZNF576Q9H609 170 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 SEC63Q9UGP8 760 aaKnown RBP19.62■□□□□ 0.73
TRIM47-203ENST00000586495 MSRAQ9UJ68 235 aa19.62■□□□□ 0.73
TRIM47-203ENST00000586495 LAMA2P24043 3122 aaKnown RBP19.62■□□□□ 0.73
TRIM47-203ENST00000586495 FOSL2P15408 326 aa19.61■□□□□ 0.73
TRIM47-203ENST00000586495 RFC2P35250 354 aa19.61■□□□□ 0.73
TRIM47-203ENST00000586495 LIFRP42702 1097 aa19.61■□□□□ 0.73
TRIM47-203ENST00000586495 RNF20Q5VTR2 975 aa19.61■□□□□ 0.73
TRIM47-203ENST00000586495 SESTD1Q86VW0 696 aa19.61■□□□□ 0.73
TRIM47-203ENST00000586495 CCDC155Q8N6L0 562 aa19.61■□□□□ 0.73
TRIM47-203ENST00000586495 MYL10Q9BUA6 226 aa19.61■□□□□ 0.73
TRIM47-203ENST00000586495 CXXC1Q9P0U4 656 aaPredicted RBP19.61■□□□□ 0.73
TRIM47-203ENST00000586495 GRXCR1A8MXD5 290 aa19.6■□□□□ 0.73
TRIM47-203ENST00000586495 RGS20O76081 388 aa19.6■□□□□ 0.73
TRIM47-203ENST00000586495 PTGISQ16647 500 aa19.6■□□□□ 0.73
TRIM47-203ENST00000586495 MAFAQ8NHW3 353 aaPredicted RBP19.6■□□□□ 0.73
TRIM47-203ENST00000586495 PPP1R13LQ8WUF5 828 aa19.6■□□□□ 0.73
TRIM47-203ENST00000586495 KAT2BQ92831 832 aa19.6■□□□□ 0.73
TRIM47-203ENST00000586495 CUL5Q93034 780 aa19.6■□□□□ 0.73
TRIM47-203ENST00000586495 SLC4A7Q9Y6M7 1214 aa19.6■□□□□ 0.73
TRIM47-203ENST00000586495 ZBBXA8MT70 800 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 PPFIA4O75335 1185 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 STAM2O75886 525 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 IQCF3P0C7M6 154 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 ACTN1P12814 892 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 PSEN2P49810 448 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 GRIN2CQ14957 1233 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 GNPTABQ3T906 1256 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 CELF3Q5SZQ8 465 aaKnown RBP19.59■□□□□ 0.73
TRIM47-203ENST00000586495 MYSM1Q5VVJ2 828 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 DEFB128Q7Z7B8 93 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 C7orf31Q8N865 590 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 IL31RAQ8NI17 732 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 SMARCC2Q8TAQ2 1214 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 CAGE1Q8TC20 777 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 SPATA33Q96N06 139 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 SLC12A7Q9Y666 1083 aa19.59■□□□□ 0.73
TRIM47-203ENST00000586495 DLL1O00548 723 aa19.58■□□□□ 0.72
TRIM47-203ENST00000586495 GGPS1O95749 300 aa19.58■□□□□ 0.72
TRIM47-203ENST00000586495 PBX2P40425 430 aa19.58■□□□□ 0.72
TRIM47-203ENST00000586495 SYNE3Q6ZMZ3 975 aa19.58■□□□□ 0.72
TRIM47-203ENST00000586495 ALG1Q9BT22 464 aa19.58■□□□□ 0.72
TRIM47-203ENST00000586495 MLXIPQ9HAP2 919 aa19.58■□□□□ 0.72
TRIM47-203ENST00000586495 GTF2IRD1Q9UHL9 959 aa19.58■□□□□ 0.72
TRIM47-203ENST00000586495 F2P00734 622 aa19.57■□□□□ 0.72
TRIM47-203ENST00000586495 MFSD10Q14728 455 aa19.57■□□□□ 0.72
TRIM47-203ENST00000586495 GDF6Q6KF10 455 aaPredicted RBP19.57■□□□□ 0.72
TRIM47-203ENST00000586495 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.57■□□□□ 0.72
TRIM47-203ENST00000586495 SRBD1Q8N5C6 995 aaKnown RBP19.57■□□□□ 0.72
TRIM47-203ENST00000586495 HDAC6Q9UBN7 1215 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms